RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 LAMB1P07942 1786 aa23.94■■□□□ 1.42
HIGD1A-201ENST00000321331 CTNND1O60716 968 aaKnown RBP23.93■■□□□ 1.42
HIGD1A-201ENST00000321331 ALDH1A1P00352 501 aa23.93■■□□□ 1.42
HIGD1A-201ENST00000321331 ZFYP08048 801 aaPredicted RBP23.93■■□□□ 1.42
HIGD1A-201ENST00000321331 GTF2A2P52657 109 aa23.93■■□□□ 1.42
HIGD1A-201ENST00000321331 PDE1AP54750 535 aa23.93■■□□□ 1.42
HIGD1A-201ENST00000321331 NUCB1Q02818 461 aa23.93■■□□□ 1.42
HIGD1A-201ENST00000321331 PPIL2Q13356 520 aa23.93■■□□□ 1.42
HIGD1A-201ENST00000321331 SCYL3Q8IZE3 742 aa23.93■■□□□ 1.42
HIGD1A-201ENST00000321331 LCORLQ8N3X6 602 aa23.93■■□□□ 1.42
HIGD1A-201ENST00000321331 CRACR2BQ8N4Y2 399 aaPredicted RBP23.93■■□□□ 1.42
HIGD1A-201ENST00000321331 ARMT1Q9H993 441 aa23.93■■□□□ 1.42
HIGD1A-201ENST00000321331 FAM196BA6NMK8 535 aa23.92■■□□□ 1.42
HIGD1A-201ENST00000321331 MBD4O95243 580 aa23.92■■□□□ 1.42
HIGD1A-201ENST00000321331 SLURP2P0DP57 97 aa23.92■■□□□ 1.42
HIGD1A-201ENST00000321331 SLFNL1Q499Z3 407 aa23.92■■□□□ 1.42
HIGD1A-201ENST00000321331 OTUD7BQ6GQQ9 843 aa23.92■■□□□ 1.42
HIGD1A-201ENST00000321331 MYH1P12882 1939 aa23.92■■□□□ 1.42
HIGD1A-201ENST00000321331 TESPA1A2RU30 521 aaPredicted RBP23.91■■□□□ 1.42
HIGD1A-201ENST00000321331 TTC6Q86TZ1 520 aa23.91■■□□□ 1.42
HIGD1A-201ENST00000321331 IFNL1Q8IU54 200 aa23.91■■□□□ 1.42
HIGD1A-201ENST00000321331 IRF6O14896 467 aa23.91■■□□□ 1.42
HIGD1A-201ENST00000321331 RNF113AO15541 343 aaKnown RBP23.91■■□□□ 1.42
HIGD1A-201ENST00000321331 CHGBP05060 677 aa23.91■■□□□ 1.42
HIGD1A-201ENST00000321331 SNAPC2Q13487 334 aa23.91■■□□□ 1.42
HIGD1A-201ENST00000321331 MS4A4AQ96JQ5 239 aa23.91■■□□□ 1.42
HIGD1A-201ENST00000321331 FSD1Q9BTV5 496 aa23.91■■□□□ 1.42
HIGD1A-201ENST00000321331 CCL15-CCL14A0A0B4J2E2 113 aa23.9■■□□□ 1.42
HIGD1A-201ENST00000321331 CCL15Q16663 113 aa23.9■■□□□ 1.42
HIGD1A-201ENST00000321331 METTL16Q86W50 562 aaKnown RBP23.9■■□□□ 1.42
HIGD1A-201ENST00000321331 SDR42E1Q8WUS8 393 aa23.9■■□□□ 1.42
HIGD1A-201ENST00000321331 APPBP2Q92624 585 aa23.9■■□□□ 1.42
HIGD1A-201ENST00000321331 PUS7LQ9H0K6 701 aaKnown RBP23.9■■□□□ 1.42
HIGD1A-201ENST00000321331 POLR3DP05423 398 aaPredicted RBP23.89■■□□□ 1.41
HIGD1A-201ENST00000321331 CETPP11597 493 aa23.89■■□□□ 1.41
HIGD1A-201ENST00000321331 SLC4A8Q2Y0W8 1093 aa23.89■■□□□ 1.41
HIGD1A-201ENST00000321331 COL13A1Q5TAT6 717 aaPredicted RBP23.89■■□□□ 1.41
HIGD1A-201ENST00000321331 DDRGK1Q96HY6 314 aa23.89■■□□□ 1.41
HIGD1A-201ENST00000321331 ATP8A2Q9NTI2 1148 aa23.89■■□□□ 1.41
HIGD1A-201ENST00000321331 MCM9Q9NXL9 1143 aa23.89■■□□□ 1.41
HIGD1A-201ENST00000321331 SIPA1L1O43166 1804 aa23.89■■□□□ 1.41
HIGD1A-201ENST00000321331 DOCK1Q14185 1865 aa23.89■■□□□ 1.41
HIGD1A-201ENST00000321331 NAV1Q8NEY1 1877 aa23.89■■□□□ 1.41
HIGD1A-201ENST00000321331 IGF2BP3O00425 579 aaKnown RBP eCLIP23.88■■□□□ 1.41
HIGD1A-201ENST00000321331 PTPRAP18433 802 aa23.88■■□□□ 1.41
HIGD1A-201ENST00000321331 EHD4Q9H223 541 aa23.88■■□□□ 1.41
HIGD1A-201ENST00000321331 DCP1AQ9NPI6 582 aaPredicted RBP23.88■■□□□ 1.41
HIGD1A-201ENST00000321331 SERPINB13Q9UIV8 391 aa23.88■■□□□ 1.41
HIGD1A-201ENST00000321331 ZHX2Q9Y6X8 837 aa23.88■■□□□ 1.41
HIGD1A-201ENST00000321331 CAP2P40123 477 aa23.87■■□□□ 1.41
HIGD1A-201ENST00000321331 BRI3BPQ8WY22 251 aa23.87■■□□□ 1.41
HIGD1A-201ENST00000321331 EVI5LQ96CN4 794 aa23.87■■□□□ 1.41
HIGD1A-201ENST00000321331 CFHR5Q9BXR6 569 aa23.87■■□□□ 1.41
HIGD1A-201ENST00000321331 KCNH4Q9UQ05 1017 aa23.87■■□□□ 1.41
HIGD1A-201ENST00000321331 SLC4A4Q9Y6R1 1079 aa23.87■■□□□ 1.41
HIGD1A-201ENST00000321331 CXCL11O14625 94 aa23.86■■□□□ 1.41
HIGD1A-201ENST00000321331 PRKAB2O43741 272 aa23.86■■□□□ 1.41
HIGD1A-201ENST00000321331 TBC1D8O95759 1140 aa23.86■■□□□ 1.41
HIGD1A-201ENST00000321331 PTPN18Q99952 460 aa23.86■■□□□ 1.41
HIGD1A-201ENST00000321331 DNAJC18Q9H819 358 aa23.86■■□□□ 1.41
HIGD1A-201ENST00000321331 DDX60LQ5H9U9 1706 aaKnown RBP23.85■■□□□ 1.41
HIGD1A-201ENST00000321331 PLEKHM2Q8IWE5 1019 aa23.85■■□□□ 1.41
HIGD1A-201ENST00000321331 AMOTL1Q8IY63 956 aa23.85■■□□□ 1.41
HIGD1A-201ENST00000321331 OSBP2Q969R2 916 aa23.85■■□□□ 1.41
HIGD1A-201ENST00000321331 OSBPL3Q9H4L5 887 aa23.85■■□□□ 1.41
HIGD1A-201ENST00000321331 PLCD1P51178 756 aa23.84■■□□□ 1.41
HIGD1A-201ENST00000321331 STRBPQ96SI9 672 aaKnown RBP23.84■■□□□ 1.41
HIGD1A-201ENST00000321331 TBC1D2Q9BYX2 928 aa23.84■■□□□ 1.41
HIGD1A-201ENST00000321331 GINM1Q9NU53 330 aa23.84■■□□□ 1.41
HIGD1A-201ENST00000321331 ASNSP08243 561 aa23.83■■□□□ 1.41
HIGD1A-201ENST00000321331 RRP1BQ14684 758 aaKnown RBP23.83■■□□□ 1.41
HIGD1A-201ENST00000321331 AFG3L2Q9Y4W6 797 aa23.83■■□□□ 1.41
HIGD1A-201ENST00000321331 ATAD5Q96QE3 1844 aa23.83■■□□□ 1.4
HIGD1A-201ENST00000321331 TRIM6-TRIM34B2RNG4 842 aa23.82■■□□□ 1.4
HIGD1A-201ENST00000321331 GPAA1O43292 621 aa23.82■■□□□ 1.4
HIGD1A-201ENST00000321331 GNAT2P19087 354 aa23.82■■□□□ 1.4
HIGD1A-201ENST00000321331 TATDN1Q6P1N9 297 aa23.82■■□□□ 1.4
HIGD1A-201ENST00000321331 TICAM2Q86XR7 235 aa23.82■■□□□ 1.4
HIGD1A-201ENST00000321331 ZCCHC17Q9NP64 241 aaKnown RBP23.82■■□□□ 1.4
HIGD1A-201ENST00000321331 TAOK2Q9UL54 1235 aa23.82■■□□□ 1.4
HIGD1A-201ENST00000321331 USP17L5A8MUK1 530 aa23.81■■□□□ 1.4
HIGD1A-201ENST00000321331 NOM1Q5C9Z4 860 aaKnown RBP23.81■■□□□ 1.4
HIGD1A-201ENST00000321331 ZMYM1Q5SVZ6 1142 aa23.81■■□□□ 1.4
HIGD1A-201ENST00000321331 FAM43AQ8N2R8 423 aa23.81■■□□□ 1.4
HIGD1A-201ENST00000321331 AS3MTQ9HBK9 375 aa23.81■■□□□ 1.4
HIGD1A-201ENST00000321331 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.81■■□□□ 1.4
HIGD1A-201ENST00000321331 CASP8AP2Q9UKL3 1982 aa23.81■■□□□ 1.4
HIGD1A-201ENST00000321331 M0R2C6 588 aa23.8■■□□□ 1.4
HIGD1A-201ENST00000321331 GPR25O00155 361 aa23.8■■□□□ 1.4
HIGD1A-201ENST00000321331 GDF11O95390 407 aa23.8■■□□□ 1.4
HIGD1A-201ENST00000321331 TAF1CQ15572 869 aaPredicted RBP23.8■■□□□ 1.4
HIGD1A-201ENST00000321331 GIMAP6Q6P9H5 292 aa23.8■■□□□ 1.4
HIGD1A-201ENST00000321331 FASTKD5Q7L8L6 764 aaKnown RBP23.8■■□□□ 1.4
HIGD1A-201ENST00000321331 ZNF280CQ8ND82 737 aa23.8■■□□□ 1.4
HIGD1A-201ENST00000321331 PHIPQ8WWQ0 1821 aa23.79■■□□□ 1.4
HIGD1A-201ENST00000321331 A0A0G2JLL6 359 aaPredicted RBP23.79■■□□□ 1.4
HIGD1A-201ENST00000321331 TRIM75PA6NK02 468 aa23.79■■□□□ 1.4
HIGD1A-201ENST00000321331 BTBD19C9JJ37 291 aa23.79■■□□□ 1.4
HIGD1A-201ENST00000321331 GABPAQ06546 454 aa23.79■■□□□ 1.4
HIGD1A-201ENST00000321331 CRHR2Q13324 411 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms