RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 GGT6Q6P531 493 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 C8orf58Q8NAV2 365 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 AMOTQ4VCS5 1084 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 CNOT10Q9H9A5 744 aaKnown RBP14.34□□□□□ -0.11
VAMP4-201ENST00000236192 SUN1O94901 812 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 SF3A3Q12874 501 aaKnown RBP eCLIP14.34□□□□□ -0.11
VAMP4-201ENST00000236192 FOXR1Q6PIV2 292 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 TSPYL6Q8N831 410 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 B4GALNT2Q8NHY0 566 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 DDX12PQ92771 950 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 BPIFA3Q9BQP9 254 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 ZSWIM6Q9HCJ5 1215 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 KCNH3Q9ULD8 1083 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 HYOU1Q9Y4L1 999 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 MSH6P52701 1360 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 GCC2Q8IWJ2 1684 aa14.34□□□□□ -0.11
VAMP4-201ENST00000236192 TPP2P29144 1249 aaPredicted RBP14.33□□□□□ -0.11
VAMP4-201ENST00000236192 IQCDQ96DY2 449 aa14.33□□□□□ -0.11
VAMP4-201ENST00000236192 TSG101Q99816 390 aa14.33□□□□□ -0.11
VAMP4-201ENST00000236192 ABCC4O15439 1325 aa14.33□□□□□ -0.11
VAMP4-201ENST00000236192 NCAPH2Q6IBW4 605 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 CYB5D1Q6P9G0 228 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 MFN1Q8IWA4 741 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 ZNF473Q8WTR7 871 aaKnown RBP14.33□□□□□ -0.12
VAMP4-201ENST00000236192 ZKSCAN4Q969J2 545 aaPredicted RBP14.33□□□□□ -0.12
VAMP4-201ENST00000236192 RMDN2Q96LZ7 410 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 A0A1W2PQ27 194 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 A0A1W2PQ64 194 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 A0A1W2PQD8 194 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 PECAM1P16284 738 aaPredicted RBP14.33□□□□□ -0.12
VAMP4-201ENST00000236192 TCP1P17987 556 aaKnown RBP14.33□□□□□ -0.12
VAMP4-201ENST00000236192 IARSP41252 1262 aaKnown RBP14.33□□□□□ -0.12
VAMP4-201ENST00000236192 DIXDC1Q155Q3 683 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 ARHGAP22Q7Z5H3 698 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 LMBR1Q8WVP7 490 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 PANX2Q96RD6 677 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 ALG1Q9BT22 464 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 VCPKMTQ9H867 229 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 GSCP56915 257 aaPredicted RBP14.33□□□□□ -0.12
VAMP4-201ENST00000236192 PDE1CQ14123 709 aaPredicted RBP14.33□□□□□ -0.12
VAMP4-201ENST00000236192 TOGARAM2Q6ZUX3 1019 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 DHX40Q8IX18 779 aaKnown RBP14.33□□□□□ -0.12
VAMP4-201ENST00000236192 KRI1Q8N9T8 703 aaKnown RBP14.33□□□□□ -0.12
VAMP4-201ENST00000236192 NOX5Q96PH1 765 aa14.33□□□□□ -0.12
VAMP4-201ENST00000236192 CCDC8Q9H0W5 538 aaPredicted RBP14.33□□□□□ -0.12
VAMP4-201ENST00000236192 GMNCA6NCL1 334 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 DTNBO60941 627 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 HNRNPCP07910 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
VAMP4-201ENST00000236192 FLIIQ13045 1269 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 IL17RAQ96F46 866 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 UTP11Q9Y3A2 253 aaKnown RBP14.32□□□□□ -0.12
VAMP4-201ENST00000236192 CTTNBP2Q8WZ74 1663 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 CCDC152Q4G0S7 254 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 ZFYVE27Q5T4F4 411 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 ARHGEF25Q86VW2 580 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 OSBPL3Q9H4L5 887 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 TARSL2A2RTX5 802 aaKnown RBP14.32□□□□□ -0.12
VAMP4-201ENST00000236192 CUL5Q93034 780 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 USP28Q96RU2 1077 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 VPS16Q9H269 839 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 PAPOLBQ9NRJ5 636 aaKnown RBP14.32□□□□□ -0.12
VAMP4-201ENST00000236192 SESN3P58005 492 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 BEND6Q5SZJ8 279 aaPredicted RBP14.32□□□□□ -0.12
VAMP4-201ENST00000236192 RAB3IL1Q8TBN0 382 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 WDR24Q96S15 920 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 NUP58Q9BVL2 599 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.32□□□□□ -0.12
VAMP4-201ENST00000236192 HPCAL4Q9UM19 191 aa14.32□□□□□ -0.12
VAMP4-201ENST00000236192 USP14P54578 494 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 PNOCQ13519 176 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 TROQ12816 1431 aaPredicted RBP14.31□□□□□ -0.12
VAMP4-201ENST00000236192 SOWAHDA6NJG2 315 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 SKAP2O75563 359 aaPredicted RBP14.31□□□□□ -0.12
VAMP4-201ENST00000236192 JAK2O60674 1132 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 NOL3O60936 208 aaKnown RBP14.31□□□□□ -0.12
VAMP4-201ENST00000236192 PDHA1P08559 390 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 ZNF131P52739 623 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 NSMCE1Q8WV22 266 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 SEPT11Q9NVA2 429 aaKnown RBP14.31□□□□□ -0.12
VAMP4-201ENST00000236192 RGL1Q9NZL6 768 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 THEGQ9P2T0 379 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 PPP1R9AQ9ULJ8 1098 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 TRPC6Q9Y210 931 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 PZPP20742 1482 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 CDK13Q14004 1512 aaKnown RBP14.31□□□□□ -0.12
VAMP4-201ENST00000236192 HGSO14964 777 aaPredicted RBP14.31□□□□□ -0.12
VAMP4-201ENST00000236192 DIAPH2O60879 1101 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 NDUFA8P51970 172 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 INF2Q27J81 1249 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 RBM26Q5T8P6 1007 aaKnown RBP14.31□□□□□ -0.12
VAMP4-201ENST00000236192 DHX32Q7L7V1 743 aaKnown RBP14.31□□□□□ -0.12
VAMP4-201ENST00000236192 MIER3Q7Z3K6 550 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 PCDHA7Q9UN72 937 aa14.31□□□□□ -0.12
VAMP4-201ENST00000236192 ENC1O14682 589 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 SASH3O75995 380 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 PFKFB1P16118 471 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 ABCD1P33897 745 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 KLHDC4Q8TBB5 520 aa14.3□□□□□ -0.12
VAMP4-201ENST00000236192 FBXO41Q8TF61 875 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms