RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CDK5RAP2Q96SN8 1893 aa15.19■□□□□ 0.02
CPNE1-201ENST00000317677 CYP2D7A0A087X1C5 515 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 PPEF1O14829 653 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-201ENST00000317677 TPM3P06753 285 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 FDPSP14324 419 aaKnown RBP15.18■□□□□ 0.02
CPNE1-201ENST00000317677 DNM1Q05193 864 aaKnown RBP15.18■□□□□ 0.02
CPNE1-201ENST00000317677 PPARAQ07869 468 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 TRDNQ13061 729 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 FAM173BQ6P4H8 233 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 STK11IPQ8N1F8 1099 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 NACAP1Q9BZK3 213 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 CD209Q9NNX6 404 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 ZSWIM5Q9P217 1185 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 MYH2Q9UKX2 1941 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 KDM4AO75164 1064 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 PDCP20941 246 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 IRX3P78415 501 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-201ENST00000317677 TERF2Q15554 542 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 ZNF804AQ7Z570 1209 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 LY9Q9HBG7 655 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 AATFQ9NY61 560 aaKnown RBP eCLIP15.18■□□□□ 0.02
CPNE1-201ENST00000317677 ANAPC4Q9UJX5 808 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 ANGEL1Q9UNK9 670 aaKnown RBP15.18■□□□□ 0.02
CPNE1-201ENST00000317677 KIF13BQ9NQT8 1826 aa15.18■□□□□ 0.02
CPNE1-201ENST00000317677 GOLGA8BA8MQT2 603 aa15.17■□□□□ 0.02
CPNE1-201ENST00000317677 IL1R1P14778 569 aa15.17■□□□□ 0.02
CPNE1-201ENST00000317677 SP8Q8IXZ3 490 aa15.17■□□□□ 0.02
CPNE1-201ENST00000317677 SYAP1Q96A49 352 aaPredicted RBP15.17■□□□□ 0.02
CPNE1-201ENST00000317677 ATP6V0A2Q9Y487 856 aa15.16■□□□□ 0.02
CPNE1-201ENST00000317677 DLEC1Q9Y238 1755 aa15.16■□□□□ 0.02
CPNE1-201ENST00000317677 MINDY4BA8MYZ0 360 aa15.16■□□□□ 0.02
CPNE1-201ENST00000317677 RIOK3O14730 519 aaKnown RBP15.16■□□□□ 0.02
CPNE1-201ENST00000317677 RESTQ13127 1097 aa15.16■□□□□ 0.02
CPNE1-201ENST00000317677 CTR9Q6PD62 1173 aa15.16■□□□□ 0.02
CPNE1-201ENST00000317677 MFSD6Q6ZSS7 791 aa15.16■□□□□ 0.02
CPNE1-201ENST00000317677 WDR66Q8TBY9 1149 aa15.16■□□□□ 0.02
CPNE1-201ENST00000317677 TMEM87BQ96K49 555 aa15.16■□□□□ 0.02
CPNE1-201ENST00000317677 IGSF3O75054 1194 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 NPR1P16066 1061 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 TGFB2P61812 414 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 DIXDC1Q155Q3 683 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 APOA5Q6Q788 366 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 KIAA1524Q8TCG1 905 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 DCP1AQ9NPI6 582 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-201ENST00000317677 FIBPO43427 364 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 LDHBP07195 334 aaKnown RBP15.15■□□□□ 0.02
CPNE1-201ENST00000317677 YBX3P16989 372 aaKnown RBP eCLIP15.15■□□□□ 0.022e-6■■■■□ 21.8
CPNE1-201ENST00000317677 RXRAP19793 462 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 CDC27P30260 824 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 FOSBP53539 338 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 RRP12Q5JTH9 1297 aaKnown RBP15.15■□□□□ 0.02
CPNE1-201ENST00000317677 TMC4Q7Z404 712 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 SGMS1Q86VZ5 419 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 SLX4Q8IY92 1834 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 NAV1Q8NEY1 1877 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 ZKSCAN3Q9BRR0 538 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 KRT23Q9C075 422 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 CNNM2Q9H8M5 875 aa15.15■□□□□ 0.02
CPNE1-201ENST00000317677 FAM217BQ9NTX9 383 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-201ENST00000317677 C10orf71Q711Q0 1435 aa15.14■□□□□ 0.01
CPNE1-201ENST00000317677 CYP2D6P10635 497 aa15.14■□□□□ 0.01
CPNE1-201ENST00000317677 TMEM67Q5HYA8 995 aa15.14■□□□□ 0.01
CPNE1-201ENST00000317677 SPTY2D1Q68D10 685 aaPredicted RBP15.14■□□□□ 0.01
CPNE1-201ENST00000317677 DZIP1Q86YF9 867 aaKnown RBP15.14■□□□□ 0.01
CPNE1-201ENST00000317677 RGS22Q8NE09 1264 aa15.14■□□□□ 0.01
CPNE1-201ENST00000317677 MYL10Q9BUA6 226 aa15.14■□□□□ 0.01
CPNE1-201ENST00000317677 DDX60LQ5H9U9 1706 aaKnown RBP15.14■□□□□ 0.01
CPNE1-201ENST00000317677 USP17L12C9JPN9 530 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 USP17L21D6R901 530 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 C6orf229H3BNL8 230 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 FGRP09769 529 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 PDE6BP35913 854 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 LIFRP42702 1097 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 GIMAP6Q6P9H5 292 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 FAM53CQ9NYF3 392 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 MKRN1Q9UHC7 482 aaKnown RBP15.13■□□□□ 0.01
CPNE1-201ENST00000317677 ATP6V1DQ9Y5K8 247 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 ZNF646O15015 1829 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-201ENST00000317677 IFIT3O14879 490 aaKnown RBP15.13■□□□□ 0.01
CPNE1-201ENST00000317677 ADD1P35611 737 aaKnown RBP15.13■□□□□ 0.01
CPNE1-201ENST00000317677 TTC6Q86TZ1 520 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 RNF214Q8ND24 703 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 MASTLQ96GX5 879 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 YY1AP1Q9H869 796 aa15.13■□□□□ 0.01
CPNE1-201ENST00000317677 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.13■□□□□ 0.01
CPNE1-201ENST00000317677 ADAMTSL1Q8N6G6 1762 aa15.12■□□□□ 0.01
CPNE1-201ENST00000317677 RIMBP2O15034 1052 aa15.12■□□□□ 0.01
CPNE1-201ENST00000317677 NCBP1Q09161 790 aaKnown RBP15.12■□□□□ 0.01
CPNE1-201ENST00000317677 NTRK3Q16288 839 aa15.12■□□□□ 0.01
CPNE1-201ENST00000317677 TMED8Q6PL24 325 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-201ENST00000317677 SH3RF3Q8TEJ3 882 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-201ENST00000317677 RTFDC1Q9BY42 306 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-201ENST00000317677 CRNKL1Q9BZJ0 848 aaKnown RBP15.12■□□□□ 0.01
CPNE1-201ENST00000317677 TOMM22Q9NS69 142 aa15.12■□□□□ 0.01
CPNE1-201ENST00000317677 NID2Q14112 1375 aa15.12■□□□□ 0.01
CPNE1-201ENST00000317677 MROH7-TTC4A0A0A0MT08 1334 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 METAP2P50579 478 aaKnown RBP eCLIP15.11■□□□□ 0.01
CPNE1-201ENST00000317677 GUCY1B3Q02153 619 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 SEC23AQ15436 765 aa15.11■□□□□ 0.01
CPNE1-201ENST00000317677 OTUD7BQ6GQQ9 843 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms