RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 WWC2Q6AWC2 1192 aa20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 FBXL16Q8N461 479 aa20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 FAM71BQ8TC56 605 aa20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 TJP1Q07157 1748 aa20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 NBPF26B4DH59 902 aa20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 HSPA1LP34931 641 aa20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 NBPF14Q5TI25 921 aa20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 NBPF10Q6P3W6 841 aaKnown RBP20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 FOXP4Q8IVH2 680 aaPredicted RBP20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 NBPF15Q8N660 670 aa20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 PPM1EQ8WY54 764 aa20.19■□□□□ 0.82
CDKN1B-201ENST00000228872 PALLDQ8WX93 1383 aa20.18■□□□□ 0.82
CDKN1B-201ENST00000228872 KAT6BQ8WYB5 2073 aa20.18■□□□□ 0.82
CDKN1B-201ENST00000228872 CICQ96RK0 1608 aaPredicted RBP20.18■□□□□ 0.82
CDKN1B-201ENST00000228872 FAM237AA0A1B0GTK4 181 aa20.18■□□□□ 0.82
CDKN1B-201ENST00000228872 BMP6P22004 513 aa20.18■□□□□ 0.82
CDKN1B-201ENST00000228872 PTPN12Q05209 780 aaKnown RBP20.18■□□□□ 0.82
CDKN1B-201ENST00000228872 MARCH10Q8NA82 808 aaPredicted RBP20.18■□□□□ 0.82
CDKN1B-201ENST00000228872 CASP8Q14790 479 aa20.18■□□□□ 0.82
CDKN1B-201ENST00000228872 LZTFL1Q9NQ48 299 aa20.18■□□□□ 0.82
CDKN1B-201ENST00000228872 PCDHA5Q9Y5H7 936 aa20.18■□□□□ 0.82
CDKN1B-201ENST00000228872 ZMYM1Q5SVZ6 1142 aa20.17■□□□□ 0.82
CDKN1B-201ENST00000228872 CNNM3Q8NE01 707 aa20.17■□□□□ 0.82
CDKN1B-201ENST00000228872 SOWAHDA6NJG2 315 aa20.17■□□□□ 0.82
CDKN1B-201ENST00000228872 PPP6R2O75170 966 aa20.17■□□□□ 0.82
CDKN1B-201ENST00000228872 ZNF18P17022 549 aa20.17■□□□□ 0.82
CDKN1B-201ENST00000228872 PAXIP1Q6ZW49 1069 aaPredicted RBP20.17■□□□□ 0.82
CDKN1B-201ENST00000228872 CCDC102AQ96A19 550 aa20.17■□□□□ 0.82
CDKN1B-201ENST00000228872 HPS5Q9UPZ3 1129 aa20.17■□□□□ 0.82
CDKN1B-201ENST00000228872 VSNL1P62760 191 aa20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 HSP90B2PQ58FF3 399 aa20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 RESP18Q5W5W9 173 aa20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 TTLL5Q6EMB2 1281 aa20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 GOLGA8BA8MQT2 603 aa20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 GOLIM4O00461 696 aa20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 KIF5CO60282 957 aa20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 LONRF3Q496Y0 759 aa20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 PLBD2Q8NHP8 589 aa20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 RAI14Q9P0K7 980 aa20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 USP21Q9UK80 565 aa20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 ADGRG1Q9Y653 693 aa20.16■□□□□ 0.82
CDKN1B-201ENST00000228872 KLF18A0A0U1RQI7 1052 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 A0A0U1RQJ8 604 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 ATP2B1P20020 1258 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 TUBB4BP68371 445 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 TUBB2AQ13885 445 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 PTPAQ15257 358 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 JMYQ8N9B5 988 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 ATRIPQ8WXE1 791 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 TUBB2BQ9BVA1 445 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 NFE2L3Q9Y4A8 694 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 ANKRD65E5RJM6 399 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 RHOXF2BP0C7M4 288 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 CCDC102BQ68D86 513 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 RAD9BQ6WBX8 426 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 RAB11FIP4Q86YS3 637 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 DRC1Q96MC2 740 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 CLIC6Q96NY7 704 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 RHOXF2Q9BQY4 288 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 GBP3Q9H0R5 595 aa20.15■□□□□ 0.82
CDKN1B-201ENST00000228872 MAST3O60307 1309 aa20.14■□□□□ 0.82
CDKN1B-201ENST00000228872 PHACTR2O75167 634 aa20.14■□□□□ 0.82
CDKN1B-201ENST00000228872 A1BGP04217 495 aa20.14■□□□□ 0.82
CDKN1B-201ENST00000228872 FMR1Q06787 632 aaKnown RBP eCLIP20.14■□□□□ 0.82
CDKN1B-201ENST00000228872 PANX2Q96RD6 677 aa20.14■□□□□ 0.82
CDKN1B-201ENST00000228872 PAG1Q9NWQ8 432 aa20.14■□□□□ 0.82
CDKN1B-201ENST00000228872 CPLX1O14810 134 aa20.14■□□□□ 0.81
CDKN1B-201ENST00000228872 FAM98CQ17RN3 349 aaKnown RBP20.14■□□□□ 0.81
CDKN1B-201ENST00000228872 NCAPGQ9BPX3 1015 aa20.14■□□□□ 0.81
CDKN1B-201ENST00000228872 AKR1B15C9JRZ8 316 aaPredicted RBP20.13■□□□□ 0.81
CDKN1B-201ENST00000228872 CPP00450 1065 aa20.13■□□□□ 0.81
CDKN1B-201ENST00000228872 KIF4BQ2VIQ3 1234 aa20.13■□□□□ 0.81
CDKN1B-201ENST00000228872 ZNF569Q5MCW4 686 aa20.13■□□□□ 0.81
CDKN1B-201ENST00000228872 FAM204AQ9H8W3 233 aa20.13■□□□□ 0.81
CDKN1B-201ENST00000228872 MED4Q9NPJ6 270 aa20.13■□□□□ 0.81
CDKN1B-201ENST00000228872 TOMM22Q9NS69 142 aa20.13■□□□□ 0.81
CDKN1B-201ENST00000228872 ATP5J2-PTCD1G3V325 749 aa20.13■□□□□ 0.81
CDKN1B-201ENST00000228872 FOXN1O15353 648 aa20.13■□□□□ 0.81
CDKN1B-201ENST00000228872 MAN1B1Q9UKM7 699 aa20.13■□□□□ 0.81
CDKN1B-201ENST00000228872 ZNF831Q5JPB2 1677 aa20.13■□□□□ 0.81
CDKN1B-201ENST00000228872 LRRIQ3A6PVS8 624 aaPredicted RBP20.12■□□□□ 0.81
CDKN1B-201ENST00000228872 PPFIA4O75335 1185 aa20.12■□□□□ 0.81
CDKN1B-201ENST00000228872 DNAJC10Q8IXB1 793 aa20.12■□□□□ 0.81
CDKN1B-201ENST00000228872 KCNH3Q9ULD8 1083 aa20.12■□□□□ 0.81
CDKN1B-201ENST00000228872 STARD3NLO95772 234 aa20.12■□□□□ 0.81
CDKN1B-201ENST00000228872 TFRCP02786 760 aaKnown RBP20.12■□□□□ 0.81
CDKN1B-201ENST00000228872 NR1I3Q14994 352 aa20.12■□□□□ 0.81
CDKN1B-201ENST00000228872 UBE3BQ7Z3V4 1068 aa20.12■□□□□ 0.81
CDKN1B-201ENST00000228872 ENOX1Q8TC92 643 aaKnown RBP20.12■□□□□ 0.81
CDKN1B-201ENST00000228872 MYCBPQ99417 103 aaPredicted RBP20.12■□□□□ 0.81
CDKN1B-201ENST00000228872 ACBD3Q9H3P7 528 aa20.12■□□□□ 0.81
CDKN1B-201ENST00000228872 PLEKHA4Q9H4M7 779 aa20.12■□□□□ 0.81
CDKN1B-201ENST00000228872 LOC102724159A0A0B4J2E5 919 aa20.11■□□□□ 0.81
CDKN1B-201ENST00000228872 CTAGE9A4FU28 777 aa20.11■□□□□ 0.81
CDKN1B-201ENST00000228872 PRC1O43663 620 aa20.11■□□□□ 0.81
CDKN1B-201ENST00000228872 MDM2Q00987 491 aaPredicted RBP20.11■□□□□ 0.81
CDKN1B-201ENST00000228872 PWP2Q15269 919 aaKnown RBP20.11■□□□□ 0.81
CDKN1B-201ENST00000228872 VPS37DQ86XT2 251 aa20.11■□□□□ 0.81
CDKN1B-201ENST00000228872 EFCAB13Q8IY85 973 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms