RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CCDC105Q8IYK2 499 aa16.52■□□□□ 0.23
SCN3B-201ENST00000299333 FRMD4BQ9Y2L6 1034 aa16.52■□□□□ 0.23
SCN3B-201ENST00000299333 ANO1Q5XXA6 986 aa16.51■□□□□ 0.23
SCN3B-201ENST00000299333 RRP36Q96EU6 259 aaKnown RBP16.51■□□□□ 0.23
SCN3B-201ENST00000299333 CHPF2Q9P2E5 772 aa16.51■□□□□ 0.23
SCN3B-201ENST00000299333 CCT5P48643 541 aa16.51■□□□□ 0.23
SCN3B-201ENST00000299333 ATP2B3Q16720 1220 aa16.51■□□□□ 0.23
SCN3B-201ENST00000299333 IRAK4Q9NWZ3 460 aa16.51■□□□□ 0.23
SCN3B-201ENST00000299333 IQGAP2Q13576 1575 aa16.51■□□□□ 0.23
SCN3B-201ENST00000299333 DACT3Q96B18 629 aaPredicted RBP16.51■□□□□ 0.23
SCN3B-201ENST00000299333 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
SCN3B-201ENST00000299333 RRP15Q9Y3B9 282 aaKnown RBP16.51■□□□□ 0.23
SCN3B-201ENST00000299333 KIAA0586Q9BVV6 1533 aa16.51■□□□□ 0.23
SCN3B-201ENST00000299333 POLR2DO15514 142 aaKnown RBP16.51■□□□□ 0.23
SCN3B-201ENST00000299333 PPFIA2O75334 1257 aa16.51■□□□□ 0.23
SCN3B-201ENST00000299333 PAK1Q13153 545 aa16.51■□□□□ 0.23
SCN3B-201ENST00000299333 SPATS2Q86XZ4 545 aaKnown RBP16.51■□□□□ 0.23
SCN3B-201ENST00000299333 KIFAP3Q92845 792 aa16.51■□□□□ 0.23
SCN3B-201ENST00000299333 TMED1Q13445 227 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 RPS6KA1Q15418 735 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 NUP58Q9BVL2 599 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 LMBRD1Q9NUN5 540 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 NFE2L3Q9Y4A8 694 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 TROVE2P10155 538 aaKnown RBP eCLIP16.5■□□□□ 0.23
SCN3B-201ENST00000299333 PPP2R5DQ14738 602 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 SLMAPQ14BN4 828 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 DCTPP1Q9H773 170 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 SAR1BQ9Y6B6 198 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 TTC41PQ6P2S7 1318 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 RNF113AO15541 343 aaKnown RBP16.5■□□□□ 0.23
SCN3B-201ENST00000299333 ZNF500O60304 480 aaPredicted RBP16.5■□□□□ 0.23
SCN3B-201ENST00000299333 ADKP55263 362 aaKnown RBP16.5■□□□□ 0.23
SCN3B-201ENST00000299333 AFAP1L2Q8N4X5 818 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 USP6NLQ92738 828 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 CTTNBP2NLQ9P2B4 639 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 SPDYE3A6NKU9 549 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 TBC1D8O95759 1140 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 CCDC92Q53HC0 331 aaPredicted RBP16.5■□□□□ 0.23
SCN3B-201ENST00000299333 ANKRD13DQ6ZTN6 518 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 GSTO1P78417 241 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 VPS37BQ9H9H4 285 aa16.5■□□□□ 0.23
SCN3B-201ENST00000299333 TTLL12Q14166 644 aaPredicted RBP16.49■□□□□ 0.23
SCN3B-201ENST00000299333 ZKSCAN3Q9BRR0 538 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 SNAPC4Q5SXM2 1469 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 E2F5Q15329 346 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 PPP1R9AQ9ULJ8 1098 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 MX2P20592 715 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 PPP2R5CQ13362 524 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 CEP85Q6P2H3 762 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 KSR1Q8IVT5 923 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 MLKLQ8NB16 471 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 XPO4Q9C0E2 1151 aaKnown RBP16.49■□□□□ 0.23
SCN3B-201ENST00000299333 PDE11AQ9HCR9 933 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 FAM135AQ9P2D6 1515 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 MAP3K7CLP57077 242 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 IRX4P78413 519 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 TSKSQ9UJT2 592 aa16.49■□□□□ 0.23
SCN3B-201ENST00000299333 ZNF202O95125 648 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 PPP1R2P41236 205 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 TMEM63CQ9P1W3 806 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 KIF14Q15058 1648 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 BCAP29Q9UHQ4 241 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 BIRC3Q13489 604 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 LETM2Q2VYF4 491 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 NBPF6Q5VWK0 638 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 CNNM4Q6P4Q7 775 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 PEX26Q7Z412 305 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 THEMISQ8N1K5 641 aaPredicted RBP16.48■□□□□ 0.23
SCN3B-201ENST00000299333 C8orf58Q8NAV2 365 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 CFAP61Q8NHU2 1237 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 NBPF4Q96M43 638 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 FAN1Q9Y2M0 1017 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 PLCD1P51178 756 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 SCAF11Q99590 1463 aaKnown RBP16.48■□□□□ 0.23
SCN3B-201ENST00000299333 RPS6KB1P23443 525 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 RILPL1Q5EBL4 403 aa16.48■□□□□ 0.23
SCN3B-201ENST00000299333 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
SCN3B-201ENST00000299333 EFCAB8A8MWE9 144 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 DTNBO60941 627 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 GNA11P29992 359 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 WDR44Q5JSH3 913 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 MAP3K21Q5TCX8 1036 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 LGSNQ5TDP6 509 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 LMBR1LQ6UX01 489 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 TRMT44Q8IYL2 757 aaKnown RBP16.47■□□□□ 0.23
SCN3B-201ENST00000299333 RAD50Q92878 1312 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 STX10O60499 249 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 LRMPQ12912 555 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 RASEFQ8IZ41 740 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 FAM71BQ8TC56 605 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 DESI2Q9BSY9 194 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 USTQ9Y2C2 406 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 MAGEB6P1A0A0J9YX57 407 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 GRM8O00222 908 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 PICALMQ13492 652 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 Q9H521 79 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 SLC24A3Q9HC58 644 aa16.47■□□□□ 0.23
SCN3B-201ENST00000299333 FAM170AA1A519 330 aa16.46■□□□□ 0.23
SCN3B-201ENST00000299333 GIPC1O14908 333 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms