RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 KCNB2Q92953 911 aa16.29■□□□□ 0.2
TUBA1B-202ENST00000336023 EHD4Q9H223 541 aa16.29■□□□□ 0.2
TUBA1B-202ENST00000336023 SERPINB13Q9UIV8 391 aa16.29■□□□□ 0.2
TUBA1B-202ENST00000336023 CDK5RAP2Q96SN8 1893 aa16.28■□□□□ 0.2
TUBA1B-202ENST00000336023 SLURP2P0DP57 97 aa16.28■□□□□ 0.2
TUBA1B-202ENST00000336023 GABPAQ06546 454 aa16.28■□□□□ 0.2
TUBA1B-202ENST00000336023 CRACR2BQ8N4Y2 399 aaPredicted RBP16.28■□□□□ 0.2
TUBA1B-202ENST00000336023 INCENPQ9NQS7 918 aa16.28■□□□□ 0.2
TUBA1B-202ENST00000336023 BAZ2AQ9UIF9 1905 aaKnown RBP16.28■□□□□ 0.2
TUBA1B-202ENST00000336023 KIF3CO14782 793 aa16.27■□□□□ 0.2
TUBA1B-202ENST00000336023 TSGA10IPQ3SY00 556 aa16.27■□□□□ 0.2
TUBA1B-202ENST00000336023 AKNAD1Q5T1N1 836 aa16.27■□□□□ 0.2
TUBA1B-202ENST00000336023 C16orf86Q6ZW13 317 aa16.27■□□□□ 0.2
TUBA1B-202ENST00000336023 METTL16Q86W50 562 aaKnown RBP16.27■□□□□ 0.2
TUBA1B-202ENST00000336023 SLC44A5Q8NCS7 719 aa16.27■□□□□ 0.2
TUBA1B-202ENST00000336023 SNX14Q9Y5W7 946 aa16.27■□□□□ 0.2
TUBA1B-202ENST00000336023 TACC3Q9Y6A5 838 aa16.27■□□□□ 0.2
TUBA1B-202ENST00000336023 FOCADQ5VW36 1801 aa16.27■□□□□ 0.2
TUBA1B-202ENST00000336023 ROBO3Q96MS0 1386 aa16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 NAV1Q8NEY1 1877 aa16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 E7EWF7 191 aa16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 CDK8P49336 464 aa16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 RBM25P49756 843 aaKnown RBP16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 PDE4BQ07343 736 aa16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 SUPT20HL1Q3ZLR7 823 aa16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 MFSD6Q6ZSS7 791 aa16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 STOX1Q6ZVD7 989 aa16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 MIGA2Q7L4E1 593 aa16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 ZNF784Q8NCA9 323 aaPredicted RBP16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 STAG1Q8WVM7 1258 aa16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 TBC1D32Q96NH3 1257 aa16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 TRIM34Q9BYJ4 488 aa16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 RNF41Q9H4P4 317 aaPredicted RBP16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 HERC5Q9UII4 1024 aaKnown RBP16.27■□□□□ 0.19
TUBA1B-202ENST00000336023 DDX60LQ5H9U9 1706 aaKnown RBP16.26■□□□□ 0.19
TUBA1B-202ENST00000336023 FAM196BA6NMK8 535 aa16.26■□□□□ 0.19
TUBA1B-202ENST00000336023 FGRP09769 529 aa16.26■□□□□ 0.19
TUBA1B-202ENST00000336023 ANAPC15P60006 121 aa16.26■□□□□ 0.19
TUBA1B-202ENST00000336023 CHADLQ6NUI6 762 aa16.26■□□□□ 0.19
TUBA1B-202ENST00000336023 HOOK2Q96ED9 719 aa16.26■□□□□ 0.19
TUBA1B-202ENST00000336023 CDCA5Q96FF9 252 aa16.26■□□□□ 0.19
TUBA1B-202ENST00000336023 DNAJC18Q9H819 358 aa16.26■□□□□ 0.19
TUBA1B-202ENST00000336023 MKNK2Q9HBH9 465 aa16.26■□□□□ 0.19
TUBA1B-202ENST00000336023 SWAP70Q9UH65 585 aa16.26■□□□□ 0.19
TUBA1B-202ENST00000336023 TBC1D12O60347 775 aa16.25■□□□□ 0.19
TUBA1B-202ENST00000336023 PRDM1O75626 825 aa16.25■□□□□ 0.19
TUBA1B-202ENST00000336023 PCP11498 1178 aaKnown RBP16.25■□□□□ 0.19
TUBA1B-202ENST00000336023 MAP3K10Q02779 954 aa16.25■□□□□ 0.19
TUBA1B-202ENST00000336023 KRT32Q14532 448 aa16.25■□□□□ 0.19
TUBA1B-202ENST00000336023 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.25■□□□□ 0.19
TUBA1B-202ENST00000336023 ZNF287Q9HBT7 754 aa16.25■□□□□ 0.19
TUBA1B-202ENST00000336023 TOMM22Q9NS69 142 aa16.25■□□□□ 0.19
TUBA1B-202ENST00000336023 TAOK2Q9UL54 1235 aa16.25■□□□□ 0.19
TUBA1B-202ENST00000336023 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.25■□□□□ 0.19
TUBA1B-202ENST00000336023 MYH1P12882 1939 aa16.25■□□□□ 0.19
TUBA1B-202ENST00000336023 TRAF5O00463 557 aa16.24■□□□□ 0.19
TUBA1B-202ENST00000336023 SHMT1P34896 483 aa16.24■□□□□ 0.19
TUBA1B-202ENST00000336023 TRDNQ13061 729 aa16.24■□□□□ 0.19
TUBA1B-202ENST00000336023 ADCK5Q3MIX3 580 aa16.24■□□□□ 0.19
TUBA1B-202ENST00000336023 RRP12Q5JTH9 1297 aaKnown RBP16.24■□□□□ 0.19
TUBA1B-202ENST00000336023 NEDD4P46934 1319 aa16.24■□□□□ 0.19
TUBA1B-202ENST00000336023 POLR2AP24928 1970 aaKnown RBP16.24■□□□□ 0.19
TUBA1B-202ENST00000336023 ORC4O43929 436 aa16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 DCAF15Q66K64 600 aa16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 JAKMIP1Q96N16 626 aaKnown RBP16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 CNNM2Q9H8M5 875 aa16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 RASA1P20936 1047 aa16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 NF2P35240 595 aa16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 FMR1Q06787 632 aaKnown RBP eCLIP16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 TATDN1Q6P1N9 297 aa16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 RALYLQ86SE5 291 aaKnown RBP16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 ZNF444Q8N0Y2 327 aaPredicted RBP16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 NCOA7Q8NI08 942 aa16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 NKX2-3Q8TAU0 364 aa16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 IL17RAQ96F46 866 aa16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 NEK1Q96PY6 1258 aa16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 KRT23Q9C075 422 aa16.23■□□□□ 0.19
TUBA1B-202ENST00000336023 B4E1Z4 1266 aa16.22■□□□□ 0.19
TUBA1B-202ENST00000336023 RANBP6O60518 1105 aaKnown RBP16.22■□□□□ 0.19
TUBA1B-202ENST00000336023 ITGBL1O95965 494 aaPredicted RBP16.22■□□□□ 0.19
TUBA1B-202ENST00000336023 CERKLQ49MI3 558 aaPredicted RBP16.22■□□□□ 0.19
TUBA1B-202ENST00000336023 ESR2Q92731 530 aa16.22■□□□□ 0.19
TUBA1B-202ENST00000336023 KIF2CQ99661 725 aa16.22■□□□□ 0.19
TUBA1B-202ENST00000336023 ZNF341Q9BYN7 854 aa16.22■□□□□ 0.19
TUBA1B-202ENST00000336023 FZD1Q9UP38 647 aa16.22■□□□□ 0.19
TUBA1B-202ENST00000336023 SSC5DA1L4H1 1573 aa16.22■□□□□ 0.19
TUBA1B-202ENST00000336023 PPP1R12BO60237 982 aaPredicted RBP16.21■□□□□ 0.19
TUBA1B-202ENST00000336023 KDM4AO75164 1064 aa16.21■□□□□ 0.19
TUBA1B-202ENST00000336023 TOMM70O94826 608 aa16.21■□□□□ 0.19
TUBA1B-202ENST00000336023 PSMA5P28066 241 aa16.21■□□□□ 0.19
TUBA1B-202ENST00000336023 PRKG1Q13976 671 aa16.21■□□□□ 0.19
TUBA1B-202ENST00000336023 COL9A3Q14050 684 aaPredicted RBP16.21■□□□□ 0.19
TUBA1B-202ENST00000336023 RRP1BQ14684 758 aaKnown RBP16.21■□□□□ 0.19
TUBA1B-202ENST00000336023 FAM47AQ5JRC9 791 aa16.21■□□□□ 0.19
TUBA1B-202ENST00000336023 PHF20L1A8MW92 1017 aa16.2■□□□□ 0.18
TUBA1B-202ENST00000336023 CASTP20810 708 aaKnown RBP16.2■□□□□ 0.18
TUBA1B-202ENST00000336023 TFAP4Q01664 338 aa16.2■□□□□ 0.18
TUBA1B-202ENST00000336023 MB21D2Q8IYB1 491 aaPredicted RBP16.2■□□□□ 0.18
TUBA1B-202ENST00000336023 SMC1BQ8NDV3 1235 aa16.2■□□□□ 0.18
TUBA1B-202ENST00000336023 CCDC17Q96LX7 622 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms