RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 ZBTB43O43298 467 aa19.67■□□□□ 0.74
TVP23C-201ENST00000225576 METAP2P50579 478 aaKnown RBP eCLIP19.67■□□□□ 0.74
TVP23C-201ENST00000225576 SEC23AQ15436 765 aa19.67■□□□□ 0.74
TVP23C-201ENST00000225576 DALRD3Q5D0E6 543 aaKnown RBP19.67■□□□□ 0.74
TVP23C-201ENST00000225576 SYNE3Q6ZMZ3 975 aa19.67■□□□□ 0.74
TVP23C-201ENST00000225576 IQCA1Q86XH1 822 aa19.67■□□□□ 0.74
TVP23C-201ENST00000225576 FAM184AQ8NB25 1140 aa19.67■□□□□ 0.74
TVP23C-201ENST00000225576 ZSCAN10Q96SZ4 725 aaPredicted RBP19.67■□□□□ 0.74
TVP23C-201ENST00000225576 FLT1P17948 1338 aa19.67■□□□□ 0.74
TVP23C-201ENST00000225576 RANBP6O60518 1105 aaKnown RBP19.66■□□□□ 0.74
TVP23C-201ENST00000225576 PRDM1O75626 825 aa19.66■□□□□ 0.74
TVP23C-201ENST00000225576 POLR3DP05423 398 aaPredicted RBP19.66■□□□□ 0.74
TVP23C-201ENST00000225576 SCNN1DP51172 638 aa19.66■□□□□ 0.74
TVP23C-201ENST00000225576 EVX2Q03828 476 aa19.66■□□□□ 0.74
TVP23C-201ENST00000225576 DDX11Q96FC9 970 aa19.66■□□□□ 0.74
TVP23C-201ENST00000225576 ZDHHC15Q96MV8 337 aa19.66■□□□□ 0.74
TVP23C-201ENST00000225576 ZKSCAN3Q9BRR0 538 aa19.66■□□□□ 0.74
TVP23C-201ENST00000225576 NID2Q14112 1375 aa19.66■□□□□ 0.74
TVP23C-201ENST00000225576 YDJCA8MPS7 323 aa19.66■□□□□ 0.74
TVP23C-201ENST00000225576 CPLX1O14810 134 aa19.66■□□□□ 0.74
TVP23C-201ENST00000225576 CRKP46108 304 aa19.66■□□□□ 0.74
TVP23C-201ENST00000225576 MCTP1Q6DN14 999 aa19.66■□□□□ 0.74
TVP23C-201ENST00000225576 APOBEC3HQ6NTF7 200 aaKnown RBP19.66■□□□□ 0.74
TVP23C-201ENST00000225576 ZNF287Q9HBT7 754 aa19.66■□□□□ 0.74
TVP23C-201ENST00000225576 TNKSO95271 1327 aa19.65■□□□□ 0.74
TVP23C-201ENST00000225576 LAMB1P07942 1786 aa19.65■□□□□ 0.74
TVP23C-201ENST00000225576 VPS37CA5D8V6 355 aaPredicted RBP19.65■□□□□ 0.74
TVP23C-201ENST00000225576 PTGER2P43116 358 aa19.65■□□□□ 0.74
TVP23C-201ENST00000225576 CPLX2Q6PUV4 134 aaKnown RBP19.65■□□□□ 0.74
TVP23C-201ENST00000225576 KIAA0825Q8IV33 1275 aa19.65■□□□□ 0.74
TVP23C-201ENST00000225576 LARGE2Q8N3Y3 721 aa19.65■□□□□ 0.74
TVP23C-201ENST00000225576 USP40Q9NVE5 1235 aa19.65■□□□□ 0.74
TVP23C-201ENST00000225576 SERPINA10Q9UK55 444 aa19.65■□□□□ 0.74
TVP23C-201ENST00000225576 TRAK2O60296 914 aa19.64■□□□□ 0.73
TVP23C-201ENST00000225576 CDKL5O76039 1030 aa19.64■□□□□ 0.73
TVP23C-201ENST00000225576 PLCD1P51178 756 aa19.64■□□□□ 0.73
TVP23C-201ENST00000225576 SKOR2Q2VWA4 1001 aaPredicted RBP19.64■□□□□ 0.73
TVP23C-201ENST00000225576 CDC42EP5Q6NZY7 148 aa19.64■□□□□ 0.73
TVP23C-201ENST00000225576 MICU3Q86XE3 530 aa19.64■□□□□ 0.73
TVP23C-201ENST00000225576 ENAHQ8N8S7 591 aaPredicted RBP19.64■□□□□ 0.73
TVP23C-201ENST00000225576 ZNF277Q9NRM2 450 aaPredicted RBP19.64■□□□□ 0.73
TVP23C-201ENST00000225576 SAP30BPQ9UHR5 308 aaKnown RBP19.64■□□□□ 0.73
TVP23C-201ENST00000225576 GOLGA8AA7E2F4 631 aa19.63■□□□□ 0.73
TVP23C-201ENST00000225576 WDHD1O75717 1129 aaPredicted RBP19.63■□□□□ 0.73
TVP23C-201ENST00000225576 FDPSP14324 419 aaKnown RBP19.63■□□□□ 0.73
TVP23C-201ENST00000225576 PPP2R5BQ15173 497 aa19.63■□□□□ 0.73
TVP23C-201ENST00000225576 RAB11FIP4Q86YS3 637 aa19.63■□□□□ 0.73
TVP23C-201ENST00000225576 RGS22Q8NE09 1264 aa19.63■□□□□ 0.73
TVP23C-201ENST00000225576 DYNLL2Q96FJ2 89 aa19.63■□□□□ 0.73
TVP23C-201ENST00000225576 FAM217BQ9NTX9 383 aaPredicted RBP19.63■□□□□ 0.73
TVP23C-201ENST00000225576 MYO3BQ8WXR4 1341 aa19.63■□□□□ 0.73
TVP23C-201ENST00000225576 SCN9AQ15858 1988 aa19.62■□□□□ 0.73
TVP23C-201ENST00000225576 TSPY2A6NKD2 308 aa19.62■□□□□ 0.73
TVP23C-201ENST00000225576 CDC27P30260 824 aa19.62■□□□□ 0.73
TVP23C-201ENST00000225576 ADD1P35611 737 aaKnown RBP19.62■□□□□ 0.73
TVP23C-201ENST00000225576 CCDC178Q5BJE1 867 aa19.62■□□□□ 0.73
TVP23C-201ENST00000225576 C16orf86Q6ZW13 317 aa19.62■□□□□ 0.73
TVP23C-201ENST00000225576 CDC37L1Q7L3B6 337 aa19.62■□□□□ 0.73
TVP23C-201ENST00000225576 ZNF654Q8IZM8 581 aa19.62■□□□□ 0.73
TVP23C-201ENST00000225576 MKNK2Q9HBH9 465 aa19.62■□□□□ 0.73
TVP23C-201ENST00000225576 CCDC196A0A1B0GTZ2 297 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 VIL1P09327 827 aaKnown RBP19.61■□□□□ 0.73
TVP23C-201ENST00000225576 IARSP41252 1262 aaKnown RBP19.61■□□□□ 0.73
TVP23C-201ENST00000225576 NTRK3Q16288 839 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 IFIT1BQ5T764 474 aaKnown RBP19.61■□□□□ 0.73
TVP23C-201ENST00000225576 TTC6Q86TZ1 520 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 NAV1Q8NEY1 1877 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 TCP11L1Q9NUJ3 509 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 LMBRD1Q9NUN5 540 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 ORC3Q9UBD5 711 aaPredicted RBP19.61■□□□□ 0.73
TVP23C-201ENST00000225576 PPP1R1BQ9UD71 204 aaPredicted RBP19.61■□□□□ 0.73
TVP23C-201ENST00000225576 ZNF646O15015 1829 aaPredicted RBP19.61■□□□□ 0.73
TVP23C-201ENST00000225576 DDX60LQ5H9U9 1706 aaKnown RBP19.61■□□□□ 0.73
TVP23C-201ENST00000225576 H3BQV1 296 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 RXRAP19793 462 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 TFAP4Q01664 338 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 SLC4A8Q2Y0W8 1093 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 FAM47AQ5JRC9 791 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 IFFO2Q5TF58 517 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 RSBN1LQ6PCB5 846 aaPredicted RBP19.61■□□□□ 0.73
TVP23C-201ENST00000225576 NIM1KQ8IY84 436 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 ZNF444Q8N0Y2 327 aaPredicted RBP19.61■□□□□ 0.73
TVP23C-201ENST00000225576 MYL10Q9BUA6 226 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 ZNRF3Q9ULT6 936 aa19.61■□□□□ 0.73
TVP23C-201ENST00000225576 NPM3O75607 178 aaKnown RBP19.6■□□□□ 0.73
TVP23C-201ENST00000225576 CALM1P0DP23 149 aa19.6■□□□□ 0.73
TVP23C-201ENST00000225576 CALM2P0DP24 149 aa19.6■□□□□ 0.73
TVP23C-201ENST00000225576 CALM3P0DP25 149 aa19.6■□□□□ 0.73
TVP23C-201ENST00000225576 CDK8P49336 464 aa19.6■□□□□ 0.73
TVP23C-201ENST00000225576 RTN1Q16799 776 aa19.6■□□□□ 0.73
TVP23C-201ENST00000225576 CATIPQ7Z7H3 387 aa19.6■□□□□ 0.73
TVP23C-201ENST00000225576 DGKHQ86XP1 1220 aa19.6■□□□□ 0.73
TVP23C-201ENST00000225576 FANCBQ8NB91 859 aa19.6■□□□□ 0.73
TVP23C-201ENST00000225576 ANKS1AQ92625 1134 aa19.6■□□□□ 0.73
TVP23C-201ENST00000225576 CHAMP1Q96JM3 812 aa19.6■□□□□ 0.73
TVP23C-201ENST00000225576 TAOK3Q9H2K8 898 aa19.6■□□□□ 0.73
TVP23C-201ENST00000225576 DDX4Q9NQI0 724 aaKnown RBP19.6■□□□□ 0.73
TVP23C-201ENST00000225576 CDK5RAP2Q96SN8 1893 aa19.59■□□□□ 0.73
TVP23C-201ENST00000225576 IFNAR1P17181 557 aa19.59■□□□□ 0.73
TVP23C-201ENST00000225576 RASA1P20936 1047 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms