RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 CCDC183Q5T5S1 534 aa11.87□□□□□ -0.51
SEC24D-201ENST00000280551 RCSD1Q6JBY9 416 aa11.87□□□□□ -0.51
SEC24D-201ENST00000280551 CHST3Q7LGC8 479 aa11.87□□□□□ -0.51
SEC24D-201ENST00000280551 PGBD1Q96JS3 809 aa11.87□□□□□ -0.51
SEC24D-201ENST00000280551 PAPPA2Q9BXP8 1791 aa11.87□□□□□ -0.51
SEC24D-201ENST00000280551 ENAHQ8N8S7 591 aaPredicted RBP11.87□□□□□ -0.51
SEC24D-201ENST00000280551 MIGA1Q8NAN2 632 aa11.87□□□□□ -0.51
SEC24D-201ENST00000280551 SDR42E1Q8WUS8 393 aa11.87□□□□□ -0.51
SEC24D-201ENST00000280551 GZF1Q9H116 711 aaPredicted RBP11.87□□□□□ -0.51
SEC24D-201ENST00000280551 KIF23Q02241 960 aaPredicted RBP11.86□□□□□ -0.51
SEC24D-201ENST00000280551 STK3Q13188 491 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 ENGASEQ8NFI3 743 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 ESR2Q92731 530 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 ZSCAN10Q96SZ4 725 aaPredicted RBP11.86□□□□□ -0.51
SEC24D-201ENST00000280551 ATAD5Q96QE3 1844 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 KDM4AO75164 1064 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 LDHBP07195 334 aaKnown RBP11.86□□□□□ -0.51
SEC24D-201ENST00000280551 ELOA2Q8IYF1 753 aaPredicted RBP11.86□□□□□ -0.51
SEC24D-201ENST00000280551 FBXO41Q8TF61 875 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 A0A1W2PQ27 194 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 A0A1W2PQ64 194 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 A0A1W2PQD8 194 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 ZBTB43O43298 467 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 HDLBPQ00341 1268 aaKnown RBP11.86□□□□□ -0.51
SEC24D-201ENST00000280551 GABPAQ06546 454 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
SEC24D-201ENST00000280551 VPS37DQ86XT2 251 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 SHISA4Q96DD7 197 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 RNF26Q9BY78 433 aaPredicted RBP11.86□□□□□ -0.51
SEC24D-201ENST00000280551 VPS33BQ9H267 617 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 INCENPQ9NQS7 918 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 CFAP45Q9UL16 551 aa11.86□□□□□ -0.51
SEC24D-201ENST00000280551 AP5Z1O43299 807 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 UFL1O94874 794 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 YEATS4O95619 227 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 TDO2P48775 406 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 METAP2P50579 478 aaKnown RBP eCLIP11.85□□□□□ -0.51
SEC24D-201ENST00000280551 IGKV6D-41A0A0C4DH26 115 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 LDHCP07864 332 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 HHIPL2Q6UWX4 724 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 C16orf86Q6ZW13 317 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 CRACR2BQ8N4Y2 399 aaPredicted RBP11.85□□□□□ -0.51
SEC24D-201ENST00000280551 SYAP1Q96A49 352 aaPredicted RBP11.85□□□□□ -0.51
SEC24D-201ENST00000280551 ANKIB1Q9P2G1 1089 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 ZHX1Q9UKY1 873 aaPredicted RBP11.85□□□□□ -0.51
SEC24D-201ENST00000280551 CALM1P0DP23 149 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 CALM2P0DP24 149 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 CALM3P0DP25 149 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 TMEM67Q5HYA8 995 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 CAVIN1Q6NZI2 390 aaKnown RBP11.85□□□□□ -0.51
SEC24D-201ENST00000280551 DGKHQ86XP1 1220 aa11.85□□□□□ -0.51
SEC24D-201ENST00000280551 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.85□□□□□ -0.51
SEC24D-201ENST00000280551 PARP14Q460N5 1801 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 CCDC178Q5BJE1 867 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 TNFRSF25Q93038 417 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 RBM28Q9NW13 759 aaKnown RBP11.84□□□□□ -0.51
SEC24D-201ENST00000280551 TNKSO95271 1327 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 LOC285556D6RIA3 1793 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 SMIM22K7EJ46 135 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 PLCG2P16885 1265 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 CCT2P78371 535 aaKnown RBP11.84□□□□□ -0.51
SEC24D-201ENST00000280551 SNW1Q13573 536 aaKnown RBP11.84□□□□□ -0.51
SEC24D-201ENST00000280551 PKN1Q16512 942 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 ABCF2Q9UG63 623 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 IQSEC3Q9UPP2 1182 aaPredicted RBP11.84□□□□□ -0.51
SEC24D-201ENST00000280551 PRPF3O43395 683 aaKnown RBP11.84□□□□□ -0.51
SEC24D-201ENST00000280551 MMP10P09238 476 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 SMARCA1P28370 1054 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 CC2D2BQ6DHV5 1058 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 ZNF654Q8IZM8 581 aa11.84□□□□□ -0.51
SEC24D-201ENST00000280551 KIF28PB7ZC32 967 aa11.83□□□□□ -0.51
SEC24D-201ENST00000280551 WTAPQ15007 396 aa11.83□□□□□ -0.51
SEC24D-201ENST00000280551 PTPAQ15257 358 aa11.83□□□□□ -0.51
SEC24D-201ENST00000280551 NPY5RQ15761 445 aa11.83□□□□□ -0.51
SEC24D-201ENST00000280551 CERS5Q8N5B7 392 aa11.83□□□□□ -0.51
SEC24D-201ENST00000280551 FANCBQ8NB91 859 aa11.83□□□□□ -0.51
SEC24D-201ENST00000280551 SH3RF3Q8TEJ3 882 aaPredicted RBP11.83□□□□□ -0.51
SEC24D-201ENST00000280551 SLF2Q8IX21 1173 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 IL17RBQ9NRM6 502 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 AATFQ9NY61 560 aaKnown RBP eCLIP11.83□□□□□ -0.52
SEC24D-201ENST00000280551 RBM27Q9P2N5 1060 aaKnown RBP11.83□□□□□ -0.52
SEC24D-201ENST00000280551 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 CNTNAP5Q8WYK1 1306 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 ATRNL1Q5VV63 1379 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 VPS37CA5D8V6 355 aaPredicted RBP11.83□□□□□ -0.52
SEC24D-201ENST00000280551 SART3Q15020 963 aaKnown RBP11.83□□□□□ -0.52
SEC24D-201ENST00000280551 UVSSAQ2YD98 709 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 LINC00301Q8NCQ3 95 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 FOXP1Q9H334 677 aaPredicted RBP11.83□□□□□ -0.52
SEC24D-201ENST00000280551 CCDC196A0A1B0GTZ2 297 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 USP17L12C9JPN9 530 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 USP17L21D6R901 530 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 PPP6R2O75170 966 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 APPP05067 770 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 CLCN1P35523 988 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 SLC16A10Q8TF71 515 aa11.83□□□□□ -0.52
SEC24D-201ENST00000280551 ORC3Q9UBD5 711 aaPredicted RBP11.83□□□□□ -0.52
SEC24D-201ENST00000280551 FLT1P17948 1338 aa11.82□□□□□ -0.52
SEC24D-201ENST00000280551 RBBP6Q7Z6E9 1792 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms