RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 KRT23Q9C075 422 aa12.58□□□□□ -0.4
CASP3-201ENST00000308394 ARPP21Q9UBL0 812 aaPredicted RBP12.58□□□□□ -0.4
CASP3-201ENST00000308394 KIAA1551Q9HCM1 1747 aa12.58□□□□□ -0.4
CASP3-201ENST00000308394 USP17L8P0C7I0 530 aa12.58□□□□□ -0.4
CASP3-201ENST00000308394 FKBP1AP62942 108 aaKnown RBP12.58□□□□□ -0.4
CASP3-201ENST00000308394 APOBRQ0VD83 1088 aa12.58□□□□□ -0.4
CASP3-201ENST00000308394 AMOTL1Q8IY63 956 aa12.58□□□□□ -0.4
CASP3-201ENST00000308394 NIM1KQ8IY84 436 aa12.58□□□□□ -0.4
CASP3-201ENST00000308394 VPS33BQ9H267 617 aa12.58□□□□□ -0.4
CASP3-201ENST00000308394 TACC3Q9Y6A5 838 aa12.58□□□□□ -0.4
CASP3-201ENST00000308394 DDIT3P35638 169 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 ANTXR2P58335 489 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 CYB5R4Q7L1T6 521 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 ARMCX6Q7L4S7 300 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 NKX2-3Q8TAU0 364 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
CASP3-201ENST00000308394 ANAPC4Q9UJX5 808 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.57□□□□□ -0.4
CASP3-201ENST00000308394 CYP2D6P10635 497 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 CRKP46108 304 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 RHBDL3P58872 404 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 EVX2Q03828 476 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 HHIPL2Q6UWX4 724 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 ZSWIM5Q9P217 1185 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 SAP30BPQ9UHR5 308 aaKnown RBP12.57□□□□□ -0.4
CASP3-201ENST00000308394 LAMA4Q16363 1823 aa12.57□□□□□ -0.4
CASP3-201ENST00000308394 PRDM1O75626 825 aa12.56□□□□□ -0.4
CASP3-201ENST00000308394 POLR3DP05423 398 aaPredicted RBP12.56□□□□□ -0.4
CASP3-201ENST00000308394 SLC3A2P08195 630 aaKnown RBP12.56□□□□□ -0.4
CASP3-201ENST00000308394 PICALMQ13492 652 aa12.56□□□□□ -0.4
CASP3-201ENST00000308394 CCDC96Q2M329 555 aa12.56□□□□□ -0.4
CASP3-201ENST00000308394 PDCL3Q9H2J4 239 aa12.56□□□□□ -0.4
CASP3-201ENST00000308394 USP40Q9NVE5 1235 aa12.56□□□□□ -0.4
CASP3-201ENST00000308394 ZNRF3Q9ULT6 936 aa12.56□□□□□ -0.4
CASP3-201ENST00000308394 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
CASP3-201ENST00000308394 UTRNP46939 3433 aa12.56□□□□□ -0.4
CASP3-201ENST00000308394 DTNBO60941 627 aa12.56□□□□□ -0.4
CASP3-201ENST00000308394 SBK1Q52WX2 424 aa12.56□□□□□ -0.4
CASP3-201ENST00000308394 TRIM44Q96DX7 344 aaPredicted RBP12.56□□□□□ -0.4
CASP3-201ENST00000308394 AGXT2Q9BYV1 514 aa12.56□□□□□ -0.4
CASP3-201ENST00000308394 MKRN1Q9UHC7 482 aaKnown RBP12.56□□□□□ -0.4
CASP3-201ENST00000308394 SMC3Q9UQE7 1217 aa12.56□□□□□ -0.4
CASP3-201ENST00000308394 SCN9AQ15858 1988 aa12.56□□□□□ -0.4
CASP3-201ENST00000308394 BAZ2AQ9UIF9 1905 aaKnown RBP12.56□□□□□ -0.4
CASP3-201ENST00000308394 NFKBIEO00221 500 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 PSMD14O00487 310 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 RANBP6O60518 1105 aaKnown RBP12.55□□□□□ -0.4
CASP3-201ENST00000308394 ESR2Q92731 530 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 ZKSCAN3Q9BRR0 538 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 FHDC1Q9C0D6 1143 aaPredicted RBP12.55□□□□□ -0.4
CASP3-201ENST00000308394 IFIT3O14879 490 aaKnown RBP12.55□□□□□ -0.4
CASP3-201ENST00000308394 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 APOBEC3HQ6NTF7 200 aaKnown RBP12.55□□□□□ -0.4
CASP3-201ENST00000308394 RSBN1LQ6PCB5 846 aaPredicted RBP12.55□□□□□ -0.4
CASP3-201ENST00000308394 PCDHAC2Q9Y5I4 1007 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 FLT1P17948 1338 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 WDR19Q8NEZ3 1342 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 CCT2P78371 535 aaKnown RBP12.55□□□□□ -0.4
CASP3-201ENST00000308394 PDE4BQ07343 736 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 TMEM67Q5HYA8 995 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 FBXL16Q8N461 479 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 TMEM87BQ96K49 555 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 ZDHHC15Q96MV8 337 aa12.55□□□□□ -0.4
CASP3-201ENST00000308394 ANGEL1Q9UNK9 670 aaKnown RBP12.55□□□□□ -0.4
CASP3-201ENST00000308394 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
CASP3-201ENST00000308394 KLF18A0A0U1RQI7 1052 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 ERICH2A1L162 156 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 PLCD1P51178 756 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 RASSF7Q02833 373 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 ST3GAL1Q11201 340 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 SART3Q15020 963 aaKnown RBP12.54□□□□□ -0.4
CASP3-201ENST00000308394 CDC42EP5Q6NZY7 148 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 NFXL1Q6ZNB6 911 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 MRIQ9BWK5 157 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 SERPINA10Q9UK55 444 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 COL4A5P29400 1685 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 BRCA1P38398 1863 aaKnown RBP12.54□□□□□ -0.4
CASP3-201ENST00000308394 VIL1P09327 827 aaKnown RBP12.54□□□□□ -0.4
CASP3-201ENST00000308394 PCP11498 1178 aaKnown RBP12.54□□□□□ -0.4
CASP3-201ENST00000308394 PDIA3P30101 505 aaKnown RBP12.54□□□□□ -0.4
CASP3-201ENST00000308394 HDLBPQ00341 1268 aaKnown RBP12.54□□□□□ -0.4
CASP3-201ENST00000308394 GTF3C6Q969F1 213 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 DYNLL2Q96FJ2 89 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 ZNF274Q96GC6 653 aaPredicted RBP12.54□□□□□ -0.4
CASP3-201ENST00000308394 UBAC1Q9BSL1 405 aa12.54□□□□□ -0.4
CASP3-201ENST00000308394 ZHX1Q9UKY1 873 aaPredicted RBP12.54□□□□□ -0.4
CASP3-201ENST00000308394 MYO3BQ8WXR4 1341 aa12.53□□□□□ -0.4
CASP3-201ENST00000308394 SH2B2O14492 632 aaPredicted RBP12.53□□□□□ -0.4
CASP3-201ENST00000308394 GJB2P29033 226 aa12.53□□□□□ -0.4
CASP3-201ENST00000308394 NUCB2P80303 420 aa12.53□□□□□ -0.4
CASP3-201ENST00000308394 SCRN1Q12765 414 aa12.53□□□□□ -0.4
CASP3-201ENST00000308394 PKP1Q13835 747 aa12.53□□□□□ -0.4
CASP3-201ENST00000308394 RAB11FIP4Q86YS3 637 aa12.53□□□□□ -0.4
CASP3-201ENST00000308394 OGFOD1Q8N543 542 aa12.53□□□□□ -0.4
CASP3-201ENST00000308394 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
CASP3-201ENST00000308394 MKNK2Q9HBH9 465 aa12.53□□□□□ -0.4
CASP3-201ENST00000308394 PFKFB2O60825 505 aa12.53□□□□□ -0.4
CASP3-201ENST00000308394 CXCL9Q07325 125 aa12.53□□□□□ -0.4
CASP3-201ENST00000308394 CFAP100Q494V2 611 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms