RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 TBX2Q13207 712 aaPredicted RBP16.68■□□□□ 0.26
COL6A2-201ENST00000300527 TMEM67Q5HYA8 995 aa16.68■□□□□ 0.26
COL6A2-201ENST00000300527 SEC31BQ9NQW1 1179 aa16.68■□□□□ 0.26
COL6A2-201ENST00000300527 ANGEL1Q9UNK9 670 aaKnown RBP16.68■□□□□ 0.26
COL6A2-201ENST00000300527 NR5A1Q13285 461 aa16.68■□□□□ 0.26
COL6A2-201ENST00000300527 DNAJC21Q5F1R6 531 aaKnown RBP16.68■□□□□ 0.26
COL6A2-201ENST00000300527 TTLL7Q6ZT98 887 aa16.68■□□□□ 0.26
COL6A2-201ENST00000300527 DACH1Q9UI36 760 aa16.68■□□□□ 0.26
COL6A2-201ENST00000300527 MAPK8IP1Q9UQF2 711 aa16.68■□□□□ 0.26
COL6A2-201ENST00000300527 AXIN2Q9Y2T1 843 aa16.68■□□□□ 0.26
COL6A2-201ENST00000300527 hCG_1642624A0A1W2PR95 340 aa16.68■□□□□ 0.26
COL6A2-201ENST00000300527 MAP2K7O14733 419 aa16.68■□□□□ 0.26
COL6A2-201ENST00000300527 CDKL5O76039 1030 aa16.68■□□□□ 0.26
COL6A2-201ENST00000300527 IL15P40933 162 aaPredicted RBP16.68■□□□□ 0.26
COL6A2-201ENST00000300527 TRIM10Q9UDY6 481 aa16.68■□□□□ 0.26
COL6A2-201ENST00000300527 LRRIQ3A6PVS8 624 aaPredicted RBP16.67■□□□□ 0.26
COL6A2-201ENST00000300527 PPARDQ03181 441 aa16.67■□□□□ 0.26
COL6A2-201ENST00000300527 DIS3L2Q8IYB7 885 aaKnown RBP16.67■□□□□ 0.26
COL6A2-201ENST00000300527 LRRC37A3O60309 1634 aa16.67■□□□□ 0.26
COL6A2-201ENST00000300527 EYA2O00167 538 aa16.67■□□□□ 0.26
COL6A2-201ENST00000300527 PPP6R2O75170 966 aa16.67■□□□□ 0.26
COL6A2-201ENST00000300527 GUCY1A2P33402 732 aa16.67■□□□□ 0.26
COL6A2-201ENST00000300527 NOP2P46087 812 aaKnown RBP16.67■□□□□ 0.26
COL6A2-201ENST00000300527 FILIP1LQ4L180 1135 aa16.67■□□□□ 0.26
COL6A2-201ENST00000300527 TTC19Q6DKK2 380 aaPredicted RBP16.67■□□□□ 0.26
COL6A2-201ENST00000300527 TBC1D10CQ8IV04 446 aa16.67■□□□□ 0.26
COL6A2-201ENST00000300527 GPIHBP1Q8IV16 184 aa16.67■□□□□ 0.26
COL6A2-201ENST00000300527 XAGE2Q96GT9 111 aa16.67■□□□□ 0.26
COL6A2-201ENST00000300527 NAPGQ99747 312 aaPredicted RBP16.67■□□□□ 0.26
COL6A2-201ENST00000300527 EFCC1Q9HA90 598 aa16.67■□□□□ 0.26
COL6A2-201ENST00000300527 HDAC6Q9UBN7 1215 aa16.67■□□□□ 0.26
COL6A2-201ENST00000300527 ANKARQ7Z5J8 1434 aa16.67■□□□□ 0.26
COL6A2-201ENST00000300527 IFIT3O14879 490 aaKnown RBP16.66■□□□□ 0.26
COL6A2-201ENST00000300527 RNF40O75150 1001 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 MRPS25P82663 173 aaKnown RBP16.66■□□□□ 0.26
COL6A2-201ENST00000300527 L1RE1Q9UN81 338 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 JRKLQ9Y4A0 524 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 N4BP3O15049 544 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 SRGAP2O75044 1071 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 SNRPA1P09661 255 aaKnown RBP16.66■□□□□ 0.26
COL6A2-201ENST00000300527 SSRP1Q08945 709 aaKnown RBP16.66■□□□□ 0.26
COL6A2-201ENST00000300527 ICE2Q659A1 982 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 APOA5Q6Q788 366 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 CAGE1Q8TC20 777 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 SMARCC1Q92922 1105 aaPredicted RBP16.66■□□□□ 0.26
COL6A2-201ENST00000300527 ACBD3Q9H3P7 528 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 PCDHB6Q9Y5E3 794 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 CCDC57Q2TAC2 916 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 LRRC31Q6UY01 552 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 MLKLQ8NB16 471 aa16.66■□□□□ 0.26
COL6A2-201ENST00000300527 FXR1P51114 621 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL6A2-201ENST00000300527 KCNH5Q8NCM2 988 aa16.65■□□□□ 0.26
COL6A2-201ENST00000300527 MAP3K14Q99558 947 aa16.65■□□□□ 0.26
COL6A2-201ENST00000300527 ATG3Q9NT62 314 aa16.65■□□□□ 0.26
COL6A2-201ENST00000300527 SLC12A7Q9Y666 1083 aa16.65■□□□□ 0.26
COL6A2-201ENST00000300527 ZMYM6O95789 1325 aa16.65■□□□□ 0.26
COL6A2-201ENST00000300527 FOXP2O15409 715 aa16.65■□□□□ 0.26
COL6A2-201ENST00000300527 MED15Q96RN5 788 aa16.65■□□□□ 0.26
COL6A2-201ENST00000300527 SLC52A2Q9HAB3 445 aa16.65■□□□□ 0.26
COL6A2-201ENST00000300527 CABP5Q9NP86 173 aa16.65■□□□□ 0.26
COL6A2-201ENST00000300527 POTEB2H3BUK9 544 aa16.65■□□□□ 0.26
COL6A2-201ENST00000300527 RANBP6O60518 1105 aaKnown RBP16.65■□□□□ 0.26
COL6A2-201ENST00000300527 LIG3P49916 1009 aa16.65■□□□□ 0.26
COL6A2-201ENST00000300527 RABL6Q3YEC7 729 aaPredicted RBP16.65■□□□□ 0.26
COL6A2-201ENST00000300527 ENOX1Q8TC92 643 aaKnown RBP16.65■□□□□ 0.26
COL6A2-201ENST00000300527 TAB2Q9NYJ8 693 aa16.65■□□□□ 0.26
COL6A2-201ENST00000300527 SYNRGQ9UMZ2 1314 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 IBSPP21815 317 aaPredicted RBP16.64■□□□□ 0.25
COL6A2-201ENST00000300527 CTDSPL2Q05D32 466 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 CTR9Q6PD62 1173 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 AFAP1L1Q8TED9 768 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 CWC25Q9NXE8 425 aaPredicted RBP16.64■□□□□ 0.25
COL6A2-201ENST00000300527 PSD3Q9NYI0 1048 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 CTNND2Q9UQB3 1225 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 FOXO4P98177 505 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 CCDC148Q8NFR7 591 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 EEF2KMTQ96G04 330 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 CSRNP2Q9H175 543 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 BLZF1Q9H2G9 400 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 DEF6Q9H4E7 631 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 PIK3C2AO00443 1686 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 MAGEA9P43362 315 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 NR1I3Q14994 352 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 NOSTRINQ8IVI9 506 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 APPBP2Q92624 585 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 EPSTI1Q96J88 318 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 GBP3Q9H0R5 595 aa16.64■□□□□ 0.25
COL6A2-201ENST00000300527 NALCNQ8IZF0 1738 aa16.63■□□□□ 0.25
COL6A2-201ENST00000300527 DIP2BQ9P265 1576 aa16.63■□□□□ 0.25
COL6A2-201ENST00000300527 LOC102724159A0A0B4J2E5 919 aa16.63■□□□□ 0.25
COL6A2-201ENST00000300527 ZNF18P17022 549 aa16.63■□□□□ 0.25
COL6A2-201ENST00000300527 PWP2Q15269 919 aaKnown RBP16.63■□□□□ 0.25
COL6A2-201ENST00000300527 PLEKHG1Q9ULL1 1385 aa16.63■□□□□ 0.25
COL6A2-201ENST00000300527 A1BGP04217 495 aa16.63■□□□□ 0.25
COL6A2-201ENST00000300527 FAM71BQ8TC56 605 aa16.63■□□□□ 0.25
COL6A2-201ENST00000300527 CRACR2AQ9BSW2 395 aa16.63■□□□□ 0.25
COL6A2-201ENST00000300527 POLD4Q9HCU8 107 aa16.63■□□□□ 0.25
COL6A2-201ENST00000300527 TSPOAP1O95153 1857 aa16.63■□□□□ 0.25
COL6A2-201ENST00000300527 UBN2Q6ZU65 1347 aa16.63■□□□□ 0.25
COL6A2-201ENST00000300527 FAM205CA6NFA0 338 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms