RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 HARSP12081 509 aaKnown RBP13.4□□□□□ -0.26
AMBRA1-201ENST00000314845 VAV2P52735 878 aa13.4□□□□□ -0.26
AMBRA1-201ENST00000314845 ZNF569Q5MCW4 686 aa13.4□□□□□ -0.26
AMBRA1-201ENST00000314845 KIAA1524Q8TCG1 905 aa13.4□□□□□ -0.26
AMBRA1-201ENST00000314845 CHURC1Q8WUH1 139 aa13.4□□□□□ -0.26
AMBRA1-201ENST00000314845 NSRP1Q9H0G5 558 aaKnown RBP13.4□□□□□ -0.26
AMBRA1-201ENST00000314845 TTF2Q9UNY4 1162 aaKnown RBP13.4□□□□□ -0.26
AMBRA1-201ENST00000314845 DNM3Q9UQ16 869 aa13.4□□□□□ -0.26
AMBRA1-201ENST00000314845 CALUO43852 315 aaPredicted RBP13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 MYCLP12524 364 aaPredicted RBP13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 REXO1Q8N1G1 1221 aaKnown RBP13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 BAG1Q99933 345 aaPredicted RBP13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 MTRF1LQ9UGC7 380 aaKnown RBP13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 ECM2O94769 699 aaPredicted RBP13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 MCM6Q14566 821 aa13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 KARSQ15046 597 aaKnown RBP13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 USP40Q9NVE5 1235 aa13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 KCNG1Q9UIX4 513 aa13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 NDUFB9Q9Y6M9 179 aa13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 E7EWF7 191 aa13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 HERC4Q5GLZ8 1057 aaPredicted RBP13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 CCDC122Q5T0U0 273 aa13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 NCAPH2Q6IBW4 605 aa13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 MYL10Q9BUA6 226 aa13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 CTNND2Q9UQB3 1225 aa13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 GTF2F1P35269 517 aaKnown RBP eCLIP13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 PPARAQ07869 468 aa13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 KRT222Q8N1A0 295 aa13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 AZI2Q9H6S1 392 aa13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
AMBRA1-201ENST00000314845 USP17L12C9JPN9 530 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 USP17L21D6R901 530 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 CLCN1P35523 988 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 OTUD7BQ6GQQ9 843 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 IGSF22Q8N9C0 903 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 PHKBQ93100 1093 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 CLSTN2Q9H4D0 955 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 TMEM94Q12767 1356 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 KCNQ3O43525 872 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 CALCOCO2Q13137 446 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 TTLL7Q6ZT98 887 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 CCDC117Q8IWD4 279 aaPredicted RBP13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 OTUD6BQ8N6M0 293 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 JAKMIP2Q96AA8 810 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 CFBP00751 764 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 ATP2A2P16615 1042 aaKnown RBP13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 TNFAIP3P21580 790 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 PAK1Q13153 545 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 MCTP2Q6DN12 878 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 LEO1Q8WVC0 666 aaPredicted RBP13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 PPM1EQ8WY54 764 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 PPP1R9BQ96SB3 815 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 IRX3P78415 501 aaPredicted RBP13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 TRPC3Q13507 836 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 CDAN1Q8IWY9 1227 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 NLGN1Q8N2Q7 840 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 TTC14Q96N46 770 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 TXNDC16Q9P2K2 825 aa13.38□□□□□ -0.27
AMBRA1-201ENST00000314845 LOC102724428A0A0B4J2F2 783 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 KRT5P13647 590 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 SIK1P57059 783 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 CALCRLQ16602 461 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 ZNF654Q8IZM8 581 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 TTC16Q8NEE8 873 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 CNKSR1Q969H4 720 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 CARD10Q9BWT7 1032 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 VPS16Q9H269 839 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 SEL1L2Q5TEA6 688 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 NOX5Q96PH1 765 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 NAP1L3Q99457 506 aaPredicted RBP13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 NUP58Q9BVL2 599 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 CSRNP2Q9H175 543 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 ZNF202O95125 648 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 BEND3Q5T5X7 828 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 FAM173BQ6P4H8 233 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 ARFGAP2Q8N6H7 521 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 EAF2Q96CJ1 260 aaPredicted RBP13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 ATP8A2Q9NTI2 1148 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 AATKQ6ZMQ8 1374 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 MAP3K15Q6ZN16 1313 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 PDE6AP16499 860 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 CAPZA3Q96KX2 299 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 SYNRGQ9UMZ2 1314 aa13.37□□□□□ -0.27
AMBRA1-201ENST00000314845 BLMP54132 1417 aaPredicted RBP13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 FAM135BQ49AJ0 1406 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 SNX16P57768 344 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 CCDC14Q49A88 953 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 ZNF274Q96GC6 653 aaPredicted RBP13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 PLEKHG1Q9ULL1 1385 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 KDM2BQ8NHM5 1336 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 DNM2P50570 870 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 FBF1Q8TES7 1133 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 NT5C3AQ9H0P0 336 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 ARL1P40616 181 aaPredicted RBP13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 USH1GQ495M9 461 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 SPOPO43791 374 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 PPP1R7Q15435 360 aa13.36□□□□□ -0.27
AMBRA1-201ENST00000314845 ARHGEF25Q86VW2 580 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms