RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 HLA-DOAP06340 250 aa14.56□□□□□ -0.08
HMGB2-201ENST00000296503 LRRFIP1Q32MZ4 808 aaKnown RBP14.56□□□□□ -0.08
HMGB2-201ENST00000296503 FOXP4Q8IVH2 680 aaPredicted RBP14.56□□□□□ -0.08
HMGB2-201ENST00000296503 LCORLQ8N3X6 602 aa14.56□□□□□ -0.08
HMGB2-201ENST00000296503 CRACR2BQ8N4Y2 399 aaPredicted RBP14.56□□□□□ -0.08
HMGB2-201ENST00000296503 STAP2Q9UGK3 403 aa14.56□□□□□ -0.08
HMGB2-201ENST00000296503 SPDYE5A6NIY4 337 aa14.55□□□□□ -0.08
HMGB2-201ENST00000296503 PHF20L1A8MW92 1017 aa14.55□□□□□ -0.08
HMGB2-201ENST00000296503 RNF113AO15541 343 aaKnown RBP14.55□□□□□ -0.08
HMGB2-201ENST00000296503 MBD4O95243 580 aa14.55□□□□□ -0.08
HMGB2-201ENST00000296503 ANP32AP39687 249 aaKnown RBP14.55□□□□□ -0.08
HMGB2-201ENST00000296503 PICK1Q9NRD5 415 aa14.55□□□□□ -0.08
HMGB2-201ENST00000296503 THSD7BQ9C0I4 1608 aa14.55□□□□□ -0.08
HMGB2-201ENST00000296503 CTNND1O60716 968 aaKnown RBP14.55□□□□□ -0.08
HMGB2-201ENST00000296503 POLR3DP05423 398 aaPredicted RBP14.55□□□□□ -0.08
HMGB2-201ENST00000296503 HSPA8P11142 646 aaKnown RBP14.55□□□□□ -0.08
HMGB2-201ENST00000296503 SDR42E1Q8WUS8 393 aa14.55□□□□□ -0.08
HMGB2-201ENST00000296503 FSD1Q9BTV5 496 aa14.55□□□□□ -0.08
HMGB2-201ENST00000296503 PUS7LQ9H0K6 701 aaKnown RBP14.55□□□□□ -0.08
HMGB2-201ENST00000296503 HERC5Q9UII4 1024 aaKnown RBP14.55□□□□□ -0.08
HMGB2-201ENST00000296503 ZFYP08048 801 aaPredicted RBP14.54□□□□□ -0.08
HMGB2-201ENST00000296503 GTF2A2P52657 109 aa14.54□□□□□ -0.08
HMGB2-201ENST00000296503 PPATQ06203 517 aa14.54□□□□□ -0.08
HMGB2-201ENST00000296503 NOL9Q5SY16 702 aaKnown RBP14.54□□□□□ -0.08
HMGB2-201ENST00000296503 TTC6Q86TZ1 520 aa14.54□□□□□ -0.08
HMGB2-201ENST00000296503 SCYL3Q8IZE3 742 aa14.54□□□□□ -0.08
HMGB2-201ENST00000296503 MCM9Q9NXL9 1143 aa14.54□□□□□ -0.08
HMGB2-201ENST00000296503 COL2A1P02458 1487 aaPredicted RBP14.54□□□□□ -0.08
HMGB2-201ENST00000296503 IRF6O14896 467 aa14.53□□□□□ -0.08
HMGB2-201ENST00000296503 PRKAB2O43741 272 aa14.53□□□□□ -0.08
HMGB2-201ENST00000296503 PPIL2Q13356 520 aa14.53□□□□□ -0.08
HMGB2-201ENST00000296503 OTUD7BQ6GQQ9 843 aa14.53□□□□□ -0.08
HMGB2-201ENST00000296503 SAGE1Q9NXZ1 904 aa14.53□□□□□ -0.08
HMGB2-201ENST00000296503 OTOFQ9HC10 1997 aa14.53□□□□□ -0.08
HMGB2-201ENST00000296503 CCL15-CCL14A0A0B4J2E2 113 aa14.52□□□□□ -0.08
HMGB2-201ENST00000296503 CCL15Q16663 113 aa14.52□□□□□ -0.08
HMGB2-201ENST00000296503 IFNL1Q8IU54 200 aa14.52□□□□□ -0.08
HMGB2-201ENST00000296503 PLEKHM2Q8IWE5 1019 aa14.52□□□□□ -0.08
HMGB2-201ENST00000296503 APPBP2Q92624 585 aa14.52□□□□□ -0.08
HMGB2-201ENST00000296503 EVI5LQ96CN4 794 aa14.52□□□□□ -0.08
HMGB2-201ENST00000296503 DDRGK1Q96HY6 314 aa14.52□□□□□ -0.08
HMGB2-201ENST00000296503 SLC4A4Q9Y6R1 1079 aa14.52□□□□□ -0.08
HMGB2-201ENST00000296503 ZHX2Q9Y6X8 837 aa14.52□□□□□ -0.08
HMGB2-201ENST00000296503 CDK5RAP2Q96SN8 1893 aa14.52□□□□□ -0.09
HMGB2-201ENST00000296503 TRIM6-TRIM34B2RNG4 842 aa14.52□□□□□ -0.09
HMGB2-201ENST00000296503 TBC1D8O95759 1140 aa14.52□□□□□ -0.09
HMGB2-201ENST00000296503 ALDH1A1P00352 501 aa14.52□□□□□ -0.09
HMGB2-201ENST00000296503 SNAPC2Q13487 334 aa14.52□□□□□ -0.09
HMGB2-201ENST00000296503 OSBP2Q969R2 916 aa14.52□□□□□ -0.09
HMGB2-201ENST00000296503 MS4A4AQ96JQ5 239 aa14.52□□□□□ -0.09
HMGB2-201ENST00000296503 DCP1AQ9NPI6 582 aaPredicted RBP14.52□□□□□ -0.09
HMGB2-201ENST00000296503 PRDM10Q9NQV6 1147 aa14.52□□□□□ -0.09
HMGB2-201ENST00000296503 ATP8A2Q9NTI2 1148 aa14.52□□□□□ -0.09
HMGB2-201ENST00000296503 CETPP11597 493 aa14.51□□□□□ -0.09
HMGB2-201ENST00000296503 PTPRAP18433 802 aa14.51□□□□□ -0.09
HMGB2-201ENST00000296503 CAP2P40123 477 aa14.51□□□□□ -0.09
HMGB2-201ENST00000296503 PLCD1P51178 756 aa14.51□□□□□ -0.09
HMGB2-201ENST00000296503 COL13A1Q5TAT6 717 aaPredicted RBP14.51□□□□□ -0.09
HMGB2-201ENST00000296503 RILPL2Q969X0 211 aa14.51□□□□□ -0.09
HMGB2-201ENST00000296503 MYH1P12882 1939 aa14.51□□□□□ -0.09
HMGB2-201ENST00000296503 MYH7P12883 1935 aa14.51□□□□□ -0.09
HMGB2-201ENST00000296503 TESPA1A2RU30 521 aaPredicted RBP14.5□□□□□ -0.09
HMGB2-201ENST00000296503 IGF2BP3O00425 579 aaKnown RBP eCLIP14.5□□□□□ -0.09
HMGB2-201ENST00000296503 METTL16Q86W50 562 aaKnown RBP14.5□□□□□ -0.09
HMGB2-201ENST00000296503 AMOTL1Q8IY63 956 aa14.5□□□□□ -0.09
HMGB2-201ENST00000296503 STRBPQ96SI9 672 aaKnown RBP14.5□□□□□ -0.09
HMGB2-201ENST00000296503 PTPN18Q99952 460 aa14.5□□□□□ -0.09
HMGB2-201ENST00000296503 SERPINB13Q9UIV8 391 aa14.5□□□□□ -0.09
HMGB2-201ENST00000296503 FOCADQ5VW36 1801 aa14.5□□□□□ -0.09
HMGB2-201ENST00000296503 RRP1BQ14684 758 aaKnown RBP14.5□□□□□ -0.09
HMGB2-201ENST00000296503 BRI3BPQ8WY22 251 aa14.5□□□□□ -0.09
HMGB2-201ENST00000296503 CXCL11O14625 94 aa14.49□□□□□ -0.09
HMGB2-201ENST00000296503 GPAA1O43292 621 aa14.49□□□□□ -0.09
HMGB2-201ENST00000296503 APPP05067 770 aa14.49□□□□□ -0.09
HMGB2-201ENST00000296503 CCDC84Q86UT8 332 aaPredicted RBP14.49□□□□□ -0.09
HMGB2-201ENST00000296503 SEC62Q99442 399 aaKnown RBP14.49□□□□□ -0.09
HMGB2-201ENST00000296503 EHD4Q9H223 541 aa14.49□□□□□ -0.09
HMGB2-201ENST00000296503 OSBPL3Q9H4L5 887 aa14.49□□□□□ -0.09
HMGB2-201ENST00000296503 DNAJC18Q9H819 358 aa14.49□□□□□ -0.09
HMGB2-201ENST00000296503 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.49□□□□□ -0.09
HMGB2-201ENST00000296503 USP17L12C9JPN9 530 aa14.48□□□□□ -0.09
HMGB2-201ENST00000296503 USP17L21D6R901 530 aa14.48□□□□□ -0.09
HMGB2-201ENST00000296503 M0R2C6 588 aa14.48□□□□□ -0.09
HMGB2-201ENST00000296503 GDF11O95390 407 aa14.48□□□□□ -0.09
HMGB2-201ENST00000296503 ZMYM1Q5SVZ6 1142 aa14.48□□□□□ -0.09
HMGB2-201ENST00000296503 KCNH4Q9UQ05 1017 aa14.48□□□□□ -0.09
HMGB2-201ENST00000296503 AFG3L2Q9Y4W6 797 aa14.48□□□□□ -0.09
HMGB2-201ENST00000296503 TRIM75PA6NK02 468 aa14.48□□□□□ -0.09
HMGB2-201ENST00000296503 USP17L5A8MUK1 530 aa14.48□□□□□ -0.09
HMGB2-201ENST00000296503 ASNSP08243 561 aa14.48□□□□□ -0.09
HMGB2-201ENST00000296503 CYP2D6P10635 497 aa14.48□□□□□ -0.09
HMGB2-201ENST00000296503 GNAT2P19087 354 aa14.48□□□□□ -0.09
HMGB2-201ENST00000296503 CERKLQ49MI3 558 aaPredicted RBP14.48□□□□□ -0.09
HMGB2-201ENST00000296503 TATDN1Q6P1N9 297 aa14.47□□□□□ -0.09
HMGB2-201ENST00000296503 FAM43AQ8N2R8 423 aa14.47□□□□□ -0.09
HMGB2-201ENST00000296503 R3HDMLQ9H3Y0 253 aa14.47□□□□□ -0.09
HMGB2-201ENST00000296503 AS3MTQ9HBK9 375 aa14.47□□□□□ -0.09
HMGB2-201ENST00000296503 CYP2D7A0A087X1C5 515 aa14.46□□□□□ -0.09
HMGB2-201ENST00000296503 GSG1L2A8MUP6 293 aa14.46□□□□□ -0.09
HMGB2-201ENST00000296503 PATL2C9JE40 543 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms