RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TBC1D9BQ66K14 1250 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 KLHDC4Q8TBB5 520 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 PPM1EQ8WY54 764 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 RAD50Q92878 1312 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 PPP2R3AQ06190 1150 aa12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 TCEANC2Q96MN5 208 aa12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 MTFR1LQ9H019 292 aa12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 AS3MTQ9HBK9 375 aa12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 SSRP1Q08945 709 aaKnown RBP12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 DBNDD2Q9BQY9 259 aa12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 USP26Q9BXU7 913 aa12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 ZSCAN16Q9H4T2 348 aaPredicted RBP12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 MBD4O95243 580 aa12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 KARSQ15046 597 aaKnown RBP12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 DNAJC21Q5F1R6 531 aaKnown RBP12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 HDXQ7Z353 690 aa12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 ABCC4O15439 1325 aa12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 ATP10DQ9P241 1426 aa12.88□□□□□ -0.35
NPC1L1-201ENST00000289547 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 NAA25Q14CX7 972 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 OTUD7BQ6GQQ9 843 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 USP44Q9H0E7 712 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 IFNKQ9P0W0 207 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 CEP131Q9UPN4 1083 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 ZEB2O60315 1214 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 USP40Q9NVE5 1235 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 COL5A2P05997 1499 aaPredicted RBP12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 CALM1P0DP23 149 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 CALM2P0DP24 149 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 CALM3P0DP25 149 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 NFIXQ14938 502 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 CNKSR2Q8WXI2 1034 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 SCLT1Q96NL6 688 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 CARD6Q9BX69 1037 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 BSDC1Q9NW68 430 aaPredicted RBP12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 SMC1AQ14683 1233 aaKnown RBP12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 ARHGEF6Q15052 776 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 CCDC114Q96M63 670 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 RNF181Q9P0P0 153 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 NRKQ7Z2Y5 1582 aa12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 ARHGEF28Q8N1W1 1705 aaKnown RBP12.87□□□□□ -0.35
NPC1L1-201ENST00000289547 PDE8BO95263 885 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 OAS2P29728 719 aaKnown RBP12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 KIAA0825Q8IV33 1275 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 LINC00116Q8NCU8 138 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 NEK11Q8NG66 645 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 TNS2Q63HR2 1409 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 MYO3BQ8WXR4 1341 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 SUPT20HL1Q3ZLR7 823 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 PPP4R3AQ6IN85 833 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 NAA15Q9BXJ9 866 aaKnown RBP12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 COA1Q9GZY4 146 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 AOX1Q06278 1338 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 BANK1Q8NDB2 785 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 MYCBPQ99417 103 aaPredicted RBP12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 A0A1B0GUA9 196 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 OPA1O60313 960 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 PABPC4Q13310 644 aaKnown RBP eCLIP12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 PLS1Q14651 629 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 HLFQ16534 295 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 CCDC102BQ68D86 513 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 CCDC121Q6ZUS5 278 aa12.86□□□□□ -0.35
NPC1L1-201ENST00000289547 CTAGE9A4FU28 777 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 GADD45BO75293 160 aaPredicted RBP12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 MAP2K2P36507 400 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 SYCP1Q15431 976 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 APPBP2Q92624 585 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 RAB34Q9BZG1 259 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 RTL9Q8NET4 1388 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 IQCA1LA6NCM1 817 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 GYG1P46976 350 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 NLRP5P59047 1200 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 SARNPP82979 210 aaKnown RBP12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 MRPS27Q92552 414 aaKnown RBP12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 VAT1LQ9HCJ6 419 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 LZTFL1Q9NQ48 299 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 BIN2Q9UBW5 565 aaPredicted RBP12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 CCDC194A0A1B0GVG4 234 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 CKAP4Q07065 602 aaKnown RBP12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 NMIQ13287 307 aaPredicted RBP12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 KIF22Q14807 665 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 ILDR1Q86SU0 546 aaPredicted RBP12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 GOPCQ9HD26 462 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 COPRSQ9NQ92 184 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 AATFQ9NY61 560 aaKnown RBP eCLIP12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 SAP30BPQ9UHR5 308 aaKnown RBP12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 CDHR2Q9BYE9 1310 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 USP17L3A6NCW0 530 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 USP17L4A6NCW7 530 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 CLGNO14967 610 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 USP17L1Q7RTZ2 530 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 GPR108Q9NPR9 543 aa12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 ZNF215Q9UL58 517 aaPredicted RBP12.85□□□□□ -0.35
NPC1L1-201ENST00000289547 PRKG1Q13976 671 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 ARMC9Q7Z3E5 817 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 ZHX3Q9H4I2 956 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms