RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 PCDHB6Q9Y5E3 794 aa19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 BAZ2BQ9UIF8 2168 aaKnown RBP19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 WDR19Q8NEZ3 1342 aa19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 PAPPAQ13219 1627 aa19.96■□□□□ 0.79
PTP4A3-201ENST00000329397 SHANK3Q9BYB0 1731 aa19.95■□□□□ 0.79
PTP4A3-201ENST00000329397 FAM205CA6NFA0 338 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 KIF2AO00139 706 aaPredicted RBP19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 NRDCO43847 1150 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 TRIM65Q6PJ69 517 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 NOSTRINQ8IVI9 506 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 VSTM4Q8IW00 320 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 SERTAD1Q9UHV2 236 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 STARD3NLO95772 234 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 SLFN14P0C7P3 912 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 CASP1P29466 404 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 CLCN6P51797 869 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 TTF1Q15361 905 aaPredicted RBP19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 LCORLQ8N3X6 602 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 KRI1Q8N9T8 703 aaKnown RBP19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 ZBTB9Q96C00 473 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 TMEM87BQ96K49 555 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 CARD10Q9BWT7 1032 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 MAN1B1Q9UKM7 699 aa19.95■□□□□ 0.78
PTP4A3-201ENST00000329397 CUTAO60888 179 aa19.94■□□□□ 0.78
PTP4A3-201ENST00000329397 SPATA5Q8NB90 893 aa19.94■□□□□ 0.78
PTP4A3-201ENST00000329397 DESI2Q9BSY9 194 aa19.94■□□□□ 0.78
PTP4A3-201ENST00000329397 NFE2L3Q9Y4A8 694 aa19.94■□□□□ 0.78
PTP4A3-201ENST00000329397 TDO2P48775 406 aa19.94■□□□□ 0.78
PTP4A3-201ENST00000329397 REXO1L1PQ8IX06 675 aa19.94■□□□□ 0.78
PTP4A3-201ENST00000329397 CARD6Q9BX69 1037 aa19.94■□□□□ 0.78
PTP4A3-201ENST00000329397 SAMSN1Q9NSI8 373 aaKnown RBP19.93■□□□□ 0.78
PTP4A3-201ENST00000329397 GSG1L2A8MUP6 293 aa19.93■□□□□ 0.78
PTP4A3-201ENST00000329397 CDK11BP21127 795 aaKnown RBP19.93■□□□□ 0.78
PTP4A3-201ENST00000329397 TOGARAM2Q6ZUX3 1019 aa19.93■□□□□ 0.78
PTP4A3-201ENST00000329397 SGMS1Q86VZ5 419 aa19.93■□□□□ 0.78
PTP4A3-201ENST00000329397 TMEM139Q8IV31 216 aa19.93■□□□□ 0.78
PTP4A3-201ENST00000329397 MED15Q96RN5 788 aa19.93■□□□□ 0.78
PTP4A3-201ENST00000329397 ABCC12Q96J65 1359 aa19.93■□□□□ 0.78
PTP4A3-201ENST00000329397 POSTNQ15063 836 aa19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 WDR24Q96S15 920 aa19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 ERICH4A6NGS2 130 aa19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 PATL2C9JE40 543 aaKnown RBP19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 COBLO75128 1261 aa19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 ATRNO75882 1429 aa19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 SEC31AO94979 1220 aaKnown RBP19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 MMP1P03956 469 aa19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 ARID4AP29374 1257 aaPredicted RBP19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 BCAMP50895 628 aa19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 CHD4Q14839 1912 aa19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 MFSD6Q6ZSS7 791 aa19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.92■□□□□ 0.78
PTP4A3-201ENST00000329397 VWA3AA6NCI4 1184 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 CBFA2T2O43439 604 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 KIF20AO95235 890 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 FMNL1O95466 1100 aaPredicted RBP19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 H2AFXP16104 143 aaPredicted RBP19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 MDM2Q00987 491 aaPredicted RBP19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 RTN1Q16799 776 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 AKNAD1Q5T1N1 836 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 KLHL10Q6JEL2 608 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 SDR42E1Q8WUS8 393 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 FBXO2Q9UK22 296 aaPredicted RBP19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 SLC4A4Q9Y6R1 1079 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 CDHR2Q9BYE9 1310 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 MYH3P11055 1940 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 MTF1Q14872 753 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 PUM3Q15397 648 aaKnown RBP19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 CABP5Q9NP86 173 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 PPP2R2CQ9Y2T4 447 aa19.91■□□□□ 0.78
PTP4A3-201ENST00000329397 WTIPA6NIX2 430 aaPredicted RBP19.9■□□□□ 0.78
PTP4A3-201ENST00000329397 STX17P56962 302 aa19.9■□□□□ 0.78
PTP4A3-201ENST00000329397 KARSQ15046 597 aaKnown RBP19.9■□□□□ 0.78
PTP4A3-201ENST00000329397 TERF2Q15554 542 aa19.9■□□□□ 0.78
PTP4A3-201ENST00000329397 MNS1Q8NEH6 495 aa19.9■□□□□ 0.78
PTP4A3-201ENST00000329397 IRX2Q9BZI1 471 aaPredicted RBP19.9■□□□□ 0.78
PTP4A3-201ENST00000329397 MINDY4BA8MYZ0 360 aa19.9■□□□□ 0.78
PTP4A3-201ENST00000329397 PRDM1O75626 825 aa19.9■□□□□ 0.78
PTP4A3-201ENST00000329397 UBXN4Q92575 508 aa19.9■□□□□ 0.78
PTP4A3-201ENST00000329397 SHISA4Q96DD7 197 aa19.9■□□□□ 0.78
PTP4A3-201ENST00000329397 PARP3Q9Y6F1 533 aa19.9■□□□□ 0.78
PTP4A3-201ENST00000329397 A0A0U1RQJ8 604 aa19.89■□□□□ 0.78
PTP4A3-201ENST00000329397 FAM237AA0A1B0GTK4 181 aa19.89■□□□□ 0.78
PTP4A3-201ENST00000329397 PDE8AO60658 829 aa19.89■□□□□ 0.78
PTP4A3-201ENST00000329397 AFMP43652 599 aa19.89■□□□□ 0.78
PTP4A3-201ENST00000329397 WTAPQ15007 396 aa19.89■□□□□ 0.78
PTP4A3-201ENST00000329397 SAFBQ15424 915 aaKnown RBP eCLIP19.89■□□□□ 0.78
PTP4A3-201ENST00000329397 SMYD4Q8IYR2 804 aaPredicted RBP19.89■□□□□ 0.78
PTP4A3-201ENST00000329397 ATRIPQ8WXE1 791 aa19.89■□□□□ 0.78
PTP4A3-201ENST00000329397 LPIN2Q92539 896 aa19.89■□□□□ 0.78
PTP4A3-201ENST00000329397 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.89■□□□□ 0.77
PTP4A3-201ENST00000329397 CYP19A1P11511 503 aaPredicted RBP19.89■□□□□ 0.77
PTP4A3-201ENST00000329397 IFNAR1P17181 557 aa19.89■□□□□ 0.77
PTP4A3-201ENST00000329397 LIFRP42702 1097 aa19.89■□□□□ 0.77
PTP4A3-201ENST00000329397 GNG11P61952 73 aa19.89■□□□□ 0.77
PTP4A3-201ENST00000329397 GABPB1Q06547 395 aaPredicted RBP19.89■□□□□ 0.77
PTP4A3-201ENST00000329397 MAP3K12Q12852 859 aa19.89■□□□□ 0.77
PTP4A3-201ENST00000329397 DZIP3Q86Y13 1208 aaKnown RBP19.89■□□□□ 0.77
PTP4A3-201ENST00000329397 BAG1Q99933 345 aaPredicted RBP19.89■□□□□ 0.77
PTP4A3-201ENST00000329397 CSRNP2Q9H175 543 aa19.89■□□□□ 0.77
PTP4A3-201ENST00000329397 FHOD1Q9Y613 1164 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms