RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 IGFL1Q6UW32 110 aa2.51□□□□□ -2.01
CHD4-205ENST00000536301 H3BPC8 53 aa2.5□□□□□ -2.01
CHD4-205ENST00000536301 C1orf64Q8NEQ6 169 aa2.49□□□□□ -2.01
CHD4-205ENST00000536301 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
CHD4-205ENST00000536301 TRAV22A0A0B4J277 110 aa2.48□□□□□ -2.01
CHD4-205ENST00000536301 KRTAP2-3P0C7H8 128 aa2.48□□□□□ -2.01
CHD4-205ENST00000536301 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
CHD4-205ENST00000536301 DSCR10P59022 87 aa2.48□□□□□ -2.01
CHD4-205ENST00000536301 NOTCH2NLQ7Z3S9 236 aa2.48□□□□□ -2.01
CHD4-205ENST00000536301 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
CHD4-205ENST00000536301 KRTAP2-4Q9BYR9 128 aa2.48□□□□□ -2.01
CHD4-205ENST00000536301 HCG22E2RYF7 251 aa2.47□□□□□ -2.01
CHD4-205ENST00000536301 SPANXA2-OT1Q8N9U9 137 aa2.47□□□□□ -2.01
CHD4-205ENST00000536301 ZCCHC13Q8WW36 166 aaKnown RBP2.47□□□□□ -2.01
CHD4-205ENST00000536301 CHKB-CPT1BH3BT56 60 aa2.46□□□□□ -2.02
CHD4-205ENST00000536301 PSPHP1O15172 72 aa2.46□□□□□ -2.02
CHD4-205ENST00000536301 RBM12B-AS1Q9P1G2 102 aa2.46□□□□□ -2.02
CHD4-205ENST00000536301 LINC00208Q96KT6 92 aa2.45□□□□□ -2.02
CHD4-205ENST00000536301 A6NN06 94 aa2.44□□□□□ -2.02
CHD4-205ENST00000536301 Q8N9L7 120 aa2.44□□□□□ -2.02
CHD4-205ENST00000536301 A6NED7 52 aa2.43□□□□□ -2.02
CHD4-205ENST00000536301 A8MUN3 132 aa2.43□□□□□ -2.02
CHD4-205ENST00000536301 A8MWP4 228 aa2.43□□□□□ -2.02
CHD4-205ENST00000536301 MT1BP07438 61 aa2.43□□□□□ -2.02
CHD4-205ENST00000536301 Q5VV11 94 aa2.43□□□□□ -2.02
CHD4-205ENST00000536301 LOC101927531A0A1B0GV80 90 aa2.42□□□□□ -2.02
CHD4-205ENST00000536301 C7orf65Q6ZTY9 151 aa2.42□□□□□ -2.02
CHD4-205ENST00000536301 SPTSSBQ8NFR3 76 aa2.42□□□□□ -2.02
CHD4-205ENST00000536301 PRR15LQ9BU68 103 aa2.42□□□□□ -2.02
CHD4-205ENST00000536301 CDC42SE1Q9NRR8 79 aa2.42□□□□□ -2.02
CHD4-205ENST00000536301 A0A1W2PNM2 257 aa2.41□□□□□ -2.02
CHD4-205ENST00000536301 LCA10Q71F78 164 aa2.41□□□□□ -2.02
CHD4-205ENST00000536301 H0Y9P7 68 aa2.4□□□□□ -2.03
CHD4-205ENST00000536301 K7EQZ3 153 aa2.4□□□□□ -2.03
CHD4-205ENST00000536301 TP53AIP1Q9HCN2 124 aa2.4□□□□□ -2.03
CHD4-205ENST00000536301 LINC01558Q9Y6Z2 57 aa2.4□□□□□ -2.03
CHD4-205ENST00000536301 KRTAP10-5P60370 271 aa2.39□□□□□ -2.03
CHD4-205ENST00000536301 CASC2Q6XLA1 102 aa2.39□□□□□ -2.03
CHD4-205ENST00000536301 KRTAP2-2Q9BYT5 123 aa2.39□□□□□ -2.03
CHD4-205ENST00000536301 KRTAP2-1Q9BYU5 128 aa2.39□□□□□ -2.03
CHD4-205ENST00000536301 A0A087WSZ3 146 aa2.38□□□□□ -2.03
CHD4-205ENST00000536301 SPRR2EP22531 72 aa2.38□□□□□ -2.03
CHD4-205ENST00000536301 SPRR2BP35325 72 aa2.38□□□□□ -2.03
CHD4-205ENST00000536301 SPRR2AP35326 72 aa2.38□□□□□ -2.03
CHD4-205ENST00000536301 LINC00313P59037 77 aa2.38□□□□□ -2.03
CHD4-205ENST00000536301 COA5Q86WW8 74 aa2.38□□□□□ -2.03
CHD4-205ENST00000536301 SPINK7P58062 85 aa2.37□□□□□ -2.03
CHD4-205ENST00000536301 WFDC13Q8IUB5 93 aa2.37□□□□□ -2.03
CHD4-205ENST00000536301 DEFB116Q30KQ4 102 aa2.36□□□□□ -2.03
CHD4-205ENST00000536301 KRTAP19-8Q3LI54 63 aa2.35□□□□□ -2.03
CHD4-205ENST00000536301 SPRR2FQ96RM1 72 aa2.35□□□□□ -2.03
CHD4-205ENST00000536301 IGHV6-1A0A0B4J1U7 121 aa2.33□□□□□ -2.04
CHD4-205ENST00000536301 C8orf87E5RJ46 101 aa2.33□□□□□ -2.04
CHD4-205ENST00000536301 LCE1AQ5T7P2 110 aa2.33□□□□□ -2.04
CHD4-205ENST00000536301 ACYP2P14621 99 aa2.32□□□□□ -2.04
CHD4-205ENST00000536301 LINC01554Q52M75 96 aa2.32□□□□□ -2.04
CHD4-205ENST00000536301 LINC00472Q9H8W2 130 aa2.32□□□□□ -2.04
CHD4-205ENST00000536301 A8MU10 97 aa2.31□□□□□ -2.04
CHD4-205ENST00000536301 MMP24-AS1A0A0U1RRL7 71 aa2.3□□□□□ -2.04
CHD4-205ENST00000536301 SPRR2DP22532 72 aa2.3□□□□□ -2.04
CHD4-205ENST00000536301 H1FX-AS1Q4G0G2 97 aa2.3□□□□□ -2.04
CHD4-205ENST00000536301 SPRR2GQ9BYE4 73 aa2.3□□□□□ -2.04
CHD4-205ENST00000536301 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
CHD4-205ENST00000536301 C8orf17Q9NRJ1 99 aa2.29□□□□□ -2.04
CHD4-205ENST00000536301 A0A1B0GU69 56 aa2.28□□□□□ -2.04
CHD4-205ENST00000536301 A0A1B0GVX0 72 aa2.28□□□□□ -2.04
CHD4-205ENST00000536301 UQCR11O14957 56 aa2.28□□□□□ -2.04
CHD4-205ENST00000536301 SPATA8Q6RVD6 105 aa2.28□□□□□ -2.04
CHD4-205ENST00000536301 MRPL34Q9BQ48 92 aaKnown RBP2.28□□□□□ -2.04
CHD4-205ENST00000536301 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
CHD4-205ENST00000536301 H3BS24 57 aa2.26□□□□□ -2.05
CHD4-205ENST00000536301 MIR22HGQ0VDD5 57 aa2.26□□□□□ -2.05
CHD4-205ENST00000536301 LCE3BQ5TA77 95 aa2.26□□□□□ -2.05
CHD4-205ENST00000536301 KRTAP8-1Q8IUC2 63 aa2.24□□□□□ -2.05
CHD4-205ENST00000536301 DMAC1Q96GE9 116 aa2.24□□□□□ -2.05
CHD4-205ENST00000536301 KRTAP4-8A0A0G2JLE6 195 aa2.23□□□□□ -2.05
CHD4-205ENST00000536301 PRAC1Q96KF2 57 aa2.23□□□□□ -2.05
CHD4-205ENST00000536301 KRTAP4-8Q9BYQ9 185 aa2.23□□□□□ -2.05
CHD4-205ENST00000536301 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
CHD4-205ENST00000536301 KRTAP4-9Q9BYQ8 210 aa2.22□□□□□ -2.05
CHD4-205ENST00000536301 MT1XP80297 61 aa2.2□□□□□ -2.06
CHD4-205ENST00000536301 CSAG1Q6PB30 78 aa2.2□□□□□ -2.06
CHD4-205ENST00000536301 IGKV2D-30A0A075B6S6 120 aa2.19□□□□□ -2.06
CHD4-205ENST00000536301 K7ERS5 55 aa2.19□□□□□ -2.06
CHD4-205ENST00000536301 IGKV2-30P06310 120 aa2.19□□□□□ -2.06
CHD4-205ENST00000536301 KRTAP3-1Q9BYR8 98 aa2.19□□□□□ -2.06
CHD4-205ENST00000536301 ADM2Q7Z4H4 148 aa2.18□□□□□ -2.06
CHD4-205ENST00000536301 Q5W150 140 aa2.17□□□□□ -2.06
CHD4-205ENST00000536301 KRTAP25-1Q3LHN0 102 aa2.16□□□□□ -2.06
CHD4-205ENST00000536301 KRTAP12-2P59991 146 aa2.15□□□□□ -2.07
CHD4-205ENST00000536301 ROMO1P60602 79 aa2.15□□□□□ -2.07
CHD4-205ENST00000536301 S4R3F8 94 aa2.15□□□□□ -2.07
CHD4-205ENST00000536301 KRTAP3-3Q9BYR6 98 aa2.14□□□□□ -2.07
CHD4-205ENST00000536301 KRTAP10-7P60409 375 aaPredicted RBP2.12□□□□□ -2.07
CHD4-205ENST00000536301 LCE1DQ5T752 114 aa2.12□□□□□ -2.07
CHD4-205ENST00000536301 A0A1B0GU33 70 aa2.11□□□□□ -2.07
CHD4-205ENST00000536301 PRO2289Q9P1D8 64 aa2.11□□□□□ -2.07
CHD4-205ENST00000536301 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
CHD4-205ENST00000536301 CRIPTQ9P021 101 aa2.09□□□□□ -2.07
CHD4-205ENST00000536301 SPINT4Q6UDR6 99 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms