RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 APOC3P02656 99 aa0.88□□□□□ -2.27
CMSS1-207ENST00000494412 DEFA5Q01523 94 aa0.88□□□□□ -2.27
CMSS1-207ENST00000494412 TRAV22A0A0B4J277 110 aa0.87□□□□□ -2.27
CMSS1-207ENST00000494412 CRYM-AS1A6NIL9 109 aa0.87□□□□□ -2.27
CMSS1-207ENST00000494412 IQCF6A8MYZ5 107 aa0.87□□□□□ -2.27
CMSS1-207ENST00000494412 KRTDAPP60985 99 aa0.87□□□□□ -2.27
CMSS1-207ENST00000494412 SFTA2Q6UW10 78 aa0.87□□□□□ -2.27
CMSS1-207ENST00000494412 ACBD7Q8N6N7 88 aa0.87□□□□□ -2.27
CMSS1-207ENST00000494412 FAM167A-AS1Q96KT0 104 aa0.87□□□□□ -2.27
CMSS1-207ENST00000494412 CDC42SE2Q9NRR3 84 aa0.87□□□□□ -2.27
CMSS1-207ENST00000494412 PLAC8Q9NZF1 115 aa0.87□□□□□ -2.27
CMSS1-207ENST00000494412 LINC01558Q9Y6Z2 57 aa0.87□□□□□ -2.27
CMSS1-207ENST00000494412 hADV29S1A0JD25 119 aa0.86□□□□□ -2.27
CMSS1-207ENST00000494412 SFT2D2O95562 160 aa0.86□□□□□ -2.27
CMSS1-207ENST00000494412 SPART-AS1P0CW21 52 aa0.86□□□□□ -2.27
CMSS1-207ENST00000494412 COX17Q14061 63 aa0.86□□□□□ -2.27
CMSS1-207ENST00000494412 SSBP3-AS1Q7Z2R9 100 aa0.86□□□□□ -2.27
CMSS1-207ENST00000494412 ZNF815PA8K554 130 aa0.85□□□□□ -2.27
CMSS1-207ENST00000494412 HMGN2P05204 90 aaKnown RBP0.85□□□□□ -2.27
CMSS1-207ENST00000494412 TRAPPC2P0DI81 140 aa0.85□□□□□ -2.27
CMSS1-207ENST00000494412 TRAPPC2BP0DI82 140 aa0.85□□□□□ -2.27
CMSS1-207ENST00000494412 SPRR2EP22531 72 aa0.85□□□□□ -2.27
CMSS1-207ENST00000494412 SPRR2BP35325 72 aa0.85□□□□□ -2.27
CMSS1-207ENST00000494412 SPRR2AP35326 72 aa0.85□□□□□ -2.27
CMSS1-207ENST00000494412 COX6A2Q02221 97 aa0.85□□□□□ -2.27
CMSS1-207ENST00000494412 KRTAP19-6Q3LI70 58 aa0.85□□□□□ -2.27
CMSS1-207ENST00000494412 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
CMSS1-207ENST00000494412 NXT2Q9NPJ8 142 aaKnown RBP0.85□□□□□ -2.27
CMSS1-207ENST00000494412 PRO1854Q9UHT4 67 aa0.85□□□□□ -2.27
CMSS1-207ENST00000494412 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
CMSS1-207ENST00000494412 M0R143 59 aa0.84□□□□□ -2.27
CMSS1-207ENST00000494412 GNGT2O14610 69 aa0.84□□□□□ -2.27
CMSS1-207ENST00000494412 UBE2D3P61077 147 aa0.84□□□□□ -2.27
CMSS1-207ENST00000494412 UBE2D2P62837 147 aa0.84□□□□□ -2.27
CMSS1-207ENST00000494412 SEC11AP67812 179 aa0.84□□□□□ -2.27
CMSS1-207ENST00000494412 WFDC2Q14508 124 aa0.84□□□□□ -2.27
CMSS1-207ENST00000494412 LEAP2Q969E1 77 aa0.84□□□□□ -2.27
CMSS1-207ENST00000494412 ARL2-SNX15V9GYD0 113 aa0.84□□□□□ -2.27
CMSS1-207ENST00000494412 COX6CP09669 75 aa0.83□□□□□ -2.28
CMSS1-207ENST00000494412 DEFB130BP0DP73 79 aa0.83□□□□□ -2.28
CMSS1-207ENST00000494412 DEFB130AP0DP74 79 aa0.83□□□□□ -2.28
CMSS1-207ENST00000494412 SPRR2DP22532 72 aa0.83□□□□□ -2.28
CMSS1-207ENST00000494412 PLGLAQ15195 96 aa0.83□□□□□ -2.28
CMSS1-207ENST00000494412 KRTAP19-2Q3LHN2 52 aa0.83□□□□□ -2.28
CMSS1-207ENST00000494412 COX6B2Q6YFQ2 88 aa0.83□□□□□ -2.28
CMSS1-207ENST00000494412 DPY30Q9C005 99 aa0.83□□□□□ -2.28
CMSS1-207ENST00000494412 AP4S1Q9Y587 144 aa0.83□□□□□ -2.28
CMSS1-207ENST00000494412 MPC2O95563 127 aa0.82□□□□□ -2.28
CMSS1-207ENST00000494412 S100A8P05109 93 aa0.82□□□□□ -2.28
CMSS1-207ENST00000494412 IFI6P09912 130 aa0.82□□□□□ -2.28
CMSS1-207ENST00000494412 APELAP0DMC3 54 aa0.82□□□□□ -2.28
CMSS1-207ENST00000494412 FAM223AQ8IWN6 122 aa0.82□□□□□ -2.28
CMSS1-207ENST00000494412 MUC5ACP98088 5654 aa0.82□□□□□ -2.28
CMSS1-207ENST00000494412 MT-ATP8P03928 68 aa0.81□□□□□ -2.28
CMSS1-207ENST00000494412 IGLC1P0CG04 106 aa0.81□□□□□ -2.28
CMSS1-207ENST00000494412 DEFB131AP59861 70 aa0.81□□□□□ -2.28
CMSS1-207ENST00000494412 Q6JHZ5 121 aa0.81□□□□□ -2.28
CMSS1-207ENST00000494412 SPINK6Q6UWN8 80 aa0.81□□□□□ -2.28
CMSS1-207ENST00000494412 HEPN1Q6WQI6 88 aa0.81□□□□□ -2.28
CMSS1-207ENST00000494412 RPS27LQ71UM5 84 aaKnown RBP0.81□□□□□ -2.28
CMSS1-207ENST00000494412 LINC00472Q9H8W2 130 aa0.81□□□□□ -2.28
CMSS1-207ENST00000494412 A0A096LPF7 62 aa0.8□□□□□ -2.28
CMSS1-207ENST00000494412 A0A1B0GWA3 101 aa0.8□□□□□ -2.28
CMSS1-207ENST00000494412 H3BUA1 57 aa0.8□□□□□ -2.28
CMSS1-207ENST00000494412 M0R3E3 92 aa0.8□□□□□ -2.28
CMSS1-207ENST00000494412 PRH1P02810 166 aa0.8□□□□□ -2.28
CMSS1-207ENST00000494412 MGPP08493 103 aa0.8□□□□□ -2.28
CMSS1-207ENST00000494412 WFDC10BQ8IUB3 73 aa0.8□□□□□ -2.28
CMSS1-207ENST00000494412 USMG5Q96IX5 58 aa0.8□□□□□ -2.28
CMSS1-207ENST00000494412 FAM223BA6NKX1 122 aa0.79□□□□□ -2.28
CMSS1-207ENST00000494412 SPRR2FQ96RM1 72 aa0.79□□□□□ -2.28
CMSS1-207ENST00000494412 PMCHL2Q9BQD1 86 aa0.79□□□□□ -2.28
CMSS1-207ENST00000494412 RABAC1Q9UI14 185 aa0.79□□□□□ -2.28
CMSS1-207ENST00000494412 NDUFA3O95167 84 aa0.78□□□□□ -2.28
CMSS1-207ENST00000494412 MT2AP02795 61 aa0.78□□□□□ -2.28
CMSS1-207ENST00000494412 LINC00032P0C843 101 aa0.78□□□□□ -2.28
CMSS1-207ENST00000494412 S100A3P33764 101 aa0.78□□□□□ -2.28
CMSS1-207ENST00000494412 RPL38P63173 70 aaKnown RBP0.78□□□□□ -2.28
CMSS1-207ENST00000494412 TDRG1Q3Y452 100 aa0.78□□□□□ -2.28
CMSS1-207ENST00000494412 MT1FP04733 61 aa0.77□□□□□ -2.29
CMSS1-207ENST00000494412 PSMG4Q5JS54 123 aa0.77□□□□□ -2.29
CMSS1-207ENST00000494412 RHPN1-AS1Q9BWJ2 59 aa0.77□□□□□ -2.29
CMSS1-207ENST00000494412 CPSF4LA6NMK7 179 aaKnown RBP0.76□□□□□ -2.29
CMSS1-207ENST00000494412 BCE1O60756 84 aa0.76□□□□□ -2.29
CMSS1-207ENST00000494412 RPS27P42677 84 aaKnown RBP0.76□□□□□ -2.29
CMSS1-207ENST00000494412 MT4P47944 62 aa0.76□□□□□ -2.29
CMSS1-207ENST00000494412 PKIAP61925 76 aa0.76□□□□□ -2.29
CMSS1-207ENST00000494412 A0A0G2JND7 137 aa0.75□□□□□ -2.29
CMSS1-207ENST00000494412 H3BNG1 76 aa0.75□□□□□ -2.29
CMSS1-207ENST00000494412 NDUFC1O43677 76 aa0.75□□□□□ -2.29
CMSS1-207ENST00000494412 HTN1P15515 57 aa0.75□□□□□ -2.29
CMSS1-207ENST00000494412 DEFB1P60022 68 aa0.75□□□□□ -2.29
CMSS1-207ENST00000494412 COL5A1-AS1Q5SY13 56 aa0.75□□□□□ -2.29
CMSS1-207ENST00000494412 SPRR4Q96PI1 79 aa0.75□□□□□ -2.29
CMSS1-207ENST00000494412 NOP10Q9NPE3 64 aaKnown RBP0.75□□□□□ -2.29
CMSS1-207ENST00000494412 NDUFA4O00483 81 aa0.74□□□□□ -2.29
CMSS1-207ENST00000494412 SAA2P0DJI9 122 aaPredicted RBP0.74□□□□□ -2.29
CMSS1-207ENST00000494412 LINC01556Q5JQF7 62 aa0.74□□□□□ -2.29
CMSS1-207ENST00000494412 PRO0255Q9UI72 69 aa0.74□□□□□ -2.29
CMSS1-207ENST00000494412 TIMM8BQ9Y5J9 83 aaPredicted RBP0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms