RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 GRAMD1CQ8IYS0 662 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 NAPBQ9H115 298 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 ARGLU1Q9NWB6 273 aaPredicted RBP15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 HOOK1Q9UJC3 728 aaKnown RBP15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 NFE2L3Q9Y4A8 694 aa15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 COL5A2P05997 1499 aaPredicted RBP15.18■□□□□ 0.02
SLC28A1-201ENST00000286749 POLR2DO15514 142 aaKnown RBP15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 CDK11BP21127 795 aaKnown RBP15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 ARID4AP29374 1257 aaPredicted RBP15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 ADKP55263 362 aaKnown RBP15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 TMCO3Q6UWJ1 677 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 IFNL3Q8IZI9 196 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 SERTAD1Q9UHV2 236 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 FBXO2Q9UK22 296 aaPredicted RBP15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 ASAP1Q9ULH1 1129 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 STRCQ7RTU9 1775 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 ANKRD36CQ5JPF3 1778 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 ZRANB2O95218 330 aaKnown RBP eCLIP15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 MBD4O95243 580 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 IFNAR1P17181 557 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 PLA2G4AP47712 749 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 SAFBQ15424 915 aaKnown RBP eCLIP15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 TOGARAM2Q6ZUX3 1019 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 CADPS2Q86UW7 1296 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 CCDC82Q8N4S0 544 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 HELBQ8NG08 1087 aaPredicted RBP15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 WDR24Q96S15 920 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 NOL10Q9BSC4 688 aaKnown RBP15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 MYH6P13533 1939 aa15.17■□□□□ 0.02
SLC28A1-201ENST00000286749 EFCAB8A8MWE9 144 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 IRS4O14654 1257 aaPredicted RBP15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 GNG11P61952 73 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 ALX1Q15699 326 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 RRP12Q5JTH9 1297 aaKnown RBP15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 SPECC1LQ69YQ0 1117 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 TC2NQ8N9U0 490 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 WASF1Q92558 559 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 ZKSCAN3Q9BRR0 538 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 EPC1Q9H2F5 836 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 ARMT1Q9H993 441 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 ERICH4A6NGS2 130 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 PATL2C9JE40 543 aaKnown RBP15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 UQCRFS1P1P0C7P4 283 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 ZNF18P17022 549 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 PTPREP23469 700 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 CASQ1P31415 396 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 ELOA2Q8IYF1 753 aaPredicted RBP15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 CMTR1Q8N1G2 835 aaKnown RBP15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 MAGEB6Q8N7X4 407 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 SMARCE1Q969G3 411 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 DOCK2Q92608 1830 aa15.16■□□□□ 0.02
SLC28A1-201ENST00000286749 SEC31AO94979 1220 aaKnown RBP15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 NR5A1Q13285 461 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 MORC3Q14149 939 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 TAF3Q5VWG9 929 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 MLKLQ8NB16 471 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 MPHOSPH8Q99549 860 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 STRN4Q9NRL3 753 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 TOMM22Q9NS69 142 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 PCDHB6Q9Y5E3 794 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 TIAM2Q8IVF5 1701 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 ARAP2Q8WZ64 1704 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 STX10O60499 249 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 ATP2B1P20020 1258 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 RTN1Q16799 776 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 AKNAD1Q5T1N1 836 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 NT5DC1Q5TFE4 455 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 TRIM22Q8IYM9 498 aa15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 TRMT112Q9UI30 125 aaKnown RBP15.15■□□□□ 0.02
SLC28A1-201ENST00000286749 STARD3NLO95772 234 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 SARSP49591 514 aaKnown RBP15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 RILPL1Q5EBL4 403 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 MFSD6Q6ZSS7 791 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 SPATA5Q8NB90 893 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 ENOX1Q8TC92 643 aaKnown RBP15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 MED15Q96RN5 788 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 DESI2Q9BSY9 194 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 CARD10Q9BWT7 1032 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 TEX13AQ9BXU3 409 aaPredicted RBP15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 SEC31BQ9NQW1 1179 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 SAMSN1Q9NSI8 373 aaKnown RBP15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 DACH1Q9UI36 760 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 NUP98P52948 1817 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 KAT6BQ8WYB5 2073 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 GOLGA6L9A6NEM1 432 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 PRKAB2O43741 272 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 PUM3Q15397 648 aaKnown RBP15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 PIGBQ92521 554 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 KRT23Q9C075 422 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 FOXP1Q9H334 677 aaPredicted RBP15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 CNNM2Q9H8M5 875 aa15.14■□□□□ 0.01
SLC28A1-201ENST00000286749 GSG1L2A8MUP6 293 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 MAP3K9P80192 1104 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 WTAPQ15007 396 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 USP49Q70CQ1 688 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 RAI14Q9P0K7 980 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 NID2Q14112 1375 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 SNAP23O00161 211 aa15.13■□□□□ 0.01
SLC28A1-201ENST00000286749 ACTN4O43707 911 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms