RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 KCNQ2O43526 872 aa25.77■■□□□ 1.72
PNKP-201ENST00000322344 RILPL1Q5EBL4 403 aa25.77■■□□□ 1.72
PNKP-201ENST00000322344 DIS3L2Q8IYB7 885 aaKnown RBP25.77■■□□□ 1.72
PNKP-201ENST00000322344 MINPP1Q9UNW1 487 aa25.77■■□□□ 1.72
PNKP-201ENST00000322344 IQSEC3Q9UPP2 1182 aaPredicted RBP25.77■■□□□ 1.72
PNKP-201ENST00000322344 COL4A1P02462 1669 aa25.77■■□□□ 1.72
PNKP-201ENST00000322344 COL1A1P02452 1464 aaPredicted RBP25.76■■□□□ 1.71
PNKP-201ENST00000322344 NUTM2BA6NNL0 878 aaPredicted RBP25.76■■□□□ 1.71
PNKP-201ENST00000322344 MINDY4BA8MYZ0 360 aa25.76■■□□□ 1.71
PNKP-201ENST00000322344 NUTM2EB1AL46 878 aaPredicted RBP25.76■■□□□ 1.71
PNKP-201ENST00000322344 SEC23AQ15436 765 aa25.76■■□□□ 1.71
PNKP-201ENST00000322344 NUTM2AQ8IVF1 878 aaPredicted RBP25.76■■□□□ 1.71
PNKP-201ENST00000322344 SDR42E1Q8WUS8 393 aa25.76■■□□□ 1.71
PNKP-201ENST00000322344 OSBPL5Q9H0X9 879 aaPredicted RBP25.76■■□□□ 1.71
PNKP-201ENST00000322344 BTBD18B2RXH4 712 aa25.75■■□□□ 1.71
PNKP-201ENST00000322344 BIN1O00499 593 aa25.75■■□□□ 1.71
PNKP-201ENST00000322344 GUCY1A2P33402 732 aa25.75■■□□□ 1.71
PNKP-201ENST00000322344 C3orf67Q6ZVT6 689 aa25.75■■□□□ 1.71
PNKP-201ENST00000322344 NYXQ9GZU5 481 aa25.75■■□□□ 1.71
PNKP-201ENST00000322344 PDS5AQ29RF7 1337 aaKnown RBP25.75■■□□□ 1.71
PNKP-201ENST00000322344 RNF26Q9BY78 433 aaPredicted RBP25.75■■□□□ 1.71
PNKP-201ENST00000322344 HOOK1Q9UJC3 728 aaKnown RBP25.75■■□□□ 1.71
PNKP-201ENST00000322344 TNKSO95271 1327 aa25.74■■□□□ 1.71
PNKP-201ENST00000322344 SCN7AQ01118 1682 aa25.74■■□□□ 1.71
PNKP-201ENST00000322344 UBE2Q2LH0YL09 131 aa25.74■■□□□ 1.71
PNKP-201ENST00000322344 GTF2E1P29083 439 aaPredicted RBP25.74■■□□□ 1.71
PNKP-201ENST00000322344 FILIP1Q7Z7B0 1213 aa25.74■■□□□ 1.71
PNKP-201ENST00000322344 FAM84BQ96KN1 310 aaPredicted RBP25.74■■□□□ 1.71
PNKP-201ENST00000322344 TAOK2Q9UL54 1235 aa25.74■■□□□ 1.71
PNKP-201ENST00000322344 KCNH3Q9ULD8 1083 aa25.74■■□□□ 1.71
PNKP-201ENST00000322344 LTBP4Q8N2S1 1624 aa25.74■■□□□ 1.71
PNKP-201ENST00000322344 NCAPHQ15003 741 aa25.73■■□□□ 1.71
PNKP-201ENST00000322344 KRBA2Q6ZNG9 492 aa25.73■■□□□ 1.71
PNKP-201ENST00000322344 NUP133Q8WUM0 1156 aa25.73■■□□□ 1.71
PNKP-201ENST00000322344 CLIC6Q96NY7 704 aa25.73■■□□□ 1.71
PNKP-201ENST00000322344 NOL10Q9BSC4 688 aaKnown RBP25.73■■□□□ 1.71
PNKP-201ENST00000322344 CEP131Q9UPN4 1083 aa25.73■■□□□ 1.71
PNKP-201ENST00000322344 CACNA1SQ13698 1873 aa25.73■■□□□ 1.71
PNKP-201ENST00000322344 SKILP12757 684 aa25.73■■□□□ 1.71
PNKP-201ENST00000322344 TPD52L1Q16890 204 aaPredicted RBP25.73■■□□□ 1.71
PNKP-201ENST00000322344 FBXO33Q7Z6M2 555 aa25.73■■□□□ 1.71
PNKP-201ENST00000322344 RIOK3O14730 519 aaKnown RBP25.72■■□□□ 1.71
PNKP-201ENST00000322344 MYO1BO43795 1136 aa25.72■■□□□ 1.71
PNKP-201ENST00000322344 XBP1P17861 261 aa25.72■■□□□ 1.71
PNKP-201ENST00000322344 GLIPR1L2Q4G1C9 344 aa25.72■■□□□ 1.71
PNKP-201ENST00000322344 TMED8Q6PL24 325 aaPredicted RBP25.72■■□□□ 1.71
PNKP-201ENST00000322344 ZSCAN10Q96SZ4 725 aaPredicted RBP25.72■■□□□ 1.71
PNKP-201ENST00000322344 KCND1Q9NSA2 647 aa25.72■■□□□ 1.71
PNKP-201ENST00000322344 KCNJ14Q9UNX9 436 aa25.72■■□□□ 1.71
PNKP-201ENST00000322344 DUOX1Q9NRD9 1551 aa25.71■■□□□ 1.71
PNKP-201ENST00000322344 FGRP09769 529 aa25.71■■□□□ 1.71
PNKP-201ENST00000322344 TNNT1P13805 278 aa25.71■■□□□ 1.71
PNKP-201ENST00000322344 PTPREP23469 700 aa25.71■■□□□ 1.71
PNKP-201ENST00000322344 TOB1P50616 345 aaPredicted RBP25.71■■□□□ 1.71
PNKP-201ENST00000322344 AKAP17AQ02040 695 aaKnown RBP25.71■■□□□ 1.71
PNKP-201ENST00000322344 RC3H1Q5TC82 1133 aaKnown RBP25.71■■□□□ 1.71
PNKP-201ENST00000322344 STK11IPQ8N1F8 1099 aa25.71■■□□□ 1.71
PNKP-201ENST00000322344 ZNF579Q8NAF0 562 aaKnown RBP25.71■■□□□ 1.71
PNKP-201ENST00000322344 CCDC150Q8NCX0 1101 aa25.71■■□□□ 1.71
PNKP-201ENST00000322344 CNNM3Q8NE01 707 aa25.71■■□□□ 1.71
PNKP-201ENST00000322344 PAXBP1Q9Y5B6 917 aa25.71■■□□□ 1.71
PNKP-201ENST00000322344 MORC2Q9Y6X9 1032 aaPredicted RBP25.71■■□□□ 1.71
PNKP-201ENST00000322344 SMC2O95347 1197 aa25.71■■□□□ 1.71
PNKP-201ENST00000322344 CCZ1BP86790 482 aa25.71■■□□□ 1.71
PNKP-201ENST00000322344 CCZ1P86791 482 aaPredicted RBP25.71■■□□□ 1.71
PNKP-201ENST00000322344 CELF1Q92879 486 aaKnown RBP25.71■■□□□ 1.71
PNKP-201ENST00000322344 C16orf45Q96MC5 204 aaPredicted RBP25.71■■□□□ 1.71
PNKP-201ENST00000322344 XPO4Q9C0E2 1151 aaKnown RBP25.71■■□□□ 1.71
PNKP-201ENST00000322344 RBM28Q9NW13 759 aaKnown RBP25.71■■□□□ 1.71
PNKP-201ENST00000322344 IFNKQ9P0W0 207 aa25.71■■□□□ 1.71
PNKP-201ENST00000322344 CALM1P0DP23 149 aa25.7■■□□□ 1.7
PNKP-201ENST00000322344 CALM2P0DP24 149 aa25.7■■□□□ 1.7
PNKP-201ENST00000322344 CALM3P0DP25 149 aa25.7■■□□□ 1.7
PNKP-201ENST00000322344 ARID5BQ14865 1188 aa25.7■■□□□ 1.7
PNKP-201ENST00000322344 OLFM4Q6UX06 510 aa25.7■■□□□ 1.7
PNKP-201ENST00000322344 ANKRD2Q9GZV1 360 aa25.7■■□□□ 1.7
PNKP-201ENST00000322344 NARFQ9UHQ1 456 aa25.7■■□□□ 1.7
PNKP-201ENST00000322344 FBXO2Q9UK22 296 aaPredicted RBP25.7■■□□□ 1.7
PNKP-201ENST00000322344 LONRF3Q496Y0 759 aa25.7■■□□□ 1.7
PNKP-201ENST00000322344 TBC1D9BQ66K14 1250 aa25.7■■□□□ 1.7
PNKP-201ENST00000322344 CATIPQ7Z7H3 387 aa25.7■■□□□ 1.7
PNKP-201ENST00000322344 METTL16Q86W50 562 aaKnown RBP25.7■■□□□ 1.7
PNKP-201ENST00000322344 IQCA1Q86XH1 822 aa25.7■■□□□ 1.7
PNKP-201ENST00000322344 RPS8P62241 208 aaKnown RBP25.69■■□□□ 1.7
PNKP-201ENST00000322344 DYNLL1P63167 89 aaKnown RBP25.69■■□□□ 1.7
PNKP-201ENST00000322344 MYL5Q02045 173 aa25.69■■□□□ 1.7
PNKP-201ENST00000322344 PNOCQ13519 176 aa25.69■■□□□ 1.7
PNKP-201ENST00000322344 ENAHQ8N8S7 591 aaPredicted RBP25.69■■□□□ 1.7
PNKP-201ENST00000322344 NLRP3Q96P20 1036 aa25.69■■□□□ 1.7
PNKP-201ENST00000322344 ZBTB22O15209 634 aa25.68■■□□□ 1.7
PNKP-201ENST00000322344 BCL2L12Q9HB09 334 aa25.68■■□□□ 1.7
PNKP-201ENST00000322344 PRPF3O43395 683 aaKnown RBP25.68■■□□□ 1.7
PNKP-201ENST00000322344 IFIT1BQ5T764 474 aaKnown RBP25.68■■□□□ 1.7
PNKP-201ENST00000322344 BICDL1Q6ZP65 573 aa25.68■■□□□ 1.7
PNKP-201ENST00000322344 CCDC82Q8N4S0 544 aa25.68■■□□□ 1.7
PNKP-201ENST00000322344 CASZ1Q86V15 1759 aa25.68■■□□□ 1.7
PNKP-201ENST00000322344 CTIFO43310 598 aaKnown RBP25.67■■□□□ 1.7
PNKP-201ENST00000322344 CBFA2T2O43439 604 aa25.67■■□□□ 1.7
PNKP-201ENST00000322344 RPS6KA4O75676 772 aa25.67■■□□□ 1.7
PNKP-201ENST00000322344 FANCCQ00597 558 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms