RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 MT1HP80294 61 aa1.29□□□□□ -2.2
LINC00407-201ENST00000426509 M0QZ58 72 aa1.28□□□□□ -2.2
LINC00407-201ENST00000426509 CRIPTQ9P021 101 aa1.28□□□□□ -2.2
LINC00407-201ENST00000426509 NEBP20929 6669 aa1.27□□□□□ -2.21
LINC00407-201ENST00000426509 KRTAP20-1Q3LI63 56 aa1.27□□□□□ -2.21
LINC00407-201ENST00000426509 KRTAP6-3Q3LI67 103 aa1.26□□□□□ -2.21
LINC00407-201ENST00000426509 SPINT4Q6UDR6 99 aa1.26□□□□□ -2.21
LINC00407-201ENST00000426509 C10orf95Q9H7T3 257 aa1.26□□□□□ -2.21
LINC00407-201ENST00000426509 OBSCNQ5VST9 7968 aa1.26□□□□□ -2.21
LINC00407-201ENST00000426509 LCE3EQ5T5B0 92 aa1.25□□□□□ -2.21
LINC00407-201ENST00000426509 MUC12Q9UKN1 5478 aa1.23□□□□□ -2.21
LINC00407-201ENST00000426509 R4GN34 69 aa1.23□□□□□ -2.21
LINC00407-201ENST00000426509 FLGP20930 4061 aaPredicted RBP1.21□□□□□ -2.22
LINC00407-201ENST00000426509 KMT2DO14686 5537 aa1.19□□□□□ -2.22
LINC00407-201ENST00000426509 GPR98Q8WXG9 6306 aa1.19□□□□□ -2.22
LINC00407-201ENST00000426509 KRTAP19-6Q3LI70 58 aa1.18□□□□□ -2.22
LINC00407-201ENST00000426509 M0R2T5 61 aa1.17□□□□□ -2.22
LINC00407-201ENST00000426509 KRTAP2-3P0C7H8 128 aa1.17□□□□□ -2.22
LINC00407-201ENST00000426509 SPRR2GQ9BYE4 73 aa1.17□□□□□ -2.22
LINC00407-201ENST00000426509 KRTAP2-4Q9BYR9 128 aa1.17□□□□□ -2.22
LINC00407-201ENST00000426509 KRTAP5-8O75690 187 aa1.16□□□□□ -2.22
LINC00407-201ENST00000426509 MT2AP02795 61 aa1.16□□□□□ -2.22
LINC00407-201ENST00000426509 MT1FP04733 61 aa1.16□□□□□ -2.22
LINC00407-201ENST00000426509 LCE3AQ5TA76 89 aa1.16□□□□□ -2.22
LINC00407-201ENST00000426509 CAMK2N1Q7Z7J9 78 aa1.16□□□□□ -2.22
LINC00407-201ENST00000426509 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
LINC00407-201ENST00000426509 PP632Q6XCG6 107 aa1.15□□□□□ -2.23
LINC00407-201ENST00000426509 KRTAP19-8Q3LI54 63 aa1.14□□□□□ -2.23
LINC00407-201ENST00000426509 MT1BP07438 61 aa1.13□□□□□ -2.23
LINC00407-201ENST00000426509 TNP1P09430 55 aa1.13□□□□□ -2.23
LINC00407-201ENST00000426509 PLAC4Q8WY50 150 aa1.13□□□□□ -2.23
LINC00407-201ENST00000426509 KRTAP10-10P60014 251 aa1.12□□□□□ -2.23
LINC00407-201ENST00000426509 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
LINC00407-201ENST00000426509 MT1XP80297 61 aa1.11□□□□□ -2.23
LINC00407-201ENST00000426509 KRTAP5-5Q701N2 237 aaPredicted RBP1.11□□□□□ -2.23
LINC00407-201ENST00000426509 SPRR5A0A1B0GTR4 108 aa1.1□□□□□ -2.23
LINC00407-201ENST00000426509 KRTAP8-1Q8IUC2 63 aa1.08□□□□□ -2.24
LINC00407-201ENST00000426509 SPRR2EP22531 72 aa1.07□□□□□ -2.24
LINC00407-201ENST00000426509 SPRR2BP35325 72 aa1.07□□□□□ -2.24
LINC00407-201ENST00000426509 SPRR2AP35326 72 aa1.07□□□□□ -2.24
LINC00407-201ENST00000426509 KRTAP12-3P60328 96 aa1.04□□□□□ -2.24
LINC00407-201ENST00000426509 LUZP6Q538Z0 58 aa1.04□□□□□ -2.24
LINC00407-201ENST00000426509 LCE1CQ5T751 118 aa1.03□□□□□ -2.24
LINC00407-201ENST00000426509 LCE1BQ5T7P3 118 aa1.03□□□□□ -2.24
LINC00407-201ENST00000426509 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
LINC00407-201ENST00000426509 LCE3DQ9BYE3 92 aa1.03□□□□□ -2.24
LINC00407-201ENST00000426509 AHNAK2Q8IVF2 5795 aa1.03□□□□□ -2.24
LINC00407-201ENST00000426509 SPRR2DP22532 72 aa1.02□□□□□ -2.25
LINC00407-201ENST00000426509 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
LINC00407-201ENST00000426509 SPRR2FQ96RM1 72 aa1.02□□□□□ -2.25
LINC00407-201ENST00000426509 PRO2289Q9P1D8 64 aa1.02□□□□□ -2.25
LINC00407-201ENST00000426509 DSTQ03001 7570 aaKnown RBP1□□□□□ -2.25
LINC00407-201ENST00000426509 KRTAP5-7Q6L8G8 165 aa1□□□□□ -2.25
LINC00407-201ENST00000426509 KRTAP19-7Q3SYF9 63 aa0.99□□□□□ -2.25
LINC00407-201ENST00000426509 HMCN1Q96RW7 5635 aa0.98□□□□□ -2.25
LINC00407-201ENST00000426509 MT1EP04732 61 aa0.96□□□□□ -2.26
LINC00407-201ENST00000426509 MT1LQ93083 61 aa0.96□□□□□ -2.26
LINC00407-201ENST00000426509 MT4P47944 62 aa0.94□□□□□ -2.26
LINC00407-201ENST00000426509 INE1O15225 51 aa0.91□□□□□ -2.26
LINC00407-201ENST00000426509 MT1MQ8N339 61 aa0.9□□□□□ -2.27
LINC00407-201ENST00000426509 MUC5BQ9HC84 5762 aaPredicted RBP0.89□□□□□ -2.27
LINC00407-201ENST00000426509 KRTAP19-3Q7Z4W3 81 aa0.89□□□□□ -2.27
LINC00407-201ENST00000426509 MT1GP13640 62 aa0.88□□□□□ -2.27
LINC00407-201ENST00000426509 AHNAKQ09666 5890 aaKnown RBP0.87□□□□□ -2.27
LINC00407-201ENST00000426509 MUC5ACP98088 5654 aa0.86□□□□□ -2.27
LINC00407-201ENST00000426509 MUC19Q7Z5P9 8384 aa0.85□□□□□ -2.27
LINC00407-201ENST00000426509 KRTAP20-2Q3LI61 65 aa0.82□□□□□ -2.28
LINC00407-201ENST00000426509 MT1AP04731 61 aa0.81□□□□□ -2.28
LINC00407-201ENST00000426509 KRTAP6-1Q3LI64 71 aa0.81□□□□□ -2.28
LINC00407-201ENST00000426509 KRTAP12-4P60329 112 aa0.77□□□□□ -2.29
LINC00407-201ENST00000426509 KRTAP21-2Q3LI59 83 aa0.74□□□□□ -2.29
LINC00407-201ENST00000426509 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
LINC00407-201ENST00000426509 KRTAP6-2Q3LI66 62 aa0.72□□□□□ -2.29
LINC00407-201ENST00000426509 PRM1P04553 51 aa0.7□□□□□ -2.3
LINC00407-201ENST00000426509 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
LINC00407-201ENST00000426509 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
LINC00407-201ENST00000426509 MUC16Q8WXI7 14507 aa0.37□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 108.5 ms