RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 USH2AO75445 5202 aa1.96□□□□□ -2.1
SDCBP-213ENST00000630925 KRTAP20-1Q3LI63 56 aa1.95□□□□□ -2.1
SDCBP-213ENST00000630925 FCGBPQ9Y6R7 5405 aaPredicted RBP1.94□□□□□ -2.1
SDCBP-213ENST00000630925 DEFB105AQ8NG35 78 aa1.93□□□□□ -2.1
SDCBP-213ENST00000630925 MMP24-AS1A0A0U1RRL7 71 aa1.92□□□□□ -2.1
SDCBP-213ENST00000630925 A0A096LNI7 61 aa1.92□□□□□ -2.1
SDCBP-213ENST00000630925 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
SDCBP-213ENST00000630925 MUC17Q685J3 4493 aa1.9□□□□□ -2.1
SDCBP-213ENST00000630925 SPRR1BP22528 89 aa1.9□□□□□ -2.11
SDCBP-213ENST00000630925 KRTAP13-1Q8IUC0 172 aa1.89□□□□□ -2.11
SDCBP-213ENST00000630925 PRLHP81277 87 aa1.86□□□□□ -2.11
SDCBP-213ENST00000630925 A0A0D9SG42 100 aa1.84□□□□□ -2.12
SDCBP-213ENST00000630925 KRTAP9-6A8MVA2 160 aa1.84□□□□□ -2.12
SDCBP-213ENST00000630925 KRTAP10-5P60370 271 aa1.83□□□□□ -2.12
SDCBP-213ENST00000630925 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
SDCBP-213ENST00000630925 S4R3F8 94 aa1.82□□□□□ -2.12
SDCBP-213ENST00000630925 MUC12Q9UKN1 5478 aa1.82□□□□□ -2.12
SDCBP-213ENST00000630925 KMT2DO14686 5537 aa1.78□□□□□ -2.12
SDCBP-213ENST00000630925 MT1HP80294 61 aa1.78□□□□□ -2.13
SDCBP-213ENST00000630925 KRTAP2-3P0C7H8 128 aa1.77□□□□□ -2.13
SDCBP-213ENST00000630925 KRTAP2-4Q9BYR9 128 aa1.77□□□□□ -2.13
SDCBP-213ENST00000630925 SPINK6Q6UWN8 80 aa1.76□□□□□ -2.13
SDCBP-213ENST00000630925 KRTAP19-2Q3LHN2 52 aa1.75□□□□□ -2.13
SDCBP-213ENST00000630925 KRTAP4-1Q9BYQ7 146 aa1.75□□□□□ -2.13
SDCBP-213ENST00000630925 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
SDCBP-213ENST00000630925 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
SDCBP-213ENST00000630925 RPS29P62273 56 aaKnown RBP1.71□□□□□ -2.13
SDCBP-213ENST00000630925 C9orf92A6NGG3 77 aa1.69□□□□□ -2.14
SDCBP-213ENST00000630925 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
SDCBP-213ENST00000630925 KRTAP19-6Q3LI70 58 aa1.68□□□□□ -2.14
SDCBP-213ENST00000630925 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
SDCBP-213ENST00000630925 SPINK1P00995 79 aa1.68□□□□□ -2.14
SDCBP-213ENST00000630925 FLGP20930 4061 aaPredicted RBP1.67□□□□□ -2.14
SDCBP-213ENST00000630925 KRTAP12-3P60328 96 aa1.63□□□□□ -2.15
SDCBP-213ENST00000630925 M0R2T5 61 aa1.6□□□□□ -2.15
SDCBP-213ENST00000630925 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.16
SDCBP-213ENST00000630925 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
SDCBP-213ENST00000630925 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
SDCBP-213ENST00000630925 DSTQ03001 7570 aaKnown RBP1.57□□□□□ -2.16
SDCBP-213ENST00000630925 LCE3AQ5TA76 89 aa1.55□□□□□ -2.16
SDCBP-213ENST00000630925 MT2AP02795 61 aa1.54□□□□□ -2.16
SDCBP-213ENST00000630925 MT1FP04733 61 aa1.54□□□□□ -2.16
SDCBP-213ENST00000630925 SPRR2EP22531 72 aa1.52□□□□□ -2.17
SDCBP-213ENST00000630925 SPRR2BP35325 72 aa1.52□□□□□ -2.17
SDCBP-213ENST00000630925 SPRR2AP35326 72 aa1.52□□□□□ -2.17
SDCBP-213ENST00000630925 M0QZ58 72 aa1.49□□□□□ -2.17
SDCBP-213ENST00000630925 SPRR2DP22532 72 aa1.48□□□□□ -2.17
SDCBP-213ENST00000630925 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
SDCBP-213ENST00000630925 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
SDCBP-213ENST00000630925 LCE1CQ5T751 118 aa1.42□□□□□ -2.18
SDCBP-213ENST00000630925 LCE1BQ5T7P3 118 aa1.42□□□□□ -2.18
SDCBP-213ENST00000630925 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
SDCBP-213ENST00000630925 MT4P47944 62 aa1.34□□□□□ -2.19
SDCBP-213ENST00000630925 TNP1P09430 55 aa1.32□□□□□ -2.2
SDCBP-213ENST00000630925 MT1BP07438 61 aa1.3□□□□□ -2.2
SDCBP-213ENST00000630925 SPRR2GQ9BYE4 73 aa1.29□□□□□ -2.2
SDCBP-213ENST00000630925 KRTAP8-1Q8IUC2 63 aa1.27□□□□□ -2.21
SDCBP-213ENST00000630925 PRM1P04553 51 aa1.27□□□□□ -2.21
SDCBP-213ENST00000630925 KRTAP19-8Q3LI54 63 aa1.26□□□□□ -2.21
SDCBP-213ENST00000630925 MT1XP80297 61 aa1.23□□□□□ -2.21
SDCBP-213ENST00000630925 KRTAP19-3Q7Z4W3 81 aa1.22□□□□□ -2.21
SDCBP-213ENST00000630925 KRTAP20-2Q3LI61 65 aa1.17□□□□□ -2.22
SDCBP-213ENST00000630925 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
SDCBP-213ENST00000630925 KRTAP19-5Q3LI72 72 aa1.13□□□□□ -2.23
SDCBP-213ENST00000630925 SYNE1Q8NF91 8797 aaKnown RBP1.11□□□□□ -2.23
SDCBP-213ENST00000630925 KRTAP19-7Q3SYF9 63 aa1.09□□□□□ -2.23
SDCBP-213ENST00000630925 MT1EP04732 61 aa1.08□□□□□ -2.24
SDCBP-213ENST00000630925 MT1LQ93083 61 aa1.05□□□□□ -2.24
SDCBP-213ENST00000630925 MT1MQ8N339 61 aa1.02□□□□□ -2.25
SDCBP-213ENST00000630925 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
SDCBP-213ENST00000630925 MT1GP13640 62 aa1.01□□□□□ -2.25
SDCBP-213ENST00000630925 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
SDCBP-213ENST00000630925 MT1AP04731 61 aa0.98□□□□□ -2.25
SDCBP-213ENST00000630925 KRTAP6-2Q3LI66 62 aa0.95□□□□□ -2.26
SDCBP-213ENST00000630925 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
SDCBP-213ENST00000630925 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
SDCBP-213ENST00000630925 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 58.2 ms