RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 UQCR11O14957 56 aa1.5□□□□□ -2.17
SNHG1-203ENST00000537024 POLR2KP53803 58 aaKnown RBP1.5□□□□□ -2.17
SNHG1-203ENST00000537024 SPINK7P58062 85 aa1.5□□□□□ -2.17
SNHG1-203ENST00000537024 IFI27P40305 119 aaPredicted RBP1.49□□□□□ -2.17
SNHG1-203ENST00000537024 BAGE3Q86Y29 109 aa1.49□□□□□ -2.17
SNHG1-203ENST00000537024 CNFNQ9BYD5 112 aa1.49□□□□□ -2.17
SNHG1-203ENST00000537024 GNG13Q9P2W3 67 aa1.49□□□□□ -2.17
SNHG1-203ENST00000537024 TRBV7-4A0A0J9YYF1 115 aa1.48□□□□□ -2.17
SNHG1-203ENST00000537024 ETDCA0A1B0GVM5 59 aa1.48□□□□□ -2.17
SNHG1-203ENST00000537024 FCER1GP30273 86 aa1.48□□□□□ -2.17
SNHG1-203ENST00000537024 LINC00472Q9H8W2 130 aa1.48□□□□□ -2.17
SNHG1-203ENST00000537024 ACYP2P14621 99 aa1.47□□□□□ -2.17
SNHG1-203ENST00000537024 RPL39P62891 51 aaKnown RBP1.47□□□□□ -2.17
SNHG1-203ENST00000537024 ATP5EP2Q5VTU8 51 aa1.47□□□□□ -2.17
SNHG1-203ENST00000537024 H0Y9P7 68 aa1.45□□□□□ -2.18
SNHG1-203ENST00000537024 MT1XP80297 61 aa1.45□□□□□ -2.18
SNHG1-203ENST00000537024 Q6ZQY7 126 aa1.45□□□□□ -2.18
SNHG1-203ENST00000537024 KCNQ1DNQ9H478 68 aa1.45□□□□□ -2.18
SNHG1-203ENST00000537024 A0A1B0GUT8 65 aa1.44□□□□□ -2.18
SNHG1-203ENST00000537024 SPRR1BP22528 89 aa1.44□□□□□ -2.18
SNHG1-203ENST00000537024 ATXN8Q156A1 80 aa1.44□□□□□ -2.18
SNHG1-203ENST00000537024 KRTAP20-2Q3LI61 65 aa1.44□□□□□ -2.18
SNHG1-203ENST00000537024 SPATA8Q6RVD6 105 aa1.44□□□□□ -2.18
SNHG1-203ENST00000537024 Q6ZRX8 168 aa1.44□□□□□ -2.18
SNHG1-203ENST00000537024 TOMM5Q8N4H5 51 aa1.44□□□□□ -2.18
SNHG1-203ENST00000537024 COX17Q14061 63 aa1.42□□□□□ -2.18
SNHG1-203ENST00000537024 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
SNHG1-203ENST00000537024 CDKN2A-AS1Q9UH64 79 aa1.42□□□□□ -2.18
SNHG1-203ENST00000537024 LINC01549A6NIU2 74 aa1.41□□□□□ -2.18
SNHG1-203ENST00000537024 NREPQ16612 68 aa1.41□□□□□ -2.18
SNHG1-203ENST00000537024 NCR3O14931 201 aa1.4□□□□□ -2.19
SNHG1-203ENST00000537024 SERF2P84101 59 aa1.39□□□□□ -2.19
SNHG1-203ENST00000537024 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
SNHG1-203ENST00000537024 A0A1B0GU69 56 aa1.38□□□□□ -2.19
SNHG1-203ENST00000537024 PLAC4Q8WY50 150 aa1.38□□□□□ -2.19
SNHG1-203ENST00000537024 SMIM2Q9BVW6 85 aa1.38□□□□□ -2.19
SNHG1-203ENST00000537024 K7EMI3 77 aa1.37□□□□□ -2.19
SNHG1-203ENST00000537024 WFDC13Q8IUB5 93 aa1.37□□□□□ -2.19
SNHG1-203ENST00000537024 SMIM11BQ8TCY0 68 aa1.37□□□□□ -2.19
SNHG1-203ENST00000537024 NDUFB1O75438 58 aa1.36□□□□□ -2.19
SNHG1-203ENST00000537024 H1FX-AS1Q4G0G2 97 aa1.35□□□□□ -2.19
SNHG1-203ENST00000537024 IGIPA6NJ69 53 aa1.34□□□□□ -2.19
SNHG1-203ENST00000537024 COX7BP24311 80 aa1.32□□□□□ -2.2
SNHG1-203ENST00000537024 LINC00158P58513 81 aa1.32□□□□□ -2.2
SNHG1-203ENST00000537024 MT1EP04732 61 aa1.31□□□□□ -2.2
SNHG1-203ENST00000537024 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
SNHG1-203ENST00000537024 LINC00575Q6W349 94 aa1.31□□□□□ -2.2
SNHG1-203ENST00000537024 DEFB105AQ8NG35 78 aa1.31□□□□□ -2.2
SNHG1-203ENST00000537024 CRIPTQ9P021 101 aa1.31□□□□□ -2.2
SNHG1-203ENST00000537024 IGLV5-48A0A075B6I7 105 aa1.3□□□□□ -2.2
SNHG1-203ENST00000537024 H0YAA0 97 aa1.3□□□□□ -2.2
SNHG1-203ENST00000537024 UBL5Q9BZL1 73 aa1.3□□□□□ -2.2
SNHG1-203ENST00000537024 MT1GP13640 62 aa1.28□□□□□ -2.2
SNHG1-203ENST00000537024 MT1MQ8N339 61 aa1.28□□□□□ -2.2
SNHG1-203ENST00000537024 SYNE1Q8NF91 8797 aaKnown RBP1.22□□□□□ -2.21
SNHG1-203ENST00000537024 TP53AIP1Q9HCN2 124 aa1.2□□□□□ -2.22
SNHG1-203ENST00000537024 S4R3F8 94 aa1.2□□□□□ -2.22
SNHG1-203ENST00000537024 SMIM27A0A1W2PRY6 76 aa1.19□□□□□ -2.22
SNHG1-203ENST00000537024 K7EQZ3 153 aa1.18□□□□□ -2.22
SNHG1-203ENST00000537024 PLNP26678 52 aa1.18□□□□□ -2.22
SNHG1-203ENST00000537024 C10orf95Q9H7T3 257 aa1.18□□□□□ -2.22
SNHG1-203ENST00000537024 MT1LQ93083 61 aa1.17□□□□□ -2.22
SNHG1-203ENST00000537024 MRPL34Q9BQ48 92 aaKnown RBP1.16□□□□□ -2.22
SNHG1-203ENST00000537024 LINC01546A6NGU7 62 aa1.15□□□□□ -2.23
SNHG1-203ENST00000537024 KRTAP19-5Q3LI72 72 aa1.14□□□□□ -2.23
SNHG1-203ENST00000537024 A0A0D9SG42 100 aa1.1□□□□□ -2.23
SNHG1-203ENST00000537024 LINC00308Q8TCZ7 52 aa1.1□□□□□ -2.23
SNHG1-203ENST00000537024 H0YGX0 51 aa1.09□□□□□ -2.23
SNHG1-203ENST00000537024 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
SNHG1-203ENST00000537024 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
SNHG1-203ENST00000537024 M0QZ58 72 aa1.04□□□□□ -2.24
SNHG1-203ENST00000537024 KRTAP6-1Q3LI64 71 aa1.02□□□□□ -2.25
SNHG1-203ENST00000537024 MT1AP04731 61 aa0.99□□□□□ -2.25
SNHG1-203ENST00000537024 MMP24-AS1A0A0U1RRL7 71 aa0.98□□□□□ -2.25
SNHG1-203ENST00000537024 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
SNHG1-203ENST00000537024 TNP1P09430 55 aa0.71□□□□□ -2.3
SNHG1-203ENST00000537024 PRM1P04553 51 aa0.7□□□□□ -2.3
SNHG1-203ENST00000537024 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 70 ms