RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 RTN1Q16799 776 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 SULT6B1Q6IMI4 303 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 PANK2Q9BZ23 570 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 TFIP11Q9UBB9 837 aaKnown RBP6.13□□□□□ -1.43
PTPRB-202ENST00000334414 EXOC7Q9UPT5 735 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 INPP1P49441 399 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 SLC26A6Q9BXS9 759 aa6.13□□□□□ -1.43
PTPRB-202ENST00000334414 MRC2Q9UBG0 1479 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 FLIIQ13045 1269 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 JPH4Q96JJ6 628 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 SERPINI1Q99574 410 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 HELLSQ9NRZ9 838 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 KCNG1Q9UIX4 513 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 SPECC1L-ADORA2AF8WAN1 911 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 ALS2CLQ60I27 953 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 TTC19Q6DKK2 380 aaPredicted RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 SLC17A8Q8NDX2 589 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 PIP4K2CQ8TBX8 421 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 EFHD1Q9BUP0 239 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 MRPL40Q9NQ50 206 aaKnown RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 BAIAP2L1Q9UHR4 511 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 DCTN3O75935 186 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 DNM1Q05193 864 aaKnown RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 IFIT1BQ5T764 474 aaKnown RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 ARHGEF18Q6ZSZ5 1173 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 CCDC197Q8NCU1 140 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 SERPINA10Q9UK55 444 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 WWC3Q9ULE0 1092 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 TPX2Q9ULW0 747 aaKnown RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 THAP12O43422 761 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 TRIM6Q9C030 488 aaPredicted RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 BCL2L12Q9HB09 334 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 DDX21Q9NR30 783 aaKnown RBP eCLIP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 ZRANB1Q9UGI0 708 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 HYOU1Q9Y4L1 999 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 ZFXP17010 805 aaPredicted RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 YWHAEP62258 255 aaKnown RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 ASPHQ12797 758 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 PDXDC1Q6P996 788 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 NOC4LQ9BVI4 516 aaKnown RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 BZW2Q9Y6E2 419 aaKnown RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 RGS12O14924 1447 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 EEF2P13639 858 aaKnown RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 TCP1P17987 556 aaKnown RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 PDE1AP54750 535 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 SLC8A3P57103 927 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 IL9RQ01113 521 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 PDE1CQ14123 709 aaPredicted RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 TSC22D3Q99576 134 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 TRAPPC8Q9Y2L5 1435 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 ARL1P40616 181 aaPredicted RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 ARHGAP4P98171 946 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 ASIC2Q16515 512 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 ANKRD44Q8N8A2 993 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 PPIP5K1Q6PFW1 1433 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 CCDC93Q567U6 631 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 SV2BQ7L1I2 683 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 VTI1AQ96AJ9 217 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 ZKSCAN3Q9BRR0 538 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 CDK19Q9BWU1 502 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 ANKRD2Q9GZV1 360 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 AGTPBP1Q9UPW5 1226 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 JRKLQ9Y4A0 524 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 HNRNPCL1O60812 293 aaKnown RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 KRT79Q5XKE5 535 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 ZNF830Q96NB3 372 aaPredicted RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 IFIH1Q9BYX4 1025 aaKnown RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 IL1RAPL2Q9NP60 686 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 PACSIN2Q9UNF0 486 aaPredicted RBP6.12□□□□□ -1.43
PTPRB-202ENST00000334414 RAPGEF6Q8TEU7 1601 aa6.12□□□□□ -1.43
PTPRB-202ENST00000334414 SYNMO15061 1565 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 GNGT1P63211 74 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 CUL1Q13616 776 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 MICU3Q86XE3 530 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 HAUS4Q9H6D7 363 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 UGGT2Q9NYU1 1516 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 SART1O43290 800 aaKnown RBP6.11□□□□□ -1.43
PTPRB-202ENST00000334414 MAP3K7O43318 606 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 N4BP1O75113 896 aaKnown RBP6.11□□□□□ -1.43
PTPRB-202ENST00000334414 PLCG2P16885 1265 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 TRHP20396 242 aaPredicted RBP6.11□□□□□ -1.43
PTPRB-202ENST00000334414 YY1AP1Q9H869 796 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 NPC1L1Q9UHC9 1359 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 ALDH1L1O75891 902 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 DEXIO95424 95 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 WDR44Q5JSH3 913 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 RSPH3Q86UC2 560 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 CCDC89Q8N998 374 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 LZTS2Q9BRK4 669 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 NOP53Q9NZM5 478 aaKnown RBP6.11□□□□□ -1.43
PTPRB-202ENST00000334414 KDM2BQ8NHM5 1336 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 DNMT1P26358 1616 aaKnown RBP6.11□□□□□ -1.43
PTPRB-202ENST00000334414 RANBP6O60518 1105 aaKnown RBP6.11□□□□□ -1.43
PTPRB-202ENST00000334414 TTC4O95801 387 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 PHEXP78562 749 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 RASIP1Q5U651 963 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 TRIM68Q6AZZ1 485 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 ZNF449Q6P9G9 518 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 PLCD3Q8N3E9 789 aa6.11□□□□□ -1.43
PTPRB-202ENST00000334414 PASKQ96RG2 1323 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms