RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SPINK1P00995 79 aa0.73□□□□□ -2.29
SYNE2-210ENST00000553455 SPINK8P0C7L1 97 aa0.73□□□□□ -2.29
SYNE2-210ENST00000553455 C3orf79P0CE67 100 aa0.73□□□□□ -2.29
SYNE2-210ENST00000553455 TMEM170BQ5T4T1 132 aa0.73□□□□□ -2.29
SYNE2-210ENST00000553455 LINC00308Q8TCZ7 52 aa0.73□□□□□ -2.29
SYNE2-210ENST00000553455 SPANXDQ9BXN6 97 aa0.73□□□□□ -2.29
SYNE2-210ENST00000553455 SPANXCQ9NY87 97 aa0.73□□□□□ -2.29
SYNE2-210ENST00000553455 HIGD1BQ9P298 99 aa0.73□□□□□ -2.29
SYNE2-210ENST00000553455 NDUFA12Q9UI09 145 aa0.73□□□□□ -2.29
SYNE2-210ENST00000553455 IGLV5-48A0A075B6I7 105 aa0.72□□□□□ -2.29
SYNE2-210ENST00000553455 LOC101927531A0A1B0GV80 90 aa0.72□□□□□ -2.29
SYNE2-210ENST00000553455 C20orf202A1L168 122 aa0.72□□□□□ -2.29
SYNE2-210ENST00000553455 SMIM13P0DJ93 91 aa0.72□□□□□ -2.29
SYNE2-210ENST00000553455 LINC00158P58513 81 aa0.72□□□□□ -2.29
SYNE2-210ENST00000553455 PMCHL1Q16048 86 aa0.72□□□□□ -2.29
SYNE2-210ENST00000553455 PPDPFLQ8WWR9 84 aa0.72□□□□□ -2.29
SYNE2-210ENST00000553455 COPS9Q8WXC6 57 aa0.72□□□□□ -2.29
SYNE2-210ENST00000553455 SPRR4Q96PI1 79 aa0.72□□□□□ -2.29
SYNE2-210ENST00000553455 TOMM7Q9P0U1 55 aa0.72□□□□□ -2.29
SYNE2-210ENST00000553455 AHNAKQ09666 5890 aaKnown RBP0.71□□□□□ -2.3
SYNE2-210ENST00000553455 TRAV13-2A0A0B4J235 113 aa0.71□□□□□ -2.3
SYNE2-210ENST00000553455 TRBV10-3A0A0K0K1G6 114 aa0.71□□□□□ -2.3
SYNE2-210ENST00000553455 H0YGX0 51 aa0.71□□□□□ -2.3
SYNE2-210ENST00000553455 COX8AP10176 69 aa0.71□□□□□ -2.3
SYNE2-210ENST00000553455 ELOF1P60002 83 aaKnown RBP0.71□□□□□ -2.3
SYNE2-210ENST00000553455 HAMPP81172 84 aa0.71□□□□□ -2.3
SYNE2-210ENST00000553455 Q6ZRX8 168 aa0.71□□□□□ -2.3
SYNE2-210ENST00000553455 MUSTN1Q8IVN3 82 aa0.71□□□□□ -2.3
SYNE2-210ENST00000553455 TEX49A0A1B0GTD5 131 aa0.7□□□□□ -2.3
SYNE2-210ENST00000553455 ZNF815PA8K554 130 aa0.7□□□□□ -2.3
SYNE2-210ENST00000553455 S100A12P80511 92 aa0.7□□□□□ -2.3
SYNE2-210ENST00000553455 KRTAP19-2Q3LHN2 52 aa0.7□□□□□ -2.3
SYNE2-210ENST00000553455 PMCHL2Q9BQD1 86 aa0.7□□□□□ -2.3
SYNE2-210ENST00000553455 ETDCA0A1B0GVM5 59 aa0.69□□□□□ -2.3
SYNE2-210ENST00000553455 hADV29S1A0JD25 119 aa0.69□□□□□ -2.3
SYNE2-210ENST00000553455 COX7BP24311 80 aa0.69□□□□□ -2.3
SYNE2-210ENST00000553455 KRTDAPP60985 99 aa0.69□□□□□ -2.3
SYNE2-210ENST00000553455 PRLHP81277 87 aa0.69□□□□□ -2.3
SYNE2-210ENST00000553455 PYY3Q5JQD4 70 aa0.69□□□□□ -2.3
SYNE2-210ENST00000553455 S100A7L2Q5SY68 101 aa0.69□□□□□ -2.3
SYNE2-210ENST00000553455 BVES-AS1Q5T3Y7 98 aa0.69□□□□□ -2.3
SYNE2-210ENST00000553455 Q6JHZ5 121 aa0.69□□□□□ -2.3
SYNE2-210ENST00000553455 SMIM11BQ8TCY0 68 aa0.69□□□□□ -2.3
SYNE2-210ENST00000553455 PRO1933Q9H354 126 aa0.69□□□□□ -2.3
SYNE2-210ENST00000553455 PRO1854Q9UHT4 67 aa0.69□□□□□ -2.3
SYNE2-210ENST00000553455 TRBV7-4A0A0J9YYF1 115 aa0.68□□□□□ -2.3
SYNE2-210ENST00000553455 TRBV7-7A0A0K0K1E9 115 aa0.68□□□□□ -2.3
SYNE2-210ENST00000553455 C9JAW5 83 aa0.68□□□□□ -2.3
SYNE2-210ENST00000553455 SNCGO76070 127 aa0.68□□□□□ -2.3
SYNE2-210ENST00000553455 DMAC1Q96GE9 116 aa0.68□□□□□ -2.3
SYNE2-210ENST00000553455 Q96NJ1 140 aa0.68□□□□□ -2.3
SYNE2-210ENST00000553455 LINC00472Q9H8W2 130 aa0.68□□□□□ -2.3
SYNE2-210ENST00000553455 LOC105371267A0A1B0GV96 52 aa0.67□□□□□ -2.3
SYNE2-210ENST00000553455 HSD52Q0P140 79 aa0.67□□□□□ -2.3
SYNE2-210ENST00000553455 C14orf144Q96I85 54 aa0.67□□□□□ -2.3
SYNE2-210ENST00000553455 VAMP8Q9BV40 100 aa0.67□□□□□ -2.3
SYNE2-210ENST00000553455 UQCR10Q9UDW1 63 aa0.67□□□□□ -2.3
SYNE2-210ENST00000553455 MUC5BQ9HC84 5762 aaPredicted RBP0.67□□□□□ -2.3
SYNE2-210ENST00000553455 USH2AO75445 5202 aa0.66□□□□□ -2.3
SYNE2-210ENST00000553455 TRBV20-1A0A075B6N2 111 aa0.66□□□□□ -2.3
SYNE2-210ENST00000553455 COX6CP09669 75 aa0.66□□□□□ -2.3
SYNE2-210ENST00000553455 SMIM6P0DI80 62 aa0.66□□□□□ -2.3
SYNE2-210ENST00000553455 NPC2P61916 151 aa0.66□□□□□ -2.3
SYNE2-210ENST00000553455 RPL37P61927 97 aaKnown RBP0.66□□□□□ -2.3
SYNE2-210ENST00000553455 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
SYNE2-210ENST00000553455 C12orf57Q99622 126 aa0.66□□□□□ -2.3
SYNE2-210ENST00000553455 SNHG12Q9BXW3 62 aa0.66□□□□□ -2.3
SYNE2-210ENST00000553455 SPINK7P58062 85 aa0.65□□□□□ -2.31
SYNE2-210ENST00000553455 RBM3P98179 157 aaKnown RBP0.65□□□□□ -2.31
SYNE2-210ENST00000553455 DEFB105AQ8NG35 78 aa0.65□□□□□ -2.31
SYNE2-210ENST00000553455 SSPOA2VEC9 5147 aa0.65□□□□□ -2.31
SYNE2-210ENST00000553455 F8WEM9 126 aa0.64□□□□□ -2.31
SYNE2-210ENST00000553455 M0R143 59 aa0.64□□□□□ -2.31
SYNE2-210ENST00000553455 CCKP06307 115 aa0.64□□□□□ -2.31
SYNE2-210ENST00000553455 MT1HP80294 61 aa0.64□□□□□ -2.31
SYNE2-210ENST00000553455 ATXN8Q156A1 80 aa0.64□□□□□ -2.31
SYNE2-210ENST00000553455 C9orf153Q5TBE3 101 aa0.64□□□□□ -2.31
SYNE2-210ENST00000553455 ATP11AUNQ6ZP68 121 aa0.64□□□□□ -2.31
SYNE2-210ENST00000553455 WFDC13Q8IUB5 93 aa0.64□□□□□ -2.31
SYNE2-210ENST00000553455 DSCR8Q96T75 97 aa0.64□□□□□ -2.31
SYNE2-210ENST00000553455 H3BUT2 72 aa0.63□□□□□ -2.31
SYNE2-210ENST00000553455 KRTAP2-3P0C7H8 128 aa0.63□□□□□ -2.31
SYNE2-210ENST00000553455 KRTAP2-4Q9BYR9 128 aa0.63□□□□□ -2.31
SYNE2-210ENST00000553455 KRTAP2-1Q9BYU5 128 aa0.63□□□□□ -2.31
SYNE2-210ENST00000553455 C9orf92A6NGG3 77 aa0.62□□□□□ -2.31
SYNE2-210ENST00000553455 NDUFB1O75438 58 aa0.62□□□□□ -2.31
SYNE2-210ENST00000553455 ACYP1P07311 99 aa0.62□□□□□ -2.31
SYNE2-210ENST00000553455 NREPQ16612 68 aa0.62□□□□□ -2.31
SYNE2-210ENST00000553455 COL5A1-AS1Q5SY13 56 aa0.62□□□□□ -2.31
SYNE2-210ENST00000553455 MMP24-AS1A0A0U1RRL7 71 aa0.61□□□□□ -2.31
SYNE2-210ENST00000553455 K7EP34 96 aa0.61□□□□□ -2.31
SYNE2-210ENST00000553455 MT2AP02795 61 aa0.61□□□□□ -2.31
SYNE2-210ENST00000553455 SCGB1A1P11684 91 aa0.61□□□□□ -2.31
SYNE2-210ENST00000553455 MRPL34Q9BQ48 92 aaKnown RBP0.61□□□□□ -2.31
SYNE2-210ENST00000553455 TP53AIP1Q9HCN2 124 aa0.61□□□□□ -2.31
SYNE2-210ENST00000553455 LINC00846Q9NV44 126 aa0.61□□□□□ -2.31
SYNE2-210ENST00000553455 FSIP2Q5CZC0 6907 aa0.61□□□□□ -2.31
SYNE2-210ENST00000553455 H0YAA0 97 aa0.6□□□□□ -2.31
SYNE2-210ENST00000553455 KRTAP19-6Q3LI70 58 aa0.6□□□□□ -2.31
SYNE2-210ENST00000553455 H1FX-AS1Q4G0G2 97 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms