RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 METTL22Q9BUU2 404 aaPredicted RBP12.38□□□□□ -0.43
KNOP1-201ENST00000219837 CARD10Q9BWT7 1032 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 TNNQ9UQP3 1299 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 CDCA7Q9BWT1 371 aaPredicted RBP12.38□□□□□ -0.43
KNOP1-201ENST00000219837 MRPL44Q9H9J2 332 aaKnown RBP12.38□□□□□ -0.43
KNOP1-201ENST00000219837 RAD50Q92878 1312 aa12.38□□□□□ -0.43
KNOP1-201ENST00000219837 SATB1Q01826 763 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 ARHGEF16Q5VV41 709 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 EPSTI1Q96J88 318 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 MICALL1Q8N3F8 863 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 METTL13Q8N6R0 699 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 BAG1Q99933 345 aaPredicted RBP12.37□□□□□ -0.43
KNOP1-201ENST00000219837 USP21Q9UK80 565 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
KNOP1-201ENST00000219837 CEP128Q6ZU80 1094 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 RPUSD2Q8IZ73 545 aaKnown RBP12.37□□□□□ -0.43
KNOP1-201ENST00000219837 TTLL3Q9Y4R7 772 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 V9GY48 417 aaPredicted RBP12.37□□□□□ -0.43
KNOP1-201ENST00000219837 ERCC6LQ2NKX8 1250 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 FYB2Q5VWT5 728 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 PRPF31Q8WWY3 499 aaKnown RBP12.37□□□□□ -0.43
KNOP1-201ENST00000219837 HAUS2Q9NVX0 235 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 CHMLP26374 656 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 CLUL1Q15846 466 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 CYP26C1Q6V0L0 522 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 DYMQ7RTS9 669 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 MAPKAPK5Q8IW41 473 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 WDR66Q8TBY9 1149 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 PAGR1Q9BTK6 254 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 HSPA1LP34931 641 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 INTS8Q75QN2 995 aaKnown RBP12.37□□□□□ -0.43
KNOP1-201ENST00000219837 NBPF11Q86T75 865 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 CCDC125Q86Z20 511 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 CNGA4Q8IV77 575 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 SPATA5Q8NB90 893 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 CD2APQ9Y5K6 639 aa12.37□□□□□ -0.43
KNOP1-201ENST00000219837 CPA1P15085 419 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 KIF22Q14807 665 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 FAM102BQ5T8I3 360 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 GSDMBQ8TAX9 411 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 RAD51AP2Q09MP3 1159 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 RIOK1Q9BRS2 568 aaKnown RBP12.36□□□□□ -0.43
KNOP1-201ENST00000219837 PPP1R2P41236 205 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 TIMM10P62072 90 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 NKIRAS1Q9NYS0 192 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 DNM3Q9UQ16 869 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 CFBP00751 764 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 CNGA1P29973 690 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 TTC38Q5R3I4 469 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 GPIHBP1Q8IV16 184 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 AFAP1L2Q8N4X5 818 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 CCDC110Q8TBZ0 833 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 TMEM87BQ96K49 555 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 NOX5Q96PH1 765 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 MYO1AQ9UBC5 1043 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 FRMPD2Q68DX3 1309 aaPredicted RBP12.36□□□□□ -0.43
KNOP1-201ENST00000219837 VIMP08670 466 aaKnown RBP12.36□□□□□ -0.43
KNOP1-201ENST00000219837 PPP2R3AQ06190 1150 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 FAM47CQ5HY64 1035 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 UTP14CQ5TAP6 766 aaKnown RBP12.36□□□□□ -0.43
KNOP1-201ENST00000219837 SMCR8Q8TEV9 937 aaPredicted RBP12.36□□□□□ -0.43
KNOP1-201ENST00000219837 AS3MTQ9HBK9 375 aa12.36□□□□□ -0.43
KNOP1-201ENST00000219837 A0A1W2PP64 1363 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 PPIP5K2O43314 1243 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 ALDH1B1P30837 517 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 SLC1A4P43007 532 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 CACYBPQ9HB71 228 aaKnown RBP12.35□□□□□ -0.43
KNOP1-201ENST00000219837 FAM184BQ9ULE4 1060 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 ZNF710Q8N1W2 664 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 SNX29Q8TEQ0 813 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 SOS1Q07889 1333 aaPredicted RBP12.35□□□□□ -0.43
KNOP1-201ENST00000219837 POLR2DO15514 142 aaKnown RBP12.35□□□□□ -0.43
KNOP1-201ENST00000219837 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
KNOP1-201ENST00000219837 PAK1Q13153 545 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 CASC4Q6P4E1 433 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 ZNF790Q6PG37 636 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 DDX17Q92841 729 aaKnown RBP12.35□□□□□ -0.43
KNOP1-201ENST00000219837 ZHX1Q9UKY1 873 aaPredicted RBP12.35□□□□□ -0.43
KNOP1-201ENST00000219837 MROH5Q6ZUA9 1318 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 UGGT2Q9NYU1 1516 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 ERCC3P19447 782 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 TRIM14Q14142 442 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 FAM47AQ5JRC9 791 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 UHRF1BP1Q6BDS2 1440 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 IGSF22Q8N9C0 903 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 KLHDC4Q8TBB5 520 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 MYL10Q9BUA6 226 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 GPR162Q16538 588 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 SNX21Q969T3 373 aa12.35□□□□□ -0.43
KNOP1-201ENST00000219837 ABL1P00519 1130 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 SARNPP82979 210 aaKnown RBP12.34□□□□□ -0.43
KNOP1-201ENST00000219837 PLEKHM2Q8IWE5 1019 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 NELFCDQ8IXH7 590 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 GABPB2Q8TAK5 448 aaPredicted RBP12.34□□□□□ -0.43
KNOP1-201ENST00000219837 FAM76AQ8TAV0 307 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 PRAG1Q86YV5 1406 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 EYA2O00167 538 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 GPAA1O43292 621 aa12.34□□□□□ -0.43
KNOP1-201ENST00000219837 CAPN2P17655 700 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms