RNA–Protein interactions for RNA: ENST00000618666.4

CCNT1-205, Transcript of cyclin T1, humanhuman

TSL 2 BASIC

Gene CCNT1, Length 6,915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-205ENST00000618666 FSIP2Q5CZC0 6907 aa1.74□□□□□ -2.13
CCNT1-205ENST00000618666 MUC17Q685J3 4493 aa1.72□□□□□ -2.13
CCNT1-205ENST00000618666 MT1XP80297 61 aa1.72□□□□□ -2.13
CCNT1-205ENST00000618666 KRTAP9-7A8MTY7 169 aa1.71□□□□□ -2.14
CCNT1-205ENST00000618666 KRTAP19-2Q3LHN2 52 aa1.71□□□□□ -2.14
CCNT1-205ENST00000618666 MT3P25713 68 aa1.7□□□□□ -2.14
CCNT1-205ENST00000618666 MT1BP07438 61 aa1.68□□□□□ -2.14
CCNT1-205ENST00000618666 MUC2Q02817 5179 aa1.68□□□□□ -2.14
CCNT1-205ENST00000618666 KRTAP9-8Q9BYQ0 159 aa1.68□□□□□ -2.14
CCNT1-205ENST00000618666 LCE1EQ5T753 118 aa1.68□□□□□ -2.14
CCNT1-205ENST00000618666 USH2AO75445 5202 aa1.68□□□□□ -2.14
CCNT1-205ENST00000618666 SPRR2EP22531 72 aa1.66□□□□□ -2.14
CCNT1-205ENST00000618666 SPRR2BP35325 72 aa1.66□□□□□ -2.14
CCNT1-205ENST00000618666 SPRR2AP35326 72 aa1.66□□□□□ -2.14
CCNT1-205ENST00000618666 KRTAP9-3Q9BYQ3 159 aa1.66□□□□□ -2.14
CCNT1-205ENST00000618666 KRTAP4-6Q9BYQ5 205 aa1.65□□□□□ -2.15
CCNT1-205ENST00000618666 FLGP20930 4061 aaPredicted RBP1.65□□□□□ -2.15
CCNT1-205ENST00000618666 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
CCNT1-205ENST00000618666 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
CCNT1-205ENST00000618666 LCE1AQ5T7P2 110 aa1.63□□□□□ -2.15
CCNT1-205ENST00000618666 MT1LQ93083 61 aa1.62□□□□□ -2.15
CCNT1-205ENST00000618666 SPRR2DP22532 72 aa1.62□□□□□ -2.15
CCNT1-205ENST00000618666 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
CCNT1-205ENST00000618666 SSPOA2VEC9 5147 aa1.6□□□□□ -2.15
CCNT1-205ENST00000618666 KMT2DO14686 5537 aa1.6□□□□□ -2.15
CCNT1-205ENST00000618666 KRTAP9-6A8MVA2 160 aa1.59□□□□□ -2.16
CCNT1-205ENST00000618666 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.16
CCNT1-205ENST00000618666 LCE1DQ5T752 114 aa1.59□□□□□ -2.16
CCNT1-205ENST00000618666 KRTAP19-6Q3LI70 58 aa1.58□□□□□ -2.16
CCNT1-205ENST00000618666 MACF1Q9UPN3 7388 aaKnown RBP1.56□□□□□ -2.16
CCNT1-205ENST00000618666 MT1EP04732 61 aa1.55□□□□□ -2.16
CCNT1-205ENST00000618666 MT4P47944 62 aa1.53□□□□□ -2.16
CCNT1-205ENST00000618666 KRTAP9-2Q9BYQ4 174 aa1.52□□□□□ -2.17
CCNT1-205ENST00000618666 LCE1FQ5T754 118 aa1.51□□□□□ -2.17
CCNT1-205ENST00000618666 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
CCNT1-205ENST00000618666 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
CCNT1-205ENST00000618666 KRTAP2-1Q9BYU5 128 aa1.51□□□□□ -2.17
CCNT1-205ENST00000618666 LCE5AQ5TCM9 118 aa1.5□□□□□ -2.17
CCNT1-205ENST00000618666 MT1MQ8N339 61 aa1.5□□□□□ -2.17
CCNT1-205ENST00000618666 KRTAP4-11Q9BYQ6 195 aa1.49□□□□□ -2.17
CCNT1-205ENST00000618666 MDN1Q9NU22 5596 aa1.47□□□□□ -2.17
CCNT1-205ENST00000618666 MT1AP04731 61 aa1.46□□□□□ -2.18
CCNT1-205ENST00000618666 KRTAP2-2Q9BYT5 123 aa1.45□□□□□ -2.18
CCNT1-205ENST00000618666 KRTAP9-6A0A140TA67 174 aa1.45□□□□□ -2.18
CCNT1-205ENST00000618666 LCE1CQ5T751 118 aa1.45□□□□□ -2.18
CCNT1-205ENST00000618666 KRTAP19-7Q3SYF9 63 aa1.43□□□□□ -2.18
CCNT1-205ENST00000618666 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
CCNT1-205ENST00000618666 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
CCNT1-205ENST00000618666 GPR98Q8WXG9 6306 aa1.42□□□□□ -2.18
CCNT1-205ENST00000618666 MUC12Q9UKN1 5478 aa1.38□□□□□ -2.19
CCNT1-205ENST00000618666 NEBP20929 6669 aa1.37□□□□□ -2.19
CCNT1-205ENST00000618666 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.37□□□□□ -2.19
CCNT1-205ENST00000618666 KRTAP4-12Q9BQ66 201 aa1.36□□□□□ -2.19
CCNT1-205ENST00000618666 KRTAP20-1Q3LI63 56 aa1.35□□□□□ -2.19
CCNT1-205ENST00000618666 KRTAP4-4Q9BYR3 166 aa1.34□□□□□ -2.2
CCNT1-205ENST00000618666 KRTAP5-3Q6L8H2 238 aa1.32□□□□□ -2.2
CCNT1-205ENST00000618666 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
CCNT1-205ENST00000618666 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.28□□□□□ -2.2
CCNT1-205ENST00000618666 KRTAP5-9P26371 169 aa1.27□□□□□ -2.21
CCNT1-205ENST00000618666 KRTAP20-2Q3LI61 65 aa1.27□□□□□ -2.21
CCNT1-205ENST00000618666 KRTAP5-2Q701N4 177 aa1.25□□□□□ -2.21
CCNT1-205ENST00000618666 KRTAP4-2Q9BYR5 136 aa1.24□□□□□ -2.21
CCNT1-205ENST00000618666 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
CCNT1-205ENST00000618666 KRTAP5-5Q701N2 237 aaPredicted RBP1.22□□□□□ -2.21
CCNT1-205ENST00000618666 HMCN1Q96RW7 5635 aa1.21□□□□□ -2.22
CCNT1-205ENST00000618666 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
CCNT1-205ENST00000618666 KRTAP5-4Q6L8H1 288 aa1.05□□□□□ -2.24
CCNT1-205ENST00000618666 MUC5ACP98088 5654 aa1.04□□□□□ -2.24
CCNT1-205ENST00000618666 KRTAP5-8O75690 187 aa0.93□□□□□ -2.26
CCNT1-205ENST00000618666 KRTAP5-7Q6L8G8 165 aa0.93□□□□□ -2.26
CCNT1-205ENST00000618666 KRTAP5-1Q6L8H4 278 aa0.91□□□□□ -2.26
CCNT1-205ENST00000618666 KRTAP5-11Q6L8G4 156 aa0.85□□□□□ -2.27
CCNT1-205ENST00000618666 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
CCNT1-205ENST00000618666 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
CCNT1-205ENST00000618666 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
CCNT1-205ENST00000618666 KRTAP21-2Q3LI59 83 aa0.68□□□□□ -2.3
CCNT1-205ENST00000618666 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 16.9 ms