RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 MMP1P03956 469 aa13.9□□□□□ -0.18
NCL-201ENST00000322723 FSIP1Q8NA03 581 aa13.9□□□□□ -0.18
NCL-201ENST00000322723 NACAP1Q9BZK3 213 aa13.9□□□□□ -0.18
NCL-201ENST00000322723 GYG1P46976 350 aa13.9□□□□□ -0.18
NCL-201ENST00000322723 GUCY1B3Q02153 619 aa13.9□□□□□ -0.18
NCL-201ENST00000322723 CRACR2BQ8N4Y2 399 aaPredicted RBP13.9□□□□□ -0.18
NCL-201ENST00000322723 ANKRD2Q9GZV1 360 aa13.9□□□□□ -0.18
NCL-201ENST00000322723 FOXP1Q9H334 677 aaPredicted RBP13.9□□□□□ -0.18
NCL-201ENST00000322723 TOB1P50616 345 aaPredicted RBP13.89□□□□□ -0.19
NCL-201ENST00000322723 RBM6P78332 1123 aaKnown RBP13.89□□□□□ -0.19
NCL-201ENST00000322723 SPC24Q8NBT2 197 aa13.89□□□□□ -0.19
NCL-201ENST00000322723 MAGEB6P1A0A0J9YX57 407 aa13.89□□□□□ -0.19
NCL-201ENST00000322723 GOLGA6L4A6NEF3 574 aa13.89□□□□□ -0.19
NCL-201ENST00000322723 GNL3LQ9NVN8 582 aaKnown RBP13.89□□□□□ -0.19
NCL-201ENST00000322723 GOLGA8AA7E2F4 631 aa13.89□□□□□ -0.19
NCL-201ENST00000322723 KLRK1P26718 216 aa13.89□□□□□ -0.19
NCL-201ENST00000322723 TNFRSF25Q93038 417 aa13.89□□□□□ -0.19
NCL-201ENST00000322723 TNS1Q9HBL0 1735 aaKnown RBP13.88□□□□□ -0.19
NCL-201ENST00000322723 PKN1Q16512 942 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 CRY2Q49AN0 593 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 SHC4Q6S5L8 630 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 ANKS1AQ92625 1134 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 DNAJC25Q9H1X3 360 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 NUTM2BA6NNL0 878 aaPredicted RBP13.88□□□□□ -0.19
NCL-201ENST00000322723 NUTM2EB1AL46 878 aaPredicted RBP13.88□□□□□ -0.19
NCL-201ENST00000322723 CYP7A1P22680 504 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 ZNF165P49910 485 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 MDM2Q00987 491 aaPredicted RBP13.88□□□□□ -0.19
NCL-201ENST00000322723 CTR9Q6PD62 1173 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 NUTM2AQ8IVF1 878 aaPredicted RBP13.88□□□□□ -0.19
NCL-201ENST00000322723 RNF26Q9BY78 433 aaPredicted RBP13.88□□□□□ -0.19
NCL-201ENST00000322723 HSD3B7Q9H2F3 369 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 KIAA1468Q9P260 1216 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 SIPA1L1O43166 1804 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 GTF2F1P35269 517 aaKnown RBP eCLIP13.88□□□□□ -0.19
NCL-201ENST00000322723 RPS8P62241 208 aaKnown RBP13.88□□□□□ -0.19
NCL-201ENST00000322723 CCDC73Q6ZRK6 1079 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 WASF1Q92558 559 aa13.88□□□□□ -0.19
NCL-201ENST00000322723 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.87□□□□□ -0.19
NCL-201ENST00000322723 ADRA2BP18089 450 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 NPY5RQ15761 445 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
NCL-201ENST00000322723 SRP68Q9UHB9 627 aaKnown RBP13.87□□□□□ -0.19
NCL-201ENST00000322723 GUCY1A2P33402 732 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 IARSP41252 1262 aaKnown RBP13.87□□□□□ -0.19
NCL-201ENST00000322723 NCAPHQ15003 741 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 NT5DC1Q5TFE4 455 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
NCL-201ENST00000322723 PHKBQ93100 1093 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 SLC12A7Q9Y666 1083 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 CPLX1O14810 134 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 IFIT3O14879 490 aaKnown RBP13.87□□□□□ -0.19
NCL-201ENST00000322723 PFKFB1P16118 471 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 ZNF654Q8IZM8 581 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 STK11IPQ8N1F8 1099 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 ENAHQ8N8S7 591 aaPredicted RBP13.87□□□□□ -0.19
NCL-201ENST00000322723 ANO10Q9NW15 660 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 KLRG2A4D1S0 409 aaPredicted RBP13.87□□□□□ -0.19
NCL-201ENST00000322723 UBE2Q2LH0YL09 131 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 DEXIO95424 95 aa13.87□□□□□ -0.19
NCL-201ENST00000322723 CCDC94Q9BW85 323 aaPredicted RBP13.87□□□□□ -0.19
NCL-201ENST00000322723 MYH8P13535 1937 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 PSME4Q14997 1843 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 CUTAO60888 179 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 ME1P48163 572 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 SSRP1Q08945 709 aaKnown RBP13.86□□□□□ -0.19
NCL-201ENST00000322723 TROAPQ12815 778 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 WTAPQ15007 396 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 NOSTRINQ8IVI9 506 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 FANCBQ8NB91 859 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 DDAH1O94760 285 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 MECOMQ03112 1051 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 SF3A1Q15459 793 aaKnown RBP13.86□□□□□ -0.19
NCL-201ENST00000322723 CAVIN4Q5BKX8 364 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 PHF20Q9BVI0 1012 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 LRP2BPQ9P2M1 347 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 FBXO2Q9UK22 296 aaPredicted RBP13.86□□□□□ -0.19
NCL-201ENST00000322723 SMIM22K7EJ46 135 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 PRPF3O43395 683 aaKnown RBP13.86□□□□□ -0.19
NCL-201ENST00000322723 KINO60870 393 aaKnown RBP13.86□□□□□ -0.19
NCL-201ENST00000322723 APPP05067 770 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 ATP8A2Q9NTI2 1148 aa13.86□□□□□ -0.19
NCL-201ENST00000322723 ZNF202O95125 648 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 RTN1Q16799 776 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 CPLX2Q6PUV4 134 aaKnown RBP13.85□□□□□ -0.19
NCL-201ENST00000322723 MICU3Q86XE3 530 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 RAB11FIP4Q86YS3 637 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 ZSCAN10Q96SZ4 725 aaPredicted RBP13.85□□□□□ -0.19
NCL-201ENST00000322723 A0A1B0GVL5 298 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 TDO2P48775 406 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 FOSBP53539 338 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 NLRP12P59046 1061 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 CEBPZQ03701 1054 aaKnown RBP13.85□□□□□ -0.19
NCL-201ENST00000322723 NOLC1Q14978 699 aaKnown RBP eCLIP13.85□□□□□ -0.195e-7■■■■■ 37.9
NCL-201ENST00000322723 MIGA1Q8NAN2 632 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 TTC12Q9H892 705 aaPredicted RBP13.85□□□□□ -0.19
NCL-201ENST00000322723 PYCARDQ9ULZ3 195 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 TNKSO95271 1327 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 CCDC69A6NI79 296 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 POLR3DP05423 398 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms