RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 POLR2KP53803 58 aaKnown RBP1.24□□□□□ -2.21
USP44-208ENST00000552440 DEFB131AP59861 70 aa1.24□□□□□ -2.21
USP44-208ENST00000552440 S4R3F8 94 aa1.24□□□□□ -2.21
USP44-208ENST00000552440 IGLV5-48A0A075B6I7 105 aa1.23□□□□□ -2.21
USP44-208ENST00000552440 KRTAP20-1Q3LI63 56 aa1.23□□□□□ -2.21
USP44-208ENST00000552440 RPL39P62891 51 aaKnown RBP1.22□□□□□ -2.21
USP44-208ENST00000552440 RHPN1-AS1Q9BWJ2 59 aa1.22□□□□□ -2.21
USP44-208ENST00000552440 MUC12Q9UKN1 5478 aa1.21□□□□□ -2.22
USP44-208ENST00000552440 APELAP0DMC3 54 aa1.21□□□□□ -2.22
USP44-208ENST00000552440 PRLHP81277 87 aa1.21□□□□□ -2.22
USP44-208ENST00000552440 KRTAP4-1Q9BYQ7 146 aa1.21□□□□□ -2.22
USP44-208ENST00000552440 MUC17Q685J3 4493 aa1.2□□□□□ -2.22
USP44-208ENST00000552440 A0A096LPF7 62 aa1.2□□□□□ -2.22
USP44-208ENST00000552440 SPINK6Q6UWN8 80 aa1.2□□□□□ -2.22
USP44-208ENST00000552440 RPL39LQ96EH5 51 aaKnown RBP1.2□□□□□ -2.22
USP44-208ENST00000552440 RPL39P5Q59GN2 51 aa1.19□□□□□ -2.22
USP44-208ENST00000552440 KMT2DO14686 5537 aa1.19□□□□□ -2.22
USP44-208ENST00000552440 MMP24-AS1A0A0U1RRL7 71 aa1.18□□□□□ -2.22
USP44-208ENST00000552440 MT1HP80294 61 aa1.18□□□□□ -2.22
USP44-208ENST00000552440 LINC01556Q5JQF7 62 aa1.17□□□□□ -2.22
USP44-208ENST00000552440 TMEM167AQ8TBQ9 72 aa1.17□□□□□ -2.22
USP44-208ENST00000552440 AHNAK2Q8IVF2 5795 aa1.16□□□□□ -2.22
USP44-208ENST00000552440 A8MTW9 85 aa1.16□□□□□ -2.22
USP44-208ENST00000552440 KRTAP2-3P0C7H8 128 aa1.16□□□□□ -2.22
USP44-208ENST00000552440 KRTAP2-4Q9BYR9 128 aa1.16□□□□□ -2.22
USP44-208ENST00000552440 NOP10Q9NPE3 64 aaKnown RBP1.16□□□□□ -2.22
USP44-208ENST00000552440 MDN1Q9NU22 5596 aa1.15□□□□□ -2.22
USP44-208ENST00000552440 K7EIM0 57 aa1.15□□□□□ -2.22
USP44-208ENST00000552440 PRCDQ00LT1 54 aa1.15□□□□□ -2.23
USP44-208ENST00000552440 KRTAP19-2Q3LHN2 52 aa1.15□□□□□ -2.23
USP44-208ENST00000552440 M0QY20 66 aa1.13□□□□□ -2.23
USP44-208ENST00000552440 M0R2T5 61 aa1.12□□□□□ -2.23
USP44-208ENST00000552440 HTN1P15515 57 aa1.12□□□□□ -2.23
USP44-208ENST00000552440 DEFB1P60022 68 aa1.12□□□□□ -2.23
USP44-208ENST00000552440 KRTAP19-6Q3LI70 58 aa1.12□□□□□ -2.23
USP44-208ENST00000552440 KRTAP2-1Q9BYU5 128 aa1.11□□□□□ -2.23
USP44-208ENST00000552440 FLGP20930 4061 aaPredicted RBP1.1□□□□□ -2.23
USP44-208ENST00000552440 CLPSL2Q6UWE3 100 aa1.08□□□□□ -2.24
USP44-208ENST00000552440 TOMM7Q9P0U1 55 aa1.07□□□□□ -2.24
USP44-208ENST00000552440 DSTQ03001 7570 aaKnown RBP1.05□□□□□ -2.24
USP44-208ENST00000552440 A0A096LNI7 61 aa1.04□□□□□ -2.24
USP44-208ENST00000552440 SPINK1P00995 79 aa1.04□□□□□ -2.24
USP44-208ENST00000552440 KRTAP19-3Q7Z4W3 81 aa1.03□□□□□ -2.24
USP44-208ENST00000552440 MT2AP02795 61 aa1.03□□□□□ -2.25
USP44-208ENST00000552440 MT1FP04733 61 aa1.01□□□□□ -2.25
USP44-208ENST00000552440 SPRR2EP22531 72 aa0.99□□□□□ -2.25
USP44-208ENST00000552440 SPRR2BP35325 72 aa0.99□□□□□ -2.25
USP44-208ENST00000552440 SPRR2AP35326 72 aa0.99□□□□□ -2.25
USP44-208ENST00000552440 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
USP44-208ENST00000552440 MUC5ACP98088 5654 aa0.97□□□□□ -2.25
USP44-208ENST00000552440 RPS29P62273 56 aaKnown RBP0.97□□□□□ -2.25
USP44-208ENST00000552440 SPRR2DP22532 72 aa0.96□□□□□ -2.26
USP44-208ENST00000552440 SPRR2FQ96RM1 72 aa0.95□□□□□ -2.26
USP44-208ENST00000552440 M0QZ58 72 aa0.94□□□□□ -2.26
USP44-208ENST00000552440 PRM1P04553 51 aa0.94□□□□□ -2.26
USP44-208ENST00000552440 C9orf92A6NGG3 77 aa0.91□□□□□ -2.26
USP44-208ENST00000552440 MT1BP07438 61 aa0.87□□□□□ -2.27
USP44-208ENST00000552440 KRTAP8-1Q8IUC2 63 aa0.87□□□□□ -2.27
USP44-208ENST00000552440 TNP1P09430 55 aa0.85□□□□□ -2.27
USP44-208ENST00000552440 MT4P47944 62 aa0.85□□□□□ -2.27
USP44-208ENST00000552440 KRTAP19-8Q3LI54 63 aa0.85□□□□□ -2.27
USP44-208ENST00000552440 SPRR2GQ9BYE4 73 aa0.82□□□□□ -2.28
USP44-208ENST00000552440 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
USP44-208ENST00000552440 MT1XP80297 61 aa0.76□□□□□ -2.29
USP44-208ENST00000552440 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
USP44-208ENST00000552440 SYNE1Q8NF91 8797 aaKnown RBP0.74□□□□□ -2.29
USP44-208ENST00000552440 MT1GP13640 62 aa0.72□□□□□ -2.29
USP44-208ENST00000552440 KRTAP19-7Q3SYF9 63 aa0.69□□□□□ -2.3
USP44-208ENST00000552440 MT1EP04732 61 aa0.68□□□□□ -2.3
USP44-208ENST00000552440 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
USP44-208ENST00000552440 MT1MQ8N339 61 aa0.67□□□□□ -2.3
USP44-208ENST00000552440 MT1AP04731 61 aa0.63□□□□□ -2.31
USP44-208ENST00000552440 KRTAP6-2Q3LI66 62 aa0.63□□□□□ -2.31
USP44-208ENST00000552440 MT1LQ93083 61 aa0.61□□□□□ -2.31
USP44-208ENST00000552440 KRTAP19-5Q3LI72 72 aa0.59□□□□□ -2.32
USP44-208ENST00000552440 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
USP44-208ENST00000552440 KRTAP6-1Q3LI64 71 aa0.52□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 68.7 ms