RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 F13A1P00488 732 aa23.06■■□□□ 1.28
TNFRSF1A-201ENST00000162749 FKBP1AP62942 108 aaKnown RBP23.06■■□□□ 1.28
TNFRSF1A-201ENST00000162749 FER1L6Q2WGJ9 1857 aa23.06■■□□□ 1.28
TNFRSF1A-201ENST00000162749 ROBO3Q96MS0 1386 aa23.06■■□□□ 1.28
TNFRSF1A-201ENST00000162749 RANBP6O60518 1105 aaKnown RBP23.06■■□□□ 1.28
TNFRSF1A-201ENST00000162749 SLC3A2P08195 630 aaKnown RBP23.06■■□□□ 1.28
TNFRSF1A-201ENST00000162749 SCNN1DP51172 638 aa23.06■■□□□ 1.28
TNFRSF1A-201ENST00000162749 HMGN5P82970 282 aaKnown RBP23.06■■□□□ 1.28
TNFRSF1A-201ENST00000162749 SGIP1Q9BQI5 828 aa23.06■■□□□ 1.28
TNFRSF1A-201ENST00000162749 PIM2Q9P1W9 311 aa23.06■■□□□ 1.28
TNFRSF1A-201ENST00000162749 FLT1P17948 1338 aa23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 DHX16O60231 1041 aaKnown RBP23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 NFXL1Q6ZNB6 911 aa23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 UBAC1Q9BSL1 405 aa23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 ERICH2A1L162 156 aa23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 USP17L3A6NCW0 530 aa23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 USP17L4A6NCW7 530 aa23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 RXRAP19793 462 aa23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 PDE4BQ07343 736 aa23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 WTAPQ15007 396 aa23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 CDC37L1Q7L3B6 337 aa23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 USP17L1Q7RTZ2 530 aa23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 MICU3Q86XE3 530 aa23.05■■□□□ 1.28
TNFRSF1A-201ENST00000162749 COL4A5P29400 1685 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 TNKSO95271 1327 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 YDJCA8MPS7 323 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 PPFIA3O75145 1194 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 SEC23AQ15436 765 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 HHIPL2Q6UWX4 724 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 SLC12A7Q9Y666 1083 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 CCDC69A6NI79 296 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 ZBTB43O43298 467 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 METAP2P50579 478 aaKnown RBP eCLIP23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 KIAA0825Q8IV33 1275 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 AMOTL1Q8IY63 956 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 FAM184AQ8NB25 1140 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 TEKT1Q969V4 418 aa23.04■■□□□ 1.28
TNFRSF1A-201ENST00000162749 MYH8P13535 1937 aa23.03■■□□□ 1.28
TNFRSF1A-201ENST00000162749 PSDA5PKW4 1024 aaPredicted RBP23.03■■□□□ 1.28
TNFRSF1A-201ENST00000162749 PLCD1P51178 756 aa23.03■■□□□ 1.28
TNFRSF1A-201ENST00000162749 FOXD4L6Q3SYB3 417 aaPredicted RBP23.03■■□□□ 1.28
TNFRSF1A-201ENST00000162749 FOXD4L3Q6VB84 417 aaPredicted RBP23.03■■□□□ 1.28
TNFRSF1A-201ENST00000162749 MYL10Q9BUA6 226 aa23.03■■□□□ 1.28
TNFRSF1A-201ENST00000162749 SAP30BPQ9UHR5 308 aaKnown RBP23.03■■□□□ 1.28
TNFRSF1A-201ENST00000162749 FDPSP14324 419 aaKnown RBP23.02■■□□□ 1.28
TNFRSF1A-201ENST00000162749 TMTC2Q8N394 836 aa23.02■■□□□ 1.28
TNFRSF1A-201ENST00000162749 ENAHQ8N8S7 591 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF1A-201ENST00000162749 ZSCAN10Q96SZ4 725 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF1A-201ENST00000162749 CPLX1O14810 134 aa23.02■■□□□ 1.28
TNFRSF1A-201ENST00000162749 ADD1P35611 737 aaKnown RBP23.02■■□□□ 1.28
TNFRSF1A-201ENST00000162749 IQCA1Q86XH1 822 aa23.02■■□□□ 1.28
TNFRSF1A-201ENST00000162749 DYNLL2Q96FJ2 89 aa23.02■■□□□ 1.28
TNFRSF1A-201ENST00000162749 PPP1R1BQ9UD71 204 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF1A-201ENST00000162749 NID2Q14112 1375 aa23.01■■□□□ 1.27
TNFRSF1A-201ENST00000162749 POLR3DP05423 398 aaPredicted RBP23.01■■□□□ 1.27
TNFRSF1A-201ENST00000162749 CDC27P30260 824 aa23.01■■□□□ 1.27
TNFRSF1A-201ENST00000162749 SOGA3Q5TF21 947 aa23.01■■□□□ 1.27
TNFRSF1A-201ENST00000162749 APOBEC3HQ6NTF7 200 aaKnown RBP23.01■■□□□ 1.27
TNFRSF1A-201ENST00000162749 ZNF277Q9NRM2 450 aaPredicted RBP23.01■■□□□ 1.27
TNFRSF1A-201ENST00000162749 MYH6P13533 1939 aa23.01■■□□□ 1.27
TNFRSF1A-201ENST00000162749 MYH15Q9Y2K3 1946 aa23.01■■□□□ 1.27
TNFRSF1A-201ENST00000162749 CRKP46108 304 aa23.01■■□□□ 1.27
TNFRSF1A-201ENST00000162749 CCDC144CPQ8IYA2 1237 aa23.01■■□□□ 1.27
TNFRSF1A-201ENST00000162749 RTN4Q9NQC3 1192 aaKnown RBP23.01■■□□□ 1.27
TNFRSF1A-201ENST00000162749 KIF3AQ9Y496 699 aa23.01■■□□□ 1.27
TNFRSF1A-201ENST00000162749 WDHD1O75717 1129 aaPredicted RBP23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 KLHL40Q2TBA0 621 aa23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 DALRD3Q5D0E6 543 aaKnown RBP23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 FAM47AQ5JRC9 791 aa23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 MRIQ9BWK5 157 aa23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 FAM217BQ9NTX9 383 aaPredicted RBP23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 LMBRD1Q9NUN5 540 aa23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 ATP6V1DQ9Y5K8 247 aa23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 PTGER2P43116 358 aa23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 GAS2L3Q86XJ1 694 aa23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 LARGE2Q8N3Y3 721 aa23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 ZDHHC15Q96MV8 337 aa23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 PANK2Q9BZ23 570 aa23■■□□□ 1.27
TNFRSF1A-201ENST00000162749 GOLGA8AA7E2F4 631 aa22.99■■□□□ 1.27
TNFRSF1A-201ENST00000162749 SYNE3Q6ZMZ3 975 aa22.99■■□□□ 1.27
TNFRSF1A-201ENST00000162749 FERMT3Q86UX7 667 aa22.99■■□□□ 1.27
TNFRSF1A-201ENST00000162749 HDLBPQ00341 1268 aaKnown RBP22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 NTRK3Q16288 839 aa22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 CDC42EP5Q6NZY7 148 aa22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 ZNF654Q8IZM8 581 aa22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 SLC44A5Q8NCS7 719 aa22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 DDX4Q9NQI0 724 aaKnown RBP22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 USP40Q9NVE5 1235 aa22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 DDX49Q9Y6V7 483 aaKnown RBP22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 TSPY2A6NKD2 308 aa22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 NMT2O60551 498 aa22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 MRE11P49959 708 aa22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 RCAN1P53805 252 aa22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 PICALMQ13492 652 aa22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 CD2APQ9Y5K6 639 aa22.98■■□□□ 1.27
TNFRSF1A-201ENST00000162749 H3BQV1 296 aa22.97■■□□□ 1.27
TNFRSF1A-201ENST00000162749 PRPF40AO75400 957 aaKnown RBP22.97■■□□□ 1.27
TNFRSF1A-201ENST00000162749 NT5C2P49902 561 aa22.97■■□□□ 1.27
TNFRSF1A-201ENST00000162749 IFIT1BQ5T764 474 aaKnown RBP22.97■■□□□ 1.27
TNFRSF1A-201ENST00000162749 IFFO2Q5TF58 517 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms