RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 IFNL3Q8IZI9 196 aa22.57■■□□□ 1.2
CSPG5-201ENST00000264723 IL6STP40189 918 aaPredicted RBP22.56■■□□□ 1.2
CSPG5-201ENST00000264723 EVCP57679 992 aa22.56■■□□□ 1.2
CSPG5-201ENST00000264723 KIF23Q02241 960 aaPredicted RBP22.56■■□□□ 1.2
CSPG5-201ENST00000264723 NR5A1Q13285 461 aa22.56■■□□□ 1.2
CSPG5-201ENST00000264723 APOA5Q6Q788 366 aa22.56■■□□□ 1.2
CSPG5-201ENST00000264723 KIAA1328Q86T90 577 aa22.56■■□□□ 1.2
CSPG5-201ENST00000264723 VPS16Q9H269 839 aa22.56■■□□□ 1.2
CSPG5-201ENST00000264723 SPTLC3Q9NUV7 552 aa22.56■■□□□ 1.2
CSPG5-201ENST00000264723 ZNHIT6Q9NWK9 470 aaKnown RBP22.56■■□□□ 1.2
CSPG5-201ENST00000264723 CTDNEP1O95476 244 aa22.56■■□□□ 1.2
CSPG5-201ENST00000264723 FOXO4P98177 505 aa22.56■■□□□ 1.2
CSPG5-201ENST00000264723 NCBP1Q09161 790 aaKnown RBP22.56■■□□□ 1.2
CSPG5-201ENST00000264723 AKNAD1Q5T1N1 836 aa22.56■■□□□ 1.2
CSPG5-201ENST00000264723 TMOD2Q9NZR1 351 aa22.56■■□□□ 1.2
CSPG5-201ENST00000264723 SUSD4Q5VX71 490 aa22.55■■□□□ 1.2
CSPG5-201ENST00000264723 SPATA31D1Q6ZQQ2 1576 aa22.55■■□□□ 1.2
CSPG5-201ENST00000264723 FUCA2Q9BTY2 467 aa22.55■■□□□ 1.2
CSPG5-201ENST00000264723 PHACTR2O75167 634 aa22.55■■□□□ 1.2
CSPG5-201ENST00000264723 CMA1P23946 247 aa22.55■■□□□ 1.2
CSPG5-201ENST00000264723 ZNF804AQ7Z570 1209 aa22.55■■□□□ 1.2
CSPG5-201ENST00000264723 DIP2AQ14689 1571 aa22.55■■□□□ 1.2
CSPG5-201ENST00000264723 JAKMIP3Q5VZ66 844 aa22.55■■□□□ 1.2
CSPG5-201ENST00000264723 PLA2G4DQ86XP0 818 aa22.55■■□□□ 1.2
CSPG5-201ENST00000264723 CEP89Q96ST8 783 aa22.55■■□□□ 1.2
CSPG5-201ENST00000264723 FEZ1Q99689 392 aa22.55■■□□□ 1.2
CSPG5-201ENST00000264723 DEF6Q9H4E7 631 aa22.55■■□□□ 1.2
CSPG5-201ENST00000264723 MCAMP43121 646 aa22.54■■□□□ 1.2
CSPG5-201ENST00000264723 SLF2Q8IX21 1173 aa22.54■■□□□ 1.2
CSPG5-201ENST00000264723 PIH1D3Q9NQM4 214 aaKnown RBP22.54■■□□□ 1.2
CSPG5-201ENST00000264723 BMP2KQ9NSY1 1161 aaPredicted RBP22.54■■□□□ 1.2
CSPG5-201ENST00000264723 ERCC3P19447 782 aa22.54■■□□□ 1.2
CSPG5-201ENST00000264723 BLZF1Q9H2G9 400 aa22.54■■□□□ 1.2
CSPG5-201ENST00000264723 PATL2C9JE40 543 aaKnown RBP22.54■■□□□ 1.2
CSPG5-201ENST00000264723 RHOXF2BP0C7M4 288 aa22.54■■□□□ 1.2
CSPG5-201ENST00000264723 RHOXF2Q9BQY4 288 aa22.54■■□□□ 1.2
CSPG5-201ENST00000264723 ANKRD2Q9GZV1 360 aa22.54■■□□□ 1.2
CSPG5-201ENST00000264723 RFX5P48382 616 aaPredicted RBP22.53■■□□□ 1.2
CSPG5-201ENST00000264723 ZNF569Q5MCW4 686 aa22.53■■□□□ 1.2
CSPG5-201ENST00000264723 AXDND1Q5T1B0 1012 aaPredicted RBP22.53■■□□□ 1.2
CSPG5-201ENST00000264723 TCP11L1Q9NUJ3 509 aa22.53■■□□□ 1.2
CSPG5-201ENST00000264723 MED23Q9ULK4 1368 aa22.53■■□□□ 1.2
CSPG5-201ENST00000264723 KIF28PB7ZC32 967 aa22.52■■□□□ 1.2
CSPG5-201ENST00000264723 POSTNQ15063 836 aa22.52■■□□□ 1.2
CSPG5-201ENST00000264723 SMYD4Q8IYR2 804 aaPredicted RBP22.52■■□□□ 1.2
CSPG5-201ENST00000264723 ZNF710Q8N1W2 664 aa22.52■■□□□ 1.2
CSPG5-201ENST00000264723 CIAO1O76071 339 aa22.52■■□□□ 1.2
CSPG5-201ENST00000264723 SLC39A14Q15043 492 aa22.52■■□□□ 1.2
CSPG5-201ENST00000264723 CCDC70Q6NSX1 233 aa22.52■■□□□ 1.2
CSPG5-201ENST00000264723 ZSWIM5Q9P217 1185 aa22.52■■□□□ 1.2
CSPG5-201ENST00000264723 NAPAP54920 295 aa22.52■■□□□ 1.2
CSPG5-201ENST00000264723 GSTO1P78417 241 aa22.52■■□□□ 1.2
CSPG5-201ENST00000264723 NOM1Q5C9Z4 860 aaKnown RBP22.52■■□□□ 1.2
CSPG5-201ENST00000264723 MAPKAPK5Q8IW41 473 aa22.52■■□□□ 1.2
CSPG5-201ENST00000264723 REREQ9P2R6 1566 aa22.52■■□□□ 1.2
CSPG5-201ENST00000264723 KCNQ2O43526 872 aa22.52■■□□□ 1.19
CSPG5-201ENST00000264723 CUTAO60888 179 aa22.52■■□□□ 1.19
CSPG5-201ENST00000264723 SMARCC2Q8TAQ2 1214 aa22.52■■□□□ 1.19
CSPG5-201ENST00000264723 SRP68Q9UHB9 627 aaKnown RBP22.52■■□□□ 1.19
CSPG5-201ENST00000264723 TBC1D10CQ8IV04 446 aa22.51■■□□□ 1.19
CSPG5-201ENST00000264723 TEX11Q8IYF3 940 aa22.51■■□□□ 1.19
CSPG5-201ENST00000264723 DRC1Q96MC2 740 aa22.51■■□□□ 1.19
CSPG5-201ENST00000264723 CASP1P29466 404 aa22.51■■□□□ 1.19
CSPG5-201ENST00000264723 LMAN1P49257 510 aa22.51■■□□□ 1.19
CSPG5-201ENST00000264723 IQCB1Q15051 598 aa22.51■■□□□ 1.19
CSPG5-201ENST00000264723 CYB5R4Q7L1T6 521 aa22.51■■□□□ 1.19
CSPG5-201ENST00000264723 FMR1NBQ8N0W7 255 aaPredicted RBP22.51■■□□□ 1.19
CSPG5-201ENST00000264723 IGSF22Q8N9C0 903 aa22.51■■□□□ 1.19
CSPG5-201ENST00000264723 PPP1R13BQ96KQ4 1090 aa22.51■■□□□ 1.19
CSPG5-201ENST00000264723 UBA5Q9GZZ9 404 aa22.51■■□□□ 1.19
CSPG5-201ENST00000264723 UIMC1Q96RL1 719 aa22.51■■□□□ 1.19
CSPG5-201ENST00000264723 GPR108Q9NPR9 543 aa22.51■■□□□ 1.19
CSPG5-201ENST00000264723 UBE2Q2LH0YL09 131 aa22.5■■□□□ 1.19
CSPG5-201ENST00000264723 MATR3P43243 847 aaKnown RBP eCLIP22.5■■□□□ 1.19
CSPG5-201ENST00000264723 NOSTRINQ8IVI9 506 aa22.5■■□□□ 1.19
CSPG5-201ENST00000264723 ARFGAP3Q9NP61 516 aa22.5■■□□□ 1.19
CSPG5-201ENST00000264723 VIRMAQ69YN4 1812 aaKnown RBP22.5■■□□□ 1.19
CSPG5-201ENST00000264723 ERFEQ4G0M1 354 aa22.5■■□□□ 1.19
CSPG5-201ENST00000264723 PIK3AP1Q6ZUJ8 805 aa22.5■■□□□ 1.19
CSPG5-201ENST00000264723 FOXN1O15353 648 aa22.5■■□□□ 1.19
CSPG5-201ENST00000264723 SENP2Q9HC62 589 aa22.5■■□□□ 1.19
CSPG5-201ENST00000264723 NCAPD2Q15021 1401 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 CYP2D7A0A087X1C5 515 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 KRT2P35908 639 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 RILPL1Q5EBL4 403 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 GTPBP4Q9BZE4 634 aaKnown RBP22.49■■□□□ 1.19
CSPG5-201ENST00000264723 POLR3EQ9NVU0 708 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 IMPACTQ9P2X3 320 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 GUCA1BQ9UMX6 200 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 A0A1W2PQ27 194 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 A0A1W2PQ64 194 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 A0A1W2PQD8 194 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 TMEM232C9JQI7 657 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 CCDC175P0C221 793 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 FDPSP14324 419 aaKnown RBP22.49■■□□□ 1.19
CSPG5-201ENST00000264723 PPARAQ07869 468 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 TSGA10IPQ3SY00 556 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 KANK3Q6NY19 840 aa22.49■■□□□ 1.19
CSPG5-201ENST00000264723 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.49■■□□□ 1.19
CSPG5-201ENST00000264723 TNS3Q68CZ2 1445 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms