RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 DNM1Q05193 864 aaKnown RBP9.65□□□□□ -0.86
TDP1-201ENST00000335725 TMEM62Q0P6H9 643 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 MKRN4PQ13434 485 aaPredicted RBP9.65□□□□□ -0.86
TDP1-201ENST00000335725 SPECC1Q5M775 1068 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 ARMCX5Q6P1M9 558 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 ANKRD13BQ86YJ7 626 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 SMC1BQ8NDV3 1235 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 TAF4BQ92750 862 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 DHX58Q96C10 678 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 STAMBPL1Q96FJ0 436 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 ARHGAP6O43182 974 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 LBRQ14739 615 aaKnown RBP9.65□□□□□ -0.86
TDP1-201ENST00000335725 USH1GQ495M9 461 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 NANOGNBQ7Z5D8 188 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 CCDC12Q8WUD4 166 aaPredicted RBP9.65□□□□□ -0.86
TDP1-201ENST00000335725 ZNF653Q96CK0 615 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 SH3GL1Q99961 368 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 SUGCTQ9HAC7 445 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 DMAP1Q9NPF5 467 aaPredicted RBP9.65□□□□□ -0.86
TDP1-201ENST00000335725 DDX25Q9UHL0 483 aaKnown RBP9.65□□□□□ -0.86
TDP1-201ENST00000335725 MTMR7Q9Y216 660 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 CTAGE15A4D2H0 777 aa9.65□□□□□ -0.87
TDP1-201ENST00000335725 GOLGA8AA7E2F4 631 aa9.65□□□□□ -0.87
TDP1-201ENST00000335725 CTAGE8P0CG41 777 aa9.65□□□□□ -0.87
TDP1-201ENST00000335725 BCRP11274 1271 aa9.65□□□□□ -0.87
TDP1-201ENST00000335725 VSNL1P62760 191 aa9.65□□□□□ -0.87
TDP1-201ENST00000335725 PHEXP78562 749 aa9.65□□□□□ -0.87
TDP1-201ENST00000335725 PABPC1LQ4VXU2 614 aaKnown RBP9.65□□□□□ -0.87
TDP1-201ENST00000335725 FAAH2Q6GMR7 532 aa9.65□□□□□ -0.87
TDP1-201ENST00000335725 NAA16Q6N069 864 aaPredicted RBP9.65□□□□□ -0.87
TDP1-201ENST00000335725 NCCRP1Q6ZVX7 275 aaPredicted RBP9.65□□□□□ -0.87
TDP1-201ENST00000335725 CTAGE6Q86UF2 777 aa9.65□□□□□ -0.87
TDP1-201ENST00000335725 CTAGE4Q8IX94 777 aa9.65□□□□□ -0.87
TDP1-201ENST00000335725 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.87
TDP1-201ENST00000335725 UBE2OQ9C0C9 1292 aaKnown RBP9.65□□□□□ -0.87
TDP1-201ENST00000335725 TAOK3Q9H2K8 898 aa9.65□□□□□ -0.87
TDP1-201ENST00000335725 GOLGA6L10A0A0M3HER8 536 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 KCNA2P16389 499 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 NBPF14Q5TI25 921 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 CEP128Q6ZU80 1094 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 CCDC148Q8NFR7 591 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 COG1Q8WTW3 980 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 EPN3Q9H201 632 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 HAUS2Q9NVX0 235 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 NLRP2Q9NX02 1062 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 PPIP5K1Q6PFW1 1433 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 TCHHQ07283 1943 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 TARSL2A2RTX5 802 aaKnown RBP9.64□□□□□ -0.87
TDP1-201ENST00000335725 PALM3A6NDB9 673 aaPredicted RBP9.64□□□□□ -0.87
TDP1-201ENST00000335725 BTG3Q14201 252 aaPredicted RBP9.64□□□□□ -0.87
TDP1-201ENST00000335725 RCN1Q15293 331 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 DDX27Q96GQ7 796 aaKnown RBP9.64□□□□□ -0.87
TDP1-201ENST00000335725 TRAPPC9Q96Q05 1148 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 PPP2R2CQ9Y2T4 447 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 GPR75-ASB3A0A0A6YYF3 556 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 P4HA2O15460 535 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 DNAJC8O75937 253 aaPredicted RBP9.64□□□□□ -0.87
TDP1-201ENST00000335725 NAA35Q5VZE5 725 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 THOC7Q6I9Y2 204 aaKnown RBP9.64□□□□□ -0.87
TDP1-201ENST00000335725 BPIFA3Q9BQP9 254 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 VCXQ9H320 206 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 ASB3Q9Y575 518 aa9.64□□□□□ -0.87
TDP1-201ENST00000335725 A0A1B0GVG6 124 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 NUTM2FA1L443 756 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 VWA3AA6NCI4 1184 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 FLOT1O75955 427 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 ZNF365Q70YC5 407 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 PLEKHM2Q8IWE5 1019 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 CCAR1Q8IX12 1150 aaKnown RBP9.63□□□□□ -0.87
TDP1-201ENST00000335725 TMEM57Q8N5G2 664 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 USP33Q8TEY7 942 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 ZSWIM4Q9H7M6 989 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 ARHGEF10LQ9HCE6 1279 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 PREBQ9HCU5 417 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 SLC5A4Q9NY91 659 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 TFIP11Q9UBB9 837 aaKnown RBP9.63□□□□□ -0.87
TDP1-201ENST00000335725 N6AMT1Q9Y5N5 214 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 SMARCA4P51532 1647 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 NAT2P11245 290 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 GGCXP38435 758 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 ARPC4P59998 168 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 SGSM1Q2NKQ1 1148 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 EHBP1Q8NDI1 1231 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 ZNF473Q8WTR7 871 aaKnown RBP9.63□□□□□ -0.87
TDP1-201ENST00000335725 ZCWPW1Q9H0M4 648 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 SENP2Q9HC62 589 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 ZNF148Q9UQR1 794 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 CHMP3Q9Y3E7 222 aa9.63□□□□□ -0.87
TDP1-201ENST00000335725 RHOXF2BP0C7M4 288 aa9.62□□□□□ -0.87
TDP1-201ENST00000335725 ABL2P42684 1182 aa9.62□□□□□ -0.87
TDP1-201ENST00000335725 POLE2P56282 527 aa9.62□□□□□ -0.87
TDP1-201ENST00000335725 IL17RAQ96F46 866 aa9.62□□□□□ -0.87
TDP1-201ENST00000335725 RHOXF2Q9BQY4 288 aa9.62□□□□□ -0.87
TDP1-201ENST00000335725 PCMTD2Q9NV79 361 aa9.62□□□□□ -0.87
TDP1-201ENST00000335725 N4BP3O15049 544 aa9.62□□□□□ -0.87
TDP1-201ENST00000335725 CLTAP09496 248 aa9.62□□□□□ -0.87
TDP1-201ENST00000335725 MECOMQ03112 1051 aa9.62□□□□□ -0.87
TDP1-201ENST00000335725 GIGYF2Q6Y7W6 1299 aaKnown RBP9.62□□□□□ -0.87
TDP1-201ENST00000335725 SREK1Q8WXA9 508 aaKnown RBP9.62□□□□□ -0.87
TDP1-201ENST00000335725 RSPH1Q8WYR4 309 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms