RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 HINFPQ9BQA5 517 aa20.7■□□□□ 0.9
SOCS3-201ENST00000330871 ZC3H4Q9UPT8 1303 aaKnown RBP20.7■□□□□ 0.9
SOCS3-201ENST00000330871 SPECC1Q5M775 1068 aa20.7■□□□□ 0.9
SOCS3-201ENST00000330871 WDR93Q6P2C0 686 aa20.7■□□□□ 0.9
SOCS3-201ENST00000330871 METTL22Q9BUU2 404 aaPredicted RBP20.7■□□□□ 0.9
SOCS3-201ENST00000330871 CD248Q9HCU0 757 aa20.7■□□□□ 0.9
SOCS3-201ENST00000330871 CCDC189A1A4V9 331 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 SHOX2O60902 331 aaPredicted RBP20.69■□□□□ 0.9
SOCS3-201ENST00000330871 MYD88Q99836 296 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 VIPAS39Q9H9C1 493 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 RFX5P48382 616 aaPredicted RBP20.69■□□□□ 0.9
SOCS3-201ENST00000330871 WHAMMP3Q1A5X7 153 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 CNPY4Q8N129 248 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 CCDC148Q8NFR7 591 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 E7EWF7 191 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 H0YHG0 523 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 ZNF18P17022 549 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 SLC39A14Q15043 492 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 GIMAP7Q8NHV1 300 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 AGXT2Q9BYV1 514 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 HPSEQ9Y251 543 aa20.69■□□□□ 0.9
SOCS3-201ENST00000330871 RGPD2P0DJD1 1756 aa20.68■□□□□ 0.9
SOCS3-201ENST00000330871 GOLGA6CA6NDK9 693 aa20.68■□□□□ 0.9
SOCS3-201ENST00000330871 GOLGA6DP0CG33 693 aa20.68■□□□□ 0.9
SOCS3-201ENST00000330871 MYL6BP14649 208 aa20.68■□□□□ 0.9
SOCS3-201ENST00000330871 SETQ01105 290 aaPredicted RBP20.68■□□□□ 0.9
SOCS3-201ENST00000330871 SATB1Q01826 763 aa20.68■□□□□ 0.9
SOCS3-201ENST00000330871 KBTBD3Q8NAB2 608 aa20.68■□□□□ 0.9
SOCS3-201ENST00000330871 DBNDD2Q9BQY9 259 aa20.68■□□□□ 0.9
SOCS3-201ENST00000330871 GOLGA6AQ9NYA3 693 aa20.68■□□□□ 0.9
SOCS3-201ENST00000330871 AGPSO00116 658 aa20.68■□□□□ 0.9
SOCS3-201ENST00000330871 COPS6Q7L5N1 327 aa20.68■□□□□ 0.9
SOCS3-201ENST00000330871 XAGE3Q8WTP9 111 aa20.68■□□□□ 0.9
SOCS3-201ENST00000330871 ZNF274Q96GC6 653 aaPredicted RBP20.68■□□□□ 0.9
SOCS3-201ENST00000330871 MYO6Q9UM54 1294 aa20.68■□□□□ 0.9
SOCS3-201ENST00000330871 LAMA4Q16363 1823 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 MYO1BO43795 1136 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 TUBB4BP68371 445 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 KIF23Q02241 960 aaPredicted RBP20.67■□□□□ 0.9
SOCS3-201ENST00000330871 NR1I3Q14994 352 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 PPP2R5AQ15172 486 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 BRAPQ7Z569 592 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 RPAINQ86UA6 219 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 PPFIBP1Q86W92 1011 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 PRPF38AQ8NAV1 312 aaKnown RBP20.67■□□□□ 0.9
SOCS3-201ENST00000330871 COG1Q8WTW3 980 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 PANX2Q96RD6 677 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 CRACR2AQ9BSW2 395 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 SH3TC1Q8TE82 1336 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 GNGT1P63211 74 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 RASGRP2Q7LDG7 609 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 POTEDQ86YR6 584 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 MED15Q96RN5 788 aa20.67■□□□□ 0.9
SOCS3-201ENST00000330871 SHTN1A0MZ66 631 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 ENC1O14682 589 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 MYBL2P10244 700 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 TUBB2AQ13885 445 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 CCDC102BQ68D86 513 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 CABS1Q96KC9 395 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 AIFM3Q96NN9 605 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 TUBB2BQ9BVA1 445 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 CAPS2Q9BXY5 557 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 GNL3LQ9NVN8 582 aaKnown RBP20.66■□□□□ 0.9
SOCS3-201ENST00000330871 HDAC6Q9UBN7 1215 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 HOOK1Q9UJC3 728 aaKnown RBP20.66■□□□□ 0.9
SOCS3-201ENST00000330871 ECM2O94769 699 aaPredicted RBP20.66■□□□□ 0.9
SOCS3-201ENST00000330871 GPTP24298 496 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 ATP2B2Q01814 1243 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 DSCC1Q9BVC3 393 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 MAN1B1Q9UKM7 699 aa20.66■□□□□ 0.9
SOCS3-201ENST00000330871 USP14P54578 494 aa20.65■□□□□ 0.9
SOCS3-201ENST00000330871 ZNF790Q6PG37 636 aa20.65■□□□□ 0.9
SOCS3-201ENST00000330871 HELLSQ9NRZ9 838 aa20.65■□□□□ 0.9
SOCS3-201ENST00000330871 TUBBP07437 444 aa20.65■□□□□ 0.9
SOCS3-201ENST00000330871 CASP14P31944 242 aa20.65■□□□□ 0.9
SOCS3-201ENST00000330871 RABL6Q3YEC7 729 aaPredicted RBP20.65■□□□□ 0.9
SOCS3-201ENST00000330871 ANKRD13DQ6ZTN6 518 aa20.65■□□□□ 0.9
SOCS3-201ENST00000330871 SRGAP2O75044 1071 aa20.64■□□□□ 0.9
SOCS3-201ENST00000330871 GRAMD1CQ8IYS0 662 aa20.64■□□□□ 0.9
SOCS3-201ENST00000330871 STK11IPQ8N1F8 1099 aa20.64■□□□□ 0.9
SOCS3-201ENST00000330871 ANKRD24Q8TF21 1146 aa20.64■□□□□ 0.9
SOCS3-201ENST00000330871 GRIN2DO15399 1336 aa20.64■□□□□ 0.9
SOCS3-201ENST00000330871 A1BGP04217 495 aa20.64■□□□□ 0.89
SOCS3-201ENST00000330871 SLC9C2Q5TAH2 1124 aa20.64■□□□□ 0.89
SOCS3-201ENST00000330871 CAPZA3Q96KX2 299 aa20.64■□□□□ 0.89
SOCS3-201ENST00000330871 TRIM10Q9UDY6 481 aa20.64■□□□□ 0.89
SOCS3-201ENST00000330871 KCNH3Q9ULD8 1083 aa20.64■□□□□ 0.89
SOCS3-201ENST00000330871 EIF3HO15372 352 aaKnown RBP eCLIP20.63■□□□□ 0.89
SOCS3-201ENST00000330871 GCP02774 474 aa20.63■□□□□ 0.89
SOCS3-201ENST00000330871 AMPD2Q01433 879 aa20.63■□□□□ 0.89
SOCS3-201ENST00000330871 MMS19Q96T76 1030 aa20.63■□□□□ 0.89
SOCS3-201ENST00000330871 SLC39A6Q13433 755 aa20.63■□□□□ 0.89
SOCS3-201ENST00000330871 MAP9Q49MG5 647 aa20.63■□□□□ 0.89
SOCS3-201ENST00000330871 ZKSCAN4Q969J2 545 aaPredicted RBP20.63■□□□□ 0.89
SOCS3-201ENST00000330871 SELENOOQ9BVL4 669 aa20.63■□□□□ 0.89
SOCS3-201ENST00000330871 NBPF3Q9H094 633 aa20.63■□□□□ 0.89
SOCS3-201ENST00000330871 CPLX1O14810 134 aa20.62■□□□□ 0.89
SOCS3-201ENST00000330871 PPFIA1Q13136 1202 aa20.62■□□□□ 0.89
SOCS3-201ENST00000330871 RESP18Q5W5W9 173 aa20.62■□□□□ 0.89
SOCS3-201ENST00000330871 NUTM2AQ8IVF1 878 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms