RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 ATG3Q9NT62 314 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 FAM169AQ9Y6X4 670 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 CD109Q6YHK3 1445 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 CITO14578 2027 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 PPP1R7Q15435 360 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 PLEKHA4Q9H4M7 779 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 KIF9Q9HAQ2 790 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 ZPR1O75312 459 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 HAND2P61296 217 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 CLUL1Q15846 466 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 UBE3BQ7Z3V4 1068 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 TCP11Q8WWU5 503 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 KDM5DQ9BY66 1539 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 GOLGA8KD6RF30 607 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 BICDL1Q6ZP65 573 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 LRRC45Q96CN5 670 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 IQCDQ96DY2 449 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 MARCKSP29966 332 aaPredicted RBP6.35□□□□□ -1.39
VCAN-201ENST00000265077 IL15P40933 162 aaPredicted RBP6.35□□□□□ -1.39
VCAN-201ENST00000265077 CORO7P57737 925 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 COG7P83436 770 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 CFAP58Q5T655 872 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 HHATQ5VTY9 493 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 TCERG1LQ5VWI1 586 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 WAPLQ7Z5K2 1190 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 RAB3IL1Q8TBN0 382 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 RAB3IPQ96QF0 476 aaPredicted RBP6.35□□□□□ -1.39
VCAN-201ENST00000265077 NOP53Q9NZM5 478 aaKnown RBP6.35□□□□□ -1.39
VCAN-201ENST00000265077 TTF2Q9UNY4 1162 aaKnown RBP6.35□□□□□ -1.39
VCAN-201ENST00000265077 FAN1Q9Y2M0 1017 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 ADGRF5Q8IZF2 1346 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 RASSF10A6NK89 507 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 KRT13P13646 458 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 ALDH3A1P30838 453 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 IFT88Q13099 833 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 ANKIB1Q9P2G1 1089 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 E7EVH7 732 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 HPDP32754 393 aaPredicted RBP6.35□□□□□ -1.39
VCAN-201ENST00000265077 GSTO1P78417 241 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 KSR2Q6VAB6 950 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 LARP6Q9BRS8 491 aaKnown RBP6.35□□□□□ -1.39
VCAN-201ENST00000265077 FAM83GA6ND36 823 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 TROVE2P10155 538 aaKnown RBP eCLIP6.35□□□□□ -1.39
VCAN-201ENST00000265077 KRT2P35908 639 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 GRAMD4Q6IC98 578 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 IFT20Q8IY31 132 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 CCDC170Q8IYT3 715 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 CCDC151A5D8V7 595 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 MYL5Q02045 173 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 SEPT2Q15019 361 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 IGSF22Q8N9C0 903 aa6.35□□□□□ -1.39
VCAN-201ENST00000265077 BICC1Q9H694 974 aaKnown RBP6.35□□□□□ -1.39
VCAN-201ENST00000265077 SEC31AO94979 1220 aaKnown RBP6.34□□□□□ -1.39
VCAN-201ENST00000265077 TPP2P29144 1249 aaPredicted RBP6.34□□□□□ -1.39
VCAN-201ENST00000265077 AFMP43652 599 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 LONRF2Q1L5Z9 754 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 GKAP1Q5VSY0 366 aaPredicted RBP6.34□□□□□ -1.39
VCAN-201ENST00000265077 CCDC144CPQ8IYA2 1237 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 RPGRIP1Q96KN7 1286 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 CAPZA3Q96KX2 299 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 DYTNA2CJ06 578 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 ZBTB10Q96DT7 871 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 UBXN1Q04323 297 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 LZTFL1Q9NQ48 299 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 NAPGQ99747 312 aaPredicted RBP6.34□□□□□ -1.39
VCAN-201ENST00000265077 NUP58Q9BVL2 599 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 CRNKL1Q9BZJ0 848 aaKnown RBP6.34□□□□□ -1.39
VCAN-201ENST00000265077 WDR62O43379 1518 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 SPECC1L-ADORA2AF8WAN1 911 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 CHRM1P11229 460 aaPredicted RBP6.34□□□□□ -1.39
VCAN-201ENST00000265077 GNA11P29992 359 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 VWA3BQ502W6 1294 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 RILPL1Q5EBL4 403 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 CYP26C1Q6V0L0 522 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 UTP14AQ9BVJ6 771 aaKnown RBP6.34□□□□□ -1.39
VCAN-201ENST00000265077 TRMT112Q9UI30 125 aaKnown RBP6.34□□□□□ -1.39
VCAN-201ENST00000265077 DAAM1Q9Y4D1 1078 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 CENPKQ9BS16 269 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 POLKQ9UBT6 870 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 HDAC9Q9UKV0 1011 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 ATP2A2P16615 1042 aaKnown RBP6.34□□□□□ -1.39
VCAN-201ENST00000265077 B4GALNT2Q8NHY0 566 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 CCDC110Q8TBZ0 833 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 EMILIN1Q9Y6C2 1016 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 SYNMO15061 1565 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 CUTAO60888 179 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 VAMP4O75379 141 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 CIB2O75838 187 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 CCDC122Q5T0U0 273 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 ZNF710Q8N1W2 664 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 FRMD4BQ9Y2L6 1034 aa6.34□□□□□ -1.39
VCAN-201ENST00000265077 RPL13P26373 211 aaKnown RBP6.34□□□□□ -1.4
VCAN-201ENST00000265077 CHMLP26374 656 aa6.34□□□□□ -1.4
VCAN-201ENST00000265077 INTS8Q75QN2 995 aaKnown RBP6.34□□□□□ -1.4
VCAN-201ENST00000265077 HAUS1Q96CS2 278 aa6.34□□□□□ -1.4
VCAN-201ENST00000265077 ABCA5Q8WWZ7 1642 aa6.34□□□□□ -1.4
VCAN-201ENST00000265077 ECM2O94769 699 aaPredicted RBP6.34□□□□□ -1.4
VCAN-201ENST00000265077 SUGP1Q8IWZ8 645 aaKnown RBP6.34□□□□□ -1.4
VCAN-201ENST00000265077 SYNCQ9H7C4 482 aa6.34□□□□□ -1.4
VCAN-201ENST00000265077 BABAM1Q9NWV8 329 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms