RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 GVQW2A0A096LPI5 108 aaPredicted RBP1.77□□□□□ -2.13
PCM1-223ENST00000524356 Q6ZRX8 168 aa1.77□□□□□ -2.13
PCM1-223ENST00000524356 K7EQZ3 153 aa1.75□□□□□ -2.13
PCM1-223ENST00000524356 M0QY20 66 aa1.75□□□□□ -2.13
PCM1-223ENST00000524356 NEBP20929 6669 aa1.75□□□□□ -2.13
PCM1-223ENST00000524356 RPL37P61927 97 aaKnown RBP1.73□□□□□ -2.13
PCM1-223ENST00000524356 KMT2DO14686 5537 aa1.73□□□□□ -2.13
PCM1-223ENST00000524356 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
PCM1-223ENST00000524356 IGLV5-48A0A075B6I7 105 aa1.72□□□□□ -2.13
PCM1-223ENST00000524356 M0R2T5 61 aa1.72□□□□□ -2.13
PCM1-223ENST00000524356 SSBP3-AS1Q7Z2R9 100 aa1.72□□□□□ -2.13
PCM1-223ENST00000524356 TP53AIP1Q9HCN2 124 aa1.71□□□□□ -2.14
PCM1-223ENST00000524356 C6orf48Q9UBA6 75 aa1.71□□□□□ -2.14
PCM1-223ENST00000524356 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
PCM1-223ENST00000524356 KRTAP13-1Q8IUC0 172 aa1.7□□□□□ -2.14
PCM1-223ENST00000524356 KRTAP20-1Q3LI63 56 aa1.69□□□□□ -2.14
PCM1-223ENST00000524356 WFDC13Q8IUB5 93 aa1.69□□□□□ -2.14
PCM1-223ENST00000524356 MT2AP02795 61 aa1.68□□□□□ -2.14
PCM1-223ENST00000524356 MT1FP04733 61 aa1.68□□□□□ -2.14
PCM1-223ENST00000524356 KRTAP19-6Q3LI70 58 aa1.67□□□□□ -2.14
PCM1-223ENST00000524356 H0YAA0 97 aa1.66□□□□□ -2.14
PCM1-223ENST00000524356 PRLHP81277 87 aa1.65□□□□□ -2.15
PCM1-223ENST00000524356 CRIPTQ9P021 101 aa1.65□□□□□ -2.15
PCM1-223ENST00000524356 MMP24-AS1A0A0U1RRL7 71 aa1.64□□□□□ -2.15
PCM1-223ENST00000524356 C9orf92A6NGG3 77 aa1.64□□□□□ -2.15
PCM1-223ENST00000524356 COX6B2Q6YFQ2 88 aa1.64□□□□□ -2.15
PCM1-223ENST00000524356 TOMM7Q9P0U1 55 aa1.64□□□□□ -2.15
PCM1-223ENST00000524356 MDN1Q9NU22 5596 aa1.64□□□□□ -2.15
PCM1-223ENST00000524356 MRPL34Q9BQ48 92 aaKnown RBP1.62□□□□□ -2.15
PCM1-223ENST00000524356 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
PCM1-223ENST00000524356 SPINK1P00995 79 aa1.6□□□□□ -2.15
PCM1-223ENST00000524356 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
PCM1-223ENST00000524356 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
PCM1-223ENST00000524356 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
PCM1-223ENST00000524356 H1FX-AS1Q4G0G2 97 aa1.58□□□□□ -2.16
PCM1-223ENST00000524356 C10orf95Q9H7T3 257 aa1.58□□□□□ -2.16
PCM1-223ENST00000524356 RPS29P62273 56 aaKnown RBP1.55□□□□□ -2.16
PCM1-223ENST00000524356 KRTAP2-1Q9BYU5 128 aa1.54□□□□□ -2.16
PCM1-223ENST00000524356 SPRR1AP35321 89 aa1.53□□□□□ -2.16
PCM1-223ENST00000524356 DEFB105AQ8NG35 78 aa1.53□□□□□ -2.16
PCM1-223ENST00000524356 MT1BP07438 61 aa1.49□□□□□ -2.17
PCM1-223ENST00000524356 SPRR1BP22528 89 aa1.48□□□□□ -2.17
PCM1-223ENST00000524356 SPRR2EP22531 72 aa1.48□□□□□ -2.17
PCM1-223ENST00000524356 SPRR2BP35325 72 aa1.48□□□□□ -2.17
PCM1-223ENST00000524356 SPRR2AP35326 72 aa1.48□□□□□ -2.17
PCM1-223ENST00000524356 DSTQ03001 7570 aaKnown RBP1.46□□□□□ -2.18
PCM1-223ENST00000524356 SPRR2FQ96RM1 72 aa1.45□□□□□ -2.18
PCM1-223ENST00000524356 S4R3F8 94 aa1.45□□□□□ -2.18
PCM1-223ENST00000524356 A0A0D9SG42 100 aa1.42□□□□□ -2.18
PCM1-223ENST00000524356 SPRR2DP22532 72 aa1.42□□□□□ -2.18
PCM1-223ENST00000524356 KRTAP19-8Q3LI54 63 aa1.4□□□□□ -2.19
PCM1-223ENST00000524356 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
PCM1-223ENST00000524356 KRTAP5-10Q6L8G5 202 aa1.37□□□□□ -2.19
PCM1-223ENST00000524356 KRTAP8-1Q8IUC2 63 aa1.36□□□□□ -2.19
PCM1-223ENST00000524356 SPRR2GQ9BYE4 73 aa1.36□□□□□ -2.19
PCM1-223ENST00000524356 MT1XP80297 61 aa1.33□□□□□ -2.2
PCM1-223ENST00000524356 MT4P47944 62 aa1.31□□□□□ -2.2
PCM1-223ENST00000524356 M0QZ58 72 aa1.28□□□□□ -2.2
PCM1-223ENST00000524356 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
PCM1-223ENST00000524356 KRTAP19-7Q3SYF9 63 aa1.2□□□□□ -2.22
PCM1-223ENST00000524356 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
PCM1-223ENST00000524356 KRTAP19-3Q7Z4W3 81 aa1.18□□□□□ -2.22
PCM1-223ENST00000524356 MT1EP04732 61 aa1.17□□□□□ -2.22
PCM1-223ENST00000524356 MUC5BQ9HC84 5762 aaPredicted RBP1.17□□□□□ -2.22
PCM1-223ENST00000524356 KRTAP20-2Q3LI61 65 aa1.16□□□□□ -2.22
PCM1-223ENST00000524356 TNP1P09430 55 aa1.14□□□□□ -2.23
PCM1-223ENST00000524356 MT1MQ8N339 61 aa1.13□□□□□ -2.23
PCM1-223ENST00000524356 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
PCM1-223ENST00000524356 MT1GP13640 62 aa1.12□□□□□ -2.23
PCM1-223ENST00000524356 KRTAP19-5Q3LI72 72 aa1.1□□□□□ -2.23
PCM1-223ENST00000524356 MT1LQ93083 61 aa1.09□□□□□ -2.23
PCM1-223ENST00000524356 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
PCM1-223ENST00000524356 KRTAP6-1Q3LI64 71 aa0.96□□□□□ -2.26
PCM1-223ENST00000524356 KRTAP6-2Q3LI66 62 aa0.95□□□□□ -2.26
PCM1-223ENST00000524356 PRM1P04553 51 aa0.92□□□□□ -2.26
PCM1-223ENST00000524356 MT1AP04731 61 aa0.89□□□□□ -2.27
PCM1-223ENST00000524356 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
PCM1-223ENST00000524356 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 105.3 ms