RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 SEC62Q99442 399 aaKnown RBP19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 GPR108Q9NPR9 543 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 UGGT1Q9NYU2 1555 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 NR1I2O75469 434 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 PCCAP05165 728 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 CTSWP56202 376 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 KCNJ14Q9UNX9 436 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 EBAG9O00559 213 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 CHMP4BP1P59074 171 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 HAUS3Q68CZ6 603 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 ZNF654Q8IZM8 581 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 CARD6Q9BX69 1037 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 XPO4Q9C0E2 1151 aaKnown RBP19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 VPS18Q9P253 973 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 IKBKGQ9Y6K9 419 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 EFCAB6Q5THR3 1501 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 UNC5CLQ8IV45 518 aa19.17■□□□□ 0.66
TRAPPC11-201ENST00000334690 UFL1O94874 794 aa19.16■□□□□ 0.66
TRAPPC11-201ENST00000334690 CMA1P23946 247 aa19.16■□□□□ 0.66
TRAPPC11-201ENST00000334690 NBPF11Q86T75 865 aa19.16■□□□□ 0.66
TRAPPC11-201ENST00000334690 ZBTB38Q8NAP3 1195 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC11-201ENST00000334690 RBM17Q96I25 401 aaKnown RBP19.16■□□□□ 0.66
TRAPPC11-201ENST00000334690 NSRP1Q9H0G5 558 aaKnown RBP19.16■□□□□ 0.66
TRAPPC11-201ENST00000334690 MAPK8IP1Q9UQF2 711 aa19.16■□□□□ 0.66
TRAPPC11-201ENST00000334690 PFKFB1P16118 471 aa19.16■□□□□ 0.66
TRAPPC11-201ENST00000334690 AATFQ9NY61 560 aaKnown RBP eCLIP19.16■□□□□ 0.66
TRAPPC11-201ENST00000334690 PDE6AP16499 860 aa19.16■□□□□ 0.66
TRAPPC11-201ENST00000334690 NOSTRINQ8IVI9 506 aa19.16■□□□□ 0.66
TRAPPC11-201ENST00000334690 MRFAP1L1Q96HT8 127 aa19.16■□□□□ 0.66
TRAPPC11-201ENST00000334690 CETN3O15182 167 aa19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 CFAP58Q5T655 872 aa19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 TTLL7Q6ZT98 887 aa19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 SIRT2Q8IXJ6 389 aa19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 PLEKHG1Q9ULL1 1385 aa19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 USP6P35125 1406 aa19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 PREX2Q70Z35 1606 aa19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 FGAP02671 866 aa19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 SAP30BPQ9UHR5 308 aaKnown RBP19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 U2AF2P26368 475 aaKnown RBP eCLIP19.15■□□□□ 0.661e-7■■□□□ 12.8
TRAPPC11-201ENST00000334690 CCDC84Q86UT8 332 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 LRWD1Q9UFC0 647 aa19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 CDK12Q9NYV4 1490 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 RIMBP2O15034 1052 aa19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 RAPGEF1Q13905 1077 aa19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 FBXO18Q8NFZ0 1043 aa19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 DBNLQ9UJU6 430 aaKnown RBP19.15■□□□□ 0.66
TRAPPC11-201ENST00000334690 ATP2A1O14983 1001 aa19.14■□□□□ 0.66
TRAPPC11-201ENST00000334690 TXKP42681 527 aa19.14■□□□□ 0.66
TRAPPC11-201ENST00000334690 TCHPQ9BT92 498 aa19.14■□□□□ 0.66
TRAPPC11-201ENST00000334690 SH2D4AQ9H788 454 aa19.14■□□□□ 0.66
TRAPPC11-201ENST00000334690 GGA1Q9UJY5 639 aa19.14■□□□□ 0.66
TRAPPC11-201ENST00000334690 CCNT1O60563 726 aaKnown RBP19.14■□□□□ 0.65
TRAPPC11-201ENST00000334690 RBM6P78332 1123 aaKnown RBP19.14■□□□□ 0.65
TRAPPC11-201ENST00000334690 MAST3O60307 1309 aa19.14■□□□□ 0.65
TRAPPC11-201ENST00000334690 CD2BP2O95400 341 aaKnown RBP19.14■□□□□ 0.65
TRAPPC11-201ENST00000334690 ADD1P35611 737 aaKnown RBP19.14■□□□□ 0.65
TRAPPC11-201ENST00000334690 ARHGEF25Q86VW2 580 aa19.14■□□□□ 0.65
TRAPPC11-201ENST00000334690 SYNCQ9H7C4 482 aa19.14■□□□□ 0.65
TRAPPC11-201ENST00000334690 GPCPD1Q9NPB8 672 aa19.14■□□□□ 0.65
TRAPPC11-201ENST00000334690 HOMER2Q9NSB8 354 aa19.14■□□□□ 0.65
TRAPPC11-201ENST00000334690 TFCP2L1Q9NZI6 479 aa19.14■□□□□ 0.65
TRAPPC11-201ENST00000334690 CCNL1Q9UK58 526 aaPredicted RBP19.14■□□□□ 0.65
TRAPPC11-201ENST00000334690 EPB41P11171 864 aaKnown RBP19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 ARID4AP29374 1257 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 PPARAQ07869 468 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 ADCK5Q3MIX3 580 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 A0A1W2PRG0 241 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 DCAF17Q5H9S7 520 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 IFNL3Q8IZI9 196 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 IFT81Q8WYA0 676 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 VPS54Q9P1Q0 977 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 MTRF1LQ9UGC7 380 aaKnown RBP19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 PARP3Q9Y6F1 533 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 SMAP1Q8IYB5 467 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 CCDC51Q96ER9 411 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 ADCY9O60503 1353 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 B4DLN1 442 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 TRIML1Q8N9V2 468 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 FRMD4BQ9Y2L6 1034 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 ZMYM6O95789 1325 aa19.13■□□□□ 0.65
TRAPPC11-201ENST00000334690 A0A1W2PQ27 194 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 A0A1W2PQ64 194 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 A0A1W2PQD8 194 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 RPS8P62241 208 aaKnown RBP19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 MTX1Q13505 466 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 UBE3CQ15386 1083 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 ELF2Q15723 593 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 TFAP4Q01664 338 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 GRIPAP1Q4V328 841 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 FANCBQ8NB91 859 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 FAM76AQ8TAV0 307 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 VEZTQ9HBM0 779 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 SLAIN2Q9P270 581 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 ARPP21Q9UBL0 812 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 SERTAD1Q9UHV2 236 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 MTUS1Q9ULD2 1270 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 PTCH1Q13635 1447 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 PDIA3P30101 505 aaKnown RBP19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 TAB2Q9NYJ8 693 aa19.12■□□□□ 0.65
TRAPPC11-201ENST00000334690 JAKMIP2Q96AA8 810 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms