RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 PLXNA1Q9UIW2 1896 aa18.38■□□□□ 0.53
RABEPK-201ENST00000259460 FAM86C2PA6NEL3 165 aa18.38■□□□□ 0.53
RABEPK-201ENST00000259460 EPHB4P54760 987 aa18.38■□□□□ 0.53
RABEPK-201ENST00000259460 CCDC30Q5VVM6 783 aa18.38■□□□□ 0.53
RABEPK-201ENST00000259460 CDC42EP5Q6NZY7 148 aa18.38■□□□□ 0.53
RABEPK-201ENST00000259460 SH3RF1Q7Z6J0 888 aa18.38■□□□□ 0.53
RABEPK-201ENST00000259460 ASCC2Q9H1I8 757 aaPredicted RBP18.38■□□□□ 0.53
RABEPK-201ENST00000259460 MORF4L1Q9UBU8 362 aa18.38■□□□□ 0.53
RABEPK-201ENST00000259460 ATAD5Q96QE3 1844 aa18.37■□□□□ 0.53
RABEPK-201ENST00000259460 CHD9Q3L8U1 2897 aa18.37■□□□□ 0.53
RABEPK-201ENST00000259460 TRIM43BA6NCK2 446 aa18.37■□□□□ 0.53
RABEPK-201ENST00000259460 BMP1P13497 986 aa18.37■□□□□ 0.53
RABEPK-201ENST00000259460 PABPC4Q13310 644 aaKnown RBP eCLIP18.37■□□□□ 0.536e-11■■■□□ 18.3
RABEPK-201ENST00000259460 ZFPM1Q8IX07 1006 aa18.37■□□□□ 0.53
RABEPK-201ENST00000259460 TRIM43Q96BQ3 446 aaPredicted RBP18.37■□□□□ 0.53
RABEPK-201ENST00000259460 APBA2Q99767 749 aa18.37■□□□□ 0.53
RABEPK-201ENST00000259460 MYH16Q9H6N6 1097 aa18.37■□□□□ 0.53
RABEPK-201ENST00000259460 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
RABEPK-201ENST00000259460 DDX20Q9UHI6 824 aaKnown RBP18.37■□□□□ 0.53
RABEPK-201ENST00000259460 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.36■□□□□ 0.53
RABEPK-201ENST00000259460 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.36■□□□□ 0.53
RABEPK-201ENST00000259460 IGFBP4P22692 258 aa18.36■□□□□ 0.53
RABEPK-201ENST00000259460 RGS2P41220 211 aa18.36■□□□□ 0.53
RABEPK-201ENST00000259460 LPAR1Q92633 364 aa18.36■□□□□ 0.53
RABEPK-201ENST00000259460 CXXC1Q9P0U4 656 aaPredicted RBP18.36■□□□□ 0.53
RABEPK-201ENST00000259460 DAGLAQ9Y4D2 1042 aa18.36■□□□□ 0.53
RABEPK-201ENST00000259460 PEX10O60683 326 aa18.35■□□□□ 0.53
RABEPK-201ENST00000259460 SLURP2P0DP57 97 aa18.35■□□□□ 0.53
RABEPK-201ENST00000259460 FOXO4P98177 505 aa18.35■□□□□ 0.53
RABEPK-201ENST00000259460 ADGRE1Q14246 886 aa18.35■□□□□ 0.53
RABEPK-201ENST00000259460 SLC39A5Q6ZMH5 540 aa18.35■□□□□ 0.53
RABEPK-201ENST00000259460 C11orf16Q9NQ32 467 aa18.35■□□□□ 0.53
RABEPK-201ENST00000259460 LRRC37A2A6NM11 1700 aa18.34■□□□□ 0.53
RABEPK-201ENST00000259460 CNGA1P29973 690 aa18.34■□□□□ 0.53
RABEPK-201ENST00000259460 KCNQ1P51787 676 aa18.34■□□□□ 0.53
RABEPK-201ENST00000259460 TFF2Q03403 129 aa18.34■□□□□ 0.53
RABEPK-201ENST00000259460 CCDC57Q2TAC2 916 aa18.34■□□□□ 0.53
RABEPK-201ENST00000259460 GJC2Q5T442 439 aaPredicted RBP18.34■□□□□ 0.53
RABEPK-201ENST00000259460 FBXO33Q7Z6M2 555 aa18.34■□□□□ 0.53
RABEPK-201ENST00000259460 C8orf58Q8NAV2 365 aa18.34■□□□□ 0.53
RABEPK-201ENST00000259460 USP6NLQ92738 828 aa18.34■□□□□ 0.53
RABEPK-201ENST00000259460 TSPYL2Q9H2G4 693 aaPredicted RBP18.34■□□□□ 0.53
RABEPK-201ENST00000259460 SUGT1Q9Y2Z0 365 aa18.34■□□□□ 0.53
RABEPK-201ENST00000259460 CTNND1O60716 968 aaKnown RBP18.33■□□□□ 0.53
RABEPK-201ENST00000259460 ITGB8P26012 769 aa18.33■□□□□ 0.53
RABEPK-201ENST00000259460 HMGCS2P54868 508 aa18.33■□□□□ 0.53
RABEPK-201ENST00000259460 MSCO60682 206 aa18.32■□□□□ 0.52
RABEPK-201ENST00000259460 GPR37L1O60883 481 aa18.32■□□□□ 0.52
RABEPK-201ENST00000259460 SNX17Q15036 470 aa18.32■□□□□ 0.52
RABEPK-201ENST00000259460 DIXDC1Q155Q3 683 aa18.32■□□□□ 0.52
RABEPK-201ENST00000259460 LMBR1LQ6UX01 489 aa18.32■□□□□ 0.52
RABEPK-201ENST00000259460 MYO9BQ13459 2157 aa18.32■□□□□ 0.52
RABEPK-201ENST00000259460 KBTBD13C9JR72 458 aa18.31■□□□□ 0.52
RABEPK-201ENST00000259460 ZNF853P0CG23 659 aa18.31■□□□□ 0.52
RABEPK-201ENST00000259460 MAPK4P31152 587 aa18.31■□□□□ 0.52
RABEPK-201ENST00000259460 PBX2P40425 430 aa18.31■□□□□ 0.52
RABEPK-201ENST00000259460 IRX3P78415 501 aaPredicted RBP18.31■□□□□ 0.52
RABEPK-201ENST00000259460 SPP2Q13103 211 aa18.31■□□□□ 0.52
RABEPK-201ENST00000259460 WDR43Q15061 677 aaKnown RBP eCLIP18.31■□□□□ 0.52
RABEPK-201ENST00000259460 CAVIN4Q5BKX8 364 aa18.31■□□□□ 0.52
RABEPK-201ENST00000259460 MFSD14CQ5VZR4 134 aa18.31■□□□□ 0.52
RABEPK-201ENST00000259460 GPR142Q7Z601 462 aa18.31■□□□□ 0.52
RABEPK-201ENST00000259460 ZSCAN29Q8IWY8 852 aaPredicted RBP18.31■□□□□ 0.52
RABEPK-201ENST00000259460 CCAR1Q8IX12 1150 aaKnown RBP18.31■□□□□ 0.52
RABEPK-201ENST00000259460 TXNRD2Q9NNW7 524 aa18.31■□□□□ 0.52
RABEPK-201ENST00000259460 USP40Q9NVE5 1235 aa18.31■□□□□ 0.52
RABEPK-201ENST00000259460 RGS3P49796 1198 aa18.3■□□□□ 0.52
RABEPK-201ENST00000259460 FPGSQ05932 587 aa18.3■□□□□ 0.52
RABEPK-201ENST00000259460 AAK1Q2M2I8 961 aa18.3■□□□□ 0.52
RABEPK-201ENST00000259460 MORN1Q5T089 497 aa18.3■□□□□ 0.52
RABEPK-201ENST00000259460 CCDC129Q6ZRS4 1044 aa18.3■□□□□ 0.52
RABEPK-201ENST00000259460 G2E3Q7L622 706 aa18.3■□□□□ 0.52
RABEPK-201ENST00000259460 MICALL1Q8N3F8 863 aa18.3■□□□□ 0.52
RABEPK-201ENST00000259460 GPRC5AQ8NFJ5 357 aa18.3■□□□□ 0.52
RABEPK-201ENST00000259460 PBX4Q9BYU1 374 aa18.3■□□□□ 0.52
RABEPK-201ENST00000259460 UTYO14607 1347 aa18.3■□□□□ 0.52
RABEPK-201ENST00000259460 SH3BP5LQ7L8J4 393 aa18.29■□□□□ 0.52
RABEPK-201ENST00000259460 STK31Q9BXU1 1019 aa18.29■□□□□ 0.52
RABEPK-201ENST00000259460 CHMP4AQ9BY43 222 aa18.29■□□□□ 0.52
RABEPK-201ENST00000259460 PUS3Q9BZE2 481 aaKnown RBP18.29■□□□□ 0.52
RABEPK-201ENST00000259460 PORCNQ9H237 461 aa18.29■□□□□ 0.52
RABEPK-201ENST00000259460 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
RABEPK-201ENST00000259460 FLRT1Q9NZU1 646 aa18.29■□□□□ 0.52
RABEPK-201ENST00000259460 CHD7Q9P2D1 2997 aa18.29■□□□□ 0.52
RABEPK-201ENST00000259460 MYCNP04198 464 aaPredicted RBP18.28■□□□□ 0.52
RABEPK-201ENST00000259460 EPHA10Q5JZY3 1008 aa18.28■□□□□ 0.52
RABEPK-201ENST00000259460 PLEKHH3Q7Z736 793 aa18.28■□□□□ 0.52
RABEPK-201ENST00000259460 ZNF280CQ8ND82 737 aa18.28■□□□□ 0.52
RABEPK-201ENST00000259460 LINS1Q8NG48 757 aa18.28■□□□□ 0.52
RABEPK-201ENST00000259460 KHSRPQ92945 711 aaKnown RBP eCLIP18.28■□□□□ 0.52
RABEPK-201ENST00000259460 IFT57Q9NWB7 429 aa18.28■□□□□ 0.52
RABEPK-201ENST00000259460 GBF1Q92538 1859 aa18.28■□□□□ 0.52
RABEPK-201ENST00000259460 RFX7Q2KHR2 1363 aa18.27■□□□□ 0.52
RABEPK-201ENST00000259460 GRXCR1A8MXD5 290 aa18.27■□□□□ 0.52
RABEPK-201ENST00000259460 CLTBP09497 229 aa18.27■□□□□ 0.52
RABEPK-201ENST00000259460 RAG1P15918 1043 aa18.27■□□□□ 0.52
RABEPK-201ENST00000259460 TLE2Q04725 743 aa18.27■□□□□ 0.52
RABEPK-201ENST00000259460 ARRDC4Q8NCT1 418 aa18.27■□□□□ 0.52
RABEPK-201ENST00000259460 DDTLA6NHG4 134 aaPredicted RBP18.26■□□□□ 0.51
RABEPK-201ENST00000259460 ENTPD3O75355 529 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms