RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CENPHQ9H3R5 247 aa9.97□□□□□ -0.81
VAPB-201ENST00000265619 MROH7-TTC4A0A0A0MT08 1334 aa9.97□□□□□ -0.81
VAPB-201ENST00000265619 H0YHG0 523 aa9.97□□□□□ -0.81
VAPB-201ENST00000265619 SSBP05455 408 aaKnown RBP eCLIP9.97□□□□□ -0.81
VAPB-201ENST00000265619 AARSP49588 968 aaKnown RBP eCLIP9.97□□□□□ -0.81
VAPB-201ENST00000265619 GNGT1P63211 74 aa9.97□□□□□ -0.81
VAPB-201ENST00000265619 SARNPP82979 210 aaKnown RBP9.97□□□□□ -0.81
VAPB-201ENST00000265619 IQCA1Q86XH1 822 aa9.97□□□□□ -0.81
VAPB-201ENST00000265619 SSH3Q8TE77 659 aa9.97□□□□□ -0.81
VAPB-201ENST00000265619 TATDN2Q93075 761 aa9.97□□□□□ -0.81
VAPB-201ENST00000265619 IL2RBP14784 551 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 CDC25CP30307 473 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 AKAP17AQ02040 695 aaKnown RBP9.96□□□□□ -0.81
VAPB-201ENST00000265619 ZNF790Q6PG37 636 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 PARD3BQ8TEW8 1205 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 TEX13AQ9BXU3 409 aaPredicted RBP9.96□□□□□ -0.81
VAPB-201ENST00000265619 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.96□□□□□ -0.81
VAPB-201ENST00000265619 ZBTB12Q9Y330 459 aaPredicted RBP9.96□□□□□ -0.81
VAPB-201ENST00000265619 NFAT5O94916 1531 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 SLC3A2P08195 630 aaKnown RBP9.96□□□□□ -0.81
VAPB-201ENST00000265619 CCT2P78371 535 aaKnown RBP9.96□□□□□ -0.81
VAPB-201ENST00000265619 E2F5Q15329 346 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 KIF4BQ2VIQ3 1234 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 Q6ZUG5 572 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 FCHSD1Q86WN1 690 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 ZBTB3Q9H5J0 574 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 KIF9Q9HAQ2 790 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 COL15A1P39059 1388 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 NWD1Q149M9 1564 aa9.96□□□□□ -0.81
VAPB-201ENST00000265619 PPP1R12BO60237 982 aaPredicted RBP9.96□□□□□ -0.82
VAPB-201ENST00000265619 PFKFB2O60825 505 aa9.96□□□□□ -0.82
VAPB-201ENST00000265619 RPSAP08865 295 aaKnown RBP9.96□□□□□ -0.82
VAPB-201ENST00000265619 BMP6P22004 513 aa9.96□□□□□ -0.82
VAPB-201ENST00000265619 NF2P35240 595 aa9.96□□□□□ -0.82
VAPB-201ENST00000265619 PNOCQ13519 176 aa9.96□□□□□ -0.82
VAPB-201ENST00000265619 CEP57Q86XR8 500 aa9.96□□□□□ -0.82
VAPB-201ENST00000265619 EDC3Q96F86 508 aaKnown RBP9.96□□□□□ -0.82
VAPB-201ENST00000265619 MRPS25P82663 173 aaKnown RBP9.95□□□□□ -0.82
VAPB-201ENST00000265619 GRIK3Q13003 919 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 FKBP15Q5T1M5 1219 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 COPS6Q7L5N1 327 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 ACRBPQ8NEB7 543 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 XAGE3Q8WTP9 111 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 NBPF3Q9H094 633 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 SLC52A2Q9HAB3 445 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 HDAC6Q9UBN7 1215 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 MEGF6O75095 1541 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 EIF3HO15372 352 aaKnown RBP eCLIP9.95□□□□□ -0.82
VAPB-201ENST00000265619 POLR3DP05423 398 aaPredicted RBP9.95□□□□□ -0.82
VAPB-201ENST00000265619 KCNQ4P56696 695 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 PDCLQ13371 301 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 WLSQ5T9L3 541 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 NSUN7Q8NE18 718 aaKnown RBP9.95□□□□□ -0.82
VAPB-201ENST00000265619 CPLX3Q8WVH0 158 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 RRP36Q96EU6 259 aaKnown RBP9.95□□□□□ -0.82
VAPB-201ENST00000265619 NGLY1Q96IV0 654 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 MYD88Q99836 296 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 TRIM6Q9C030 488 aaPredicted RBP9.95□□□□□ -0.82
VAPB-201ENST00000265619 KLC4Q9NSK0 619 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 A0A0G2JLW4 131 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 CHUKO15111 745 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 FOXN1O15353 648 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 USP8P40818 1118 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 FOXP4Q8IVH2 680 aaPredicted RBP9.95□□□□□ -0.82
VAPB-201ENST00000265619 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.95□□□□□ -0.82
VAPB-201ENST00000265619 TFR2Q9UP52 801 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 ADGRG1Q9Y653 693 aa9.95□□□□□ -0.82
VAPB-201ENST00000265619 SRGAP2O75044 1071 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 PEX19P40855 299 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 MED1Q15648 1581 aaPredicted RBP9.94□□□□□ -0.82
VAPB-201ENST00000265619 ACCSLQ4AC99 568 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 TRMT44Q8IYL2 757 aaKnown RBP9.94□□□□□ -0.82
VAPB-201ENST00000265619 CEP112Q8N8E3 955 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 CAPS2Q9BXY5 557 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 TRIM10Q9UDY6 481 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 PA2G4Q9UQ80 394 aaKnown RBP9.94□□□□□ -0.82
VAPB-201ENST00000265619 OPLAHO14841 1288 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 STX10O60499 249 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 CAND2O75155 1236 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 CLNS1AP54105 237 aaKnown RBP9.94□□□□□ -0.82
VAPB-201ENST00000265619 FAM76AQ8TAV0 307 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 DBF4Q9UBU7 674 aaPredicted RBP9.94□□□□□ -0.82
VAPB-201ENST00000265619 NDUFB9Q9Y6M9 179 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 WDR17Q8IZU2 1322 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 GOLGA6CA6NDK9 693 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 ENC1O14682 589 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 TEX33O43247 280 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 FSBPO95073 299 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 GOLGA6DP0CG33 693 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 STIM1Q13586 685 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 POLA2Q14181 598 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 TLDC1Q6P9B6 456 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 POTEDQ86YR6 584 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 SH2D3CQ8N5H7 860 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 KLHDC4Q8TBB5 520 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 GOLGA6AQ9NYA3 693 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 TLR7Q9NYK1 1049 aaKnown RBP9.94□□□□□ -0.82
VAPB-201ENST00000265619 TMOD3Q9NYL9 352 aa9.94□□□□□ -0.82
VAPB-201ENST00000265619 PTPDC1A2A3K4 754 aa9.93□□□□□ -0.82
VAPB-201ENST00000265619 RASSF9O75901 435 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms