RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 SUPT20HQ8NEM7 779 aa24.04■■□□□ 1.44
LYSMD2-201ENST00000267838 MXD3Q9BW11 206 aa24.04■■□□□ 1.44
LYSMD2-201ENST00000267838 F8W031 263 aaPredicted RBP24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 C21orf2O43822 256 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 PPFIA3O75145 1194 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 RXRAP19793 462 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 CLCN1P35523 988 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 RHBDL3P58872 404 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 MAPKAPK5Q8IW41 473 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 TTF2Q9UNY4 1162 aaKnown RBP24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 CNPY2Q9Y2B0 182 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 TNKSO95271 1327 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 GOLGA8AA7E2F4 631 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 ECE2O60344 883 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 SEC23AQ15436 765 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 ZSCAN10Q96SZ4 725 aaPredicted RBP24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 MYL10Q9BUA6 226 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 NID2Q14112 1375 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 ROBO3Q96MS0 1386 aa24.03■■□□□ 1.44
LYSMD2-201ENST00000267838 DPEP1P16444 411 aa24.02■■□□□ 1.44
LYSMD2-201ENST00000267838 CDC27P30260 824 aa24.02■■□□□ 1.44
LYSMD2-201ENST00000267838 ADD1P35611 737 aaKnown RBP24.02■■□□□ 1.44
LYSMD2-201ENST00000267838 GRIPAP1Q4V328 841 aa24.02■■□□□ 1.44
LYSMD2-201ENST00000267838 IQCA1Q86XH1 822 aa24.02■■□□□ 1.44
LYSMD2-201ENST00000267838 TMEM87AQ8NBN3 555 aa24.02■■□□□ 1.44
LYSMD2-201ENST00000267838 GDPD2Q9HCC8 539 aa24.02■■□□□ 1.44
LYSMD2-201ENST00000267838 DDX60LQ5H9U9 1706 aaKnown RBP24.02■■□□□ 1.44
LYSMD2-201ENST00000267838 CDKL5O76039 1030 aa24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 ZBTB7AO95365 584 aa24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 KCNA3P22001 575 aa24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 DNM1Q05193 864 aaKnown RBP24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 KIAA2012Q0VF49 1180 aa24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 AOC3Q16853 763 aa24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 SLC4A8Q2Y0W8 1093 aa24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 CPLX2Q6PUV4 134 aaKnown RBP24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 CCDC144CPQ8IYA2 1237 aa24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 KCNQ5Q9NR82 932 aa24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 ORC3Q9UBD5 711 aaPredicted RBP24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 FOCADQ5VW36 1801 aa24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 FKBP1AP62942 108 aaKnown RBP24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 STRIP1Q5VSL9 837 aa24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 USP48Q86UV5 1035 aa24.01■■□□□ 1.43
LYSMD2-201ENST00000267838 ZNF646O15015 1829 aaPredicted RBP24■■□□□ 1.43
LYSMD2-201ENST00000267838 SCN9AQ15858 1988 aa24■■□□□ 1.43
LYSMD2-201ENST00000267838 POLR3DP05423 398 aaPredicted RBP24■■□□□ 1.43
LYSMD2-201ENST00000267838 NCLP19338 710 aaKnown RBP24■■□□□ 1.43
LYSMD2-201ENST00000267838 FOSBP53539 338 aa24■■□□□ 1.43
LYSMD2-201ENST00000267838 RCAN1P53805 252 aa24■■□□□ 1.43
LYSMD2-201ENST00000267838 CCDC93Q567U6 631 aa24■■□□□ 1.43
LYSMD2-201ENST00000267838 GAS2L3Q86XJ1 694 aa24■■□□□ 1.43
LYSMD2-201ENST00000267838 ENAHQ8N8S7 591 aaPredicted RBP24■■□□□ 1.43
LYSMD2-201ENST00000267838 FAM217BQ9NTX9 383 aaPredicted RBP24■■□□□ 1.43
LYSMD2-201ENST00000267838 SAP30BPQ9UHR5 308 aaKnown RBP24■■□□□ 1.43
LYSMD2-201ENST00000267838 FLT1P17948 1338 aa24■■□□□ 1.43
LYSMD2-201ENST00000267838 NT5C2P49902 561 aa23.99■■□□□ 1.43
LYSMD2-201ENST00000267838 RESTQ13127 1097 aa23.99■■□□□ 1.43
LYSMD2-201ENST00000267838 ZNF654Q8IZM8 581 aa23.99■■□□□ 1.43
LYSMD2-201ENST00000267838 GPT2Q8TD30 523 aa23.99■■□□□ 1.43
LYSMD2-201ENST00000267838 TRIM44Q96DX7 344 aaPredicted RBP23.99■■□□□ 1.43
LYSMD2-201ENST00000267838 ZSCAN16Q9H4T2 348 aaPredicted RBP23.99■■□□□ 1.43
LYSMD2-201ENST00000267838 NTRK3Q16288 839 aa23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 HHIPL2Q6UWX4 724 aa23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 MYH1P12882 1939 aa23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 SCNN1DP51172 638 aa23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 ZNF445P59923 1031 aa23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 CCDC173Q0VFZ6 552 aa23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 FAM47AQ5JRC9 791 aa23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 DACT2Q5SW24 774 aa23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 IFIT1BQ5T764 474 aaKnown RBP23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 RTKN2Q8IZC4 609 aa23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 ANP32BQ92688 251 aaKnown RBP23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 DYNLL2Q96FJ2 89 aa23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 ADAMTSL1Q8N6G6 1762 aa23.98■■□□□ 1.43
LYSMD2-201ENST00000267838 USP17L3A6NCW0 530 aa23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 USP17L4A6NCW7 530 aa23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 PPIP5K2O43314 1243 aa23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 FIBPO43427 364 aa23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 MBD3O95983 291 aa23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 PLCD1P51178 756 aa23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 RTN1Q16799 776 aa23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 CSPP1Q1MSJ5 1256 aa23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 ILDR2Q71H61 639 aa23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 USP17L1Q7RTZ2 530 aa23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 TEKT1Q969V4 418 aa23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 MTFR1LQ9H019 292 aa23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 ATF5Q9Y2D1 282 aaPredicted RBP23.97■■□□□ 1.43
LYSMD2-201ENST00000267838 TSPY2A6NKD2 308 aa23.96■■□□□ 1.43
LYSMD2-201ENST00000267838 POLD1P28340 1107 aa23.96■■□□□ 1.43
LYSMD2-201ENST00000267838 KRT85P78386 507 aa23.96■■□□□ 1.43
LYSMD2-201ENST00000267838 FAM173BQ6P4H8 233 aa23.96■■□□□ 1.43
LYSMD2-201ENST00000267838 C8orf76Q96K31 380 aa23.96■■□□□ 1.43
LYSMD2-201ENST00000267838 PSMD1Q99460 953 aa23.96■■□□□ 1.43
LYSMD2-201ENST00000267838 MKNK2Q9HBH9 465 aa23.96■■□□□ 1.43
LYSMD2-201ENST00000267838 CCDC196A0A1B0GTZ2 297 aa23.95■■□□□ 1.42
LYSMD2-201ENST00000267838 IARSP41252 1262 aaKnown RBP23.95■■□□□ 1.42
LYSMD2-201ENST00000267838 TGFB2P61812 414 aa23.95■■□□□ 1.42
LYSMD2-201ENST00000267838 GUCY1B3Q02153 619 aa23.95■■□□□ 1.42
LYSMD2-201ENST00000267838 FANCBQ8NB91 859 aa23.95■■□□□ 1.42
LYSMD2-201ENST00000267838 NUP133Q8WUM0 1156 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms