RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PLEKHH2Q8IVE3 1493 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 CECR2Q9BXF3 1484 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 LRRD1A4D1F6 860 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 TTC4O95801 387 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 EEF1B2P24534 225 aaKnown RBP16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 PHBP35232 272 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 SLFN5Q08AF3 891 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 CCDC124Q96CT7 223 aaKnown RBP16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 ANO3Q9BYT9 981 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 RLBP1P12271 317 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 RSBN1LQ6PCB5 846 aaPredicted RBP16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 CCDC138Q96M89 665 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 TBC1D8BQ0IIM8 1120 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 CEP19Q96LK0 163 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 SPC25Q9HBM1 224 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 KLHL14Q9P2G3 628 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 GOLGA4Q13439 2230 aaKnown RBP16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 CNNM4Q6P4Q7 775 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 KCNH5Q8NCM2 988 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 MAPK8IP1Q9UQF2 711 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 MAGEB6P1A0A0J9YX57 407 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 FAM170AA1A519 330 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 MCMDC2Q4G0Z9 681 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 NBPF5PQ86XG9 351 aaPredicted RBP16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 JARID2Q92833 1246 aaPredicted RBP16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 HDAC11Q96DB2 347 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 SPDYE2BA6NHP3 402 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 OATP04181 439 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 SPDYE6P0CI01 402 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 NPR1P16066 1061 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 NLRP7Q8WX94 980 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 NBPF3Q9H094 633 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 ITKQ08881 620 aa16.17■□□□□ 0.18
SPTLC2-201ENST00000216484 KRT81Q14533 505 aa16.17■□□□□ 0.18
SPTLC2-201ENST00000216484 KRT71Q3SY84 523 aa16.17■□□□□ 0.18
SPTLC2-201ENST00000216484 MICAL3Q7RTP6 2002 aa16.17■□□□□ 0.18
SPTLC2-201ENST00000216484 DRC3Q9H069 523 aa16.17■□□□□ 0.18
SPTLC2-201ENST00000216484 CFAP221Q4G0U5 840 aa16.17■□□□□ 0.18
SPTLC2-201ENST00000216484 CFAP61Q8NHU2 1237 aa16.17■□□□□ 0.18
SPTLC2-201ENST00000216484 ATAD2Q6PL18 1390 aa16.17■□□□□ 0.18
SPTLC2-201ENST00000216484 RAB17Q9H0T7 212 aa16.17■□□□□ 0.18
SPTLC2-201ENST00000216484 IRAK4Q9NWZ3 460 aa16.17■□□□□ 0.18
SPTLC2-201ENST00000216484 CD2APQ9Y5K6 639 aa16.17■□□□□ 0.18
SPTLC2-201ENST00000216484 ANKRD50Q9ULJ7 1429 aa16.17■□□□□ 0.18
SPTLC2-201ENST00000216484 NOP56O00567 594 aaKnown RBP16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 IQUBQ8NA54 791 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 P3H4Q92791 437 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 ERO1AQ96HE7 468 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 GPHNQ9NQX3 736 aaPredicted RBP16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 PARP2Q9UGN5 583 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 MYO1AQ9UBC5 1043 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 ABL1P00519 1130 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 EEF1DP29692 281 aaKnown RBP16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 ESRRGP62508 458 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 SYCE1Q8N0S2 351 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 THEMISQ8N1K5 641 aaPredicted RBP16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 CTTNBP2NLQ9P2B4 639 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 LARSQ9P2J5 1176 aaKnown RBP16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 KRT19P08727 400 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 PAK2Q13177 524 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 MTMR3Q13615 1198 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 FNBP4Q8N3X1 1017 aaPredicted RBP16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 TEKT2Q9UIF3 430 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 HSP90AA5PQ58FG0 334 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 TTC22Q5TAA0 569 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 CEP104O60308 925 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 ELF2Q15723 593 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 PIP4K2CQ8TBX8 421 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 RNF217Q8TC41 542 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 NRBF2Q96F24 287 aa16.16■□□□□ 0.18
SPTLC2-201ENST00000216484 PDE6AP16499 860 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 TRIM14Q14142 442 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 DDX41Q9UJV9 622 aaKnown RBP16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 ELP1O95163 1332 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 F13A1P00488 732 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 OAS2P29728 719 aaKnown RBP16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 BCRP11274 1271 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 SLC9C1Q4G0N8 1177 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 PEX26Q7Z412 305 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 SMYD2Q9NRG4 433 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 SYNRGQ9UMZ2 1314 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 UQCRFS1P1P0C7P4 283 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 POLD1P28340 1107 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 GUCY2FP51841 1108 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 RAB3GAP1Q15042 981 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 CWF19L2Q2TBE0 894 aaKnown RBP16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 SPATS2Q86XZ4 545 aaKnown RBP16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 ECE1P42892 770 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 CAMSAP2Q08AD1 1489 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 SLC12A1Q13621 1099 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 AMOTL2Q9Y2J4 779 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 NAIPQ13075 1403 aa16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 RARSP54136 660 aaKnown RBP16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 MYCBPQ99417 103 aaPredicted RBP16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 RBM8AQ9Y5S9 174 aaKnown RBP16.15■□□□□ 0.18
SPTLC2-201ENST00000216484 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.15■□□□□ 0.184e-6■■■■□ 22.8
SPTLC2-201ENST00000216484 KRT10P13645 584 aa16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 FOXD4Q12950 439 aaPredicted RBP16.14■□□□□ 0.17
SPTLC2-201ENST00000216484 MAGEB6Q8N7X4 407 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms