RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 A0A096LNI7 61 aa1.26□□□□□ -2.21
SMC6-208ENST00000481708 UQCR11O14957 56 aa1.26□□□□□ -2.21
SMC6-208ENST00000481708 KRTAP5-5Q701N2 237 aaPredicted RBP1.26□□□□□ -2.21
SMC6-208ENST00000481708 LINC00846Q9NV44 126 aa1.26□□□□□ -2.21
SMC6-208ENST00000481708 ACYP2P14621 99 aa1.25□□□□□ -2.21
SMC6-208ENST00000481708 SMIM11BQ8TCY0 68 aa1.25□□□□□ -2.21
SMC6-208ENST00000481708 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
SMC6-208ENST00000481708 IGLV5-48A0A075B6I7 105 aa1.25□□□□□ -2.21
SMC6-208ENST00000481708 LINC00158P58513 81 aa1.25□□□□□ -2.21
SMC6-208ENST00000481708 ATXN8Q156A1 80 aa1.25□□□□□ -2.21
SMC6-208ENST00000481708 SPATA8Q6RVD6 105 aa1.25□□□□□ -2.21
SMC6-208ENST00000481708 LINC00575Q6W349 94 aa1.25□□□□□ -2.21
SMC6-208ENST00000481708 ACYP1P07311 99 aa1.24□□□□□ -2.21
SMC6-208ENST00000481708 Q6ZRX8 168 aa1.24□□□□□ -2.21
SMC6-208ENST00000481708 TOMM7Q9P0U1 55 aa1.24□□□□□ -2.21
SMC6-208ENST00000481708 RPL37P61927 97 aaKnown RBP1.23□□□□□ -2.21
SMC6-208ENST00000481708 COX7BP24311 80 aa1.22□□□□□ -2.21
SMC6-208ENST00000481708 NCR3O14931 201 aa1.22□□□□□ -2.21
SMC6-208ENST00000481708 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
SMC6-208ENST00000481708 Q6JHZ5 121 aa1.21□□□□□ -2.22
SMC6-208ENST00000481708 KRTAP4-3Q9BYR4 195 aa1.21□□□□□ -2.22
SMC6-208ENST00000481708 C10orf95Q9H7T3 257 aa1.21□□□□□ -2.22
SMC6-208ENST00000481708 KRTAP12-3P60328 96 aa1.2□□□□□ -2.22
SMC6-208ENST00000481708 SPINK1P00995 79 aa1.19□□□□□ -2.22
SMC6-208ENST00000481708 H0Y9P7 68 aa1.19□□□□□ -2.22
SMC6-208ENST00000481708 AHNAK2Q8IVF2 5795 aa1.18□□□□□ -2.22
SMC6-208ENST00000481708 ETDCA0A1B0GVM5 59 aa1.18□□□□□ -2.22
SMC6-208ENST00000481708 CRIPTQ9P021 101 aa1.18□□□□□ -2.22
SMC6-208ENST00000481708 MDN1Q9NU22 5596 aa1.18□□□□□ -2.22
SMC6-208ENST00000481708 ATP5EP2Q5VTU8 51 aa1.18□□□□□ -2.22
SMC6-208ENST00000481708 SSBP3-AS1Q7Z2R9 100 aa1.18□□□□□ -2.22
SMC6-208ENST00000481708 C9orf92A6NGG3 77 aa1.17□□□□□ -2.22
SMC6-208ENST00000481708 PRLHP81277 87 aa1.16□□□□□ -2.22
SMC6-208ENST00000481708 UBL5Q9BZL1 73 aa1.14□□□□□ -2.23
SMC6-208ENST00000481708 DEFB105AQ8NG35 78 aa1.13□□□□□ -2.23
SMC6-208ENST00000481708 MT1XP80297 61 aa1.12□□□□□ -2.23
SMC6-208ENST00000481708 NREPQ16612 68 aa1.12□□□□□ -2.23
SMC6-208ENST00000481708 MMP24-AS1A0A0U1RRL7 71 aa1.12□□□□□ -2.23
SMC6-208ENST00000481708 A0A1B0GU69 56 aa1.12□□□□□ -2.23
SMC6-208ENST00000481708 LCE1CQ5T751 118 aa1.12□□□□□ -2.23
SMC6-208ENST00000481708 LCE1BQ5T7P3 118 aa1.12□□□□□ -2.23
SMC6-208ENST00000481708 H0YAA0 97 aa1.11□□□□□ -2.23
SMC6-208ENST00000481708 K7EQZ3 153 aa1.11□□□□□ -2.23
SMC6-208ENST00000481708 TP53AIP1Q9HCN2 124 aa1.1□□□□□ -2.23
SMC6-208ENST00000481708 MRPL34Q9BQ48 92 aaKnown RBP1.09□□□□□ -2.24
SMC6-208ENST00000481708 NDUFB1O75438 58 aa1.08□□□□□ -2.24
SMC6-208ENST00000481708 A0A0D9SG42 100 aa1.06□□□□□ -2.24
SMC6-208ENST00000481708 WFDC13Q8IUB5 93 aa1.06□□□□□ -2.24
SMC6-208ENST00000481708 SPRR2EP22531 72 aa1.06□□□□□ -2.24
SMC6-208ENST00000481708 SPRR2BP35325 72 aa1.06□□□□□ -2.24
SMC6-208ENST00000481708 SPRR2AP35326 72 aa1.06□□□□□ -2.24
SMC6-208ENST00000481708 KRTAP19-7Q3SYF9 63 aa1.05□□□□□ -2.24
SMC6-208ENST00000481708 SPRR2FQ96RM1 72 aa1.05□□□□□ -2.24
SMC6-208ENST00000481708 MUC5ACP98088 5654 aa1.04□□□□□ -2.24
SMC6-208ENST00000481708 SPRR2DP22532 72 aa1.02□□□□□ -2.25
SMC6-208ENST00000481708 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
SMC6-208ENST00000481708 MUC19Q7Z5P9 8384 aa1.01□□□□□ -2.25
SMC6-208ENST00000481708 MT1EP04732 61 aa1□□□□□ -2.25
SMC6-208ENST00000481708 H1FX-AS1Q4G0G2 97 aa0.98□□□□□ -2.25
SMC6-208ENST00000481708 KRTAP19-3Q7Z4W3 81 aa0.98□□□□□ -2.25
SMC6-208ENST00000481708 KRTAP8-1Q8IUC2 63 aa0.97□□□□□ -2.25
SMC6-208ENST00000481708 MT1MQ8N339 61 aa0.95□□□□□ -2.26
SMC6-208ENST00000481708 S4R3F8 94 aa0.95□□□□□ -2.26
SMC6-208ENST00000481708 MT4P47944 62 aa0.94□□□□□ -2.26
SMC6-208ENST00000481708 MT1GP13640 62 aa0.93□□□□□ -2.26
SMC6-208ENST00000481708 M0QZ58 72 aa0.91□□□□□ -2.26
SMC6-208ENST00000481708 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
SMC6-208ENST00000481708 MT1LQ93083 61 aa0.9□□□□□ -2.26
SMC6-208ENST00000481708 KRTAP21-2Q3LI59 83 aa0.81□□□□□ -2.28
SMC6-208ENST00000481708 MT1AP04731 61 aa0.8□□□□□ -2.28
SMC6-208ENST00000481708 KRTAP19-5Q3LI72 72 aa0.79□□□□□ -2.28
SMC6-208ENST00000481708 TNP1P09430 55 aa0.77□□□□□ -2.29
SMC6-208ENST00000481708 KRTAP6-1Q3LI64 71 aa0.7□□□□□ -2.3
SMC6-208ENST00000481708 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
SMC6-208ENST00000481708 PRM1P04553 51 aa0.62□□□□□ -2.31
SMC6-208ENST00000481708 KRTAP6-2Q3LI66 62 aa0.62□□□□□ -2.31
SMC6-208ENST00000481708 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
SMC6-208ENST00000481708 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 88.5 ms