RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 SCGB1A1P11684 91 aa12.73□□□□□ -0.37
UBE2E3-202ENST00000410062 Q75L30 129 aa12.71□□□□□ -0.37
UBE2E3-202ENST00000410062 PRO0461Q9UI25 63 aa12.7□□□□□ -0.38
UBE2E3-202ENST00000410062 FAT4Q6V0I7 4981 aa12.7□□□□□ -0.38
UBE2E3-202ENST00000410062 LINC00313P59037 77 aa12.69□□□□□ -0.38
UBE2E3-202ENST00000410062 IGHV6-1A0A0B4J1U7 121 aa12.69□□□□□ -0.38
UBE2E3-202ENST00000410062 NOTCH2NLQ7Z3S9 236 aa12.69□□□□□ -0.38
UBE2E3-202ENST00000410062 J3KT08 172 aa12.66□□□□□ -0.38
UBE2E3-202ENST00000410062 GTF2H5Q6ZYL4 71 aa12.65□□□□□ -0.38
UBE2E3-202ENST00000410062 C20orf166-AS1Q96NR2 134 aa12.65□□□□□ -0.38
UBE2E3-202ENST00000410062 A0A1B0GVX0 72 aa12.64□□□□□ -0.39
UBE2E3-202ENST00000410062 A8MUU9 505 aa12.63□□□□□ -0.39
UBE2E3-202ENST00000410062 ATP11AUNQ6ZP68 121 aa12.63□□□□□ -0.39
UBE2E3-202ENST00000410062 KRTAP16-1A8MUX0 517 aa12.61□□□□□ -0.39
UBE2E3-202ENST00000410062 NREPQ16612 68 aa12.61□□□□□ -0.39
UBE2E3-202ENST00000410062 C8orf87E5RJ46 101 aa12.56□□□□□ -0.4
UBE2E3-202ENST00000410062 NDUFB1O75438 58 aa12.56□□□□□ -0.4
UBE2E3-202ENST00000410062 A8MWP4 228 aa12.54□□□□□ -0.4
UBE2E3-202ENST00000410062 F8W1H4 67 aa12.52□□□□□ -0.4
UBE2E3-202ENST00000410062 IGKV3D-7A0A0C4DH55 119 aa12.52□□□□□ -0.41
UBE2E3-202ENST00000410062 LCE2AQ5TA79 106 aaPredicted RBP12.47□□□□□ -0.41
UBE2E3-202ENST00000410062 Q6ZVQ6 151 aa12.46□□□□□ -0.42
UBE2E3-202ENST00000410062 C8orf17Q9NRJ1 99 aa12.46□□□□□ -0.42
UBE2E3-202ENST00000410062 J3QR89 54 aa12.45□□□□□ -0.42
UBE2E3-202ENST00000410062 KRTAP19-2Q3LHN2 52 aa12.45□□□□□ -0.42
UBE2E3-202ENST00000410062 ETDBQ3ZM63 59 aa12.45□□□□□ -0.42
UBE2E3-202ENST00000410062 PRR15Q8IV56 129 aa12.45□□□□□ -0.42
UBE2E3-202ENST00000410062 BPY2O14599 106 aa12.43□□□□□ -0.42
UBE2E3-202ENST00000410062 LCE2CQ5TA81 110 aa12.42□□□□□ -0.42
UBE2E3-202ENST00000410062 LINC00846Q9NV44 126 aa12.41□□□□□ -0.42
UBE2E3-202ENST00000410062 K7EQZ3 153 aa12.4□□□□□ -0.42
UBE2E3-202ENST00000410062 UBL5Q9BZL1 73 aa12.35□□□□□ -0.43
UBE2E3-202ENST00000410062 MMP24-AS1A0A0U1RRL7 71 aa12.35□□□□□ -0.43
UBE2E3-202ENST00000410062 Q8N9P0 234 aaPredicted RBP12.35□□□□□ -0.43
UBE2E3-202ENST00000410062 Q8N9L7 120 aa12.31□□□□□ -0.44
UBE2E3-202ENST00000410062 COX6B2Q6YFQ2 88 aa12.29□□□□□ -0.44
UBE2E3-202ENST00000410062 ZCCHC13Q8WW36 166 aaKnown RBP12.29□□□□□ -0.44
UBE2E3-202ENST00000410062 TMEM254Q8TBM7 123 aa12.27□□□□□ -0.44
UBE2E3-202ENST00000410062 hDV103S1A0JD37 113 aa12.26□□□□□ -0.45
UBE2E3-202ENST00000410062 MRPL34Q9BQ48 92 aaKnown RBP12.26□□□□□ -0.45
UBE2E3-202ENST00000410062 MT1HP80294 61 aa12.23□□□□□ -0.45
UBE2E3-202ENST00000410062 WFDC13Q8IUB5 93 aa12.2□□□□□ -0.46
UBE2E3-202ENST00000410062 NDUFS5O43920 106 aa12.18□□□□□ -0.46
UBE2E3-202ENST00000410062 CASC2Q6XLA1 102 aa12.16□□□□□ -0.46
UBE2E3-202ENST00000410062 HRES1P13985 223 aa12.13□□□□□ -0.47
UBE2E3-202ENST00000410062 FLGP20930 4061 aaPredicted RBP12.12□□□□□ -0.47
UBE2E3-202ENST00000410062 SPINK7P58062 85 aa12.12□□□□□ -0.47
UBE2E3-202ENST00000410062 ACYP1P07311 99 aa12.1□□□□□ -0.47
UBE2E3-202ENST00000410062 CXCL6P80162 114 aa12.1□□□□□ -0.47
UBE2E3-202ENST00000410062 HCG22E2RYF7 251 aa12.08□□□□□ -0.48
UBE2E3-202ENST00000410062 FAM240AA0A1B0GVK7 77 aa12.07□□□□□ -0.48
UBE2E3-202ENST00000410062 MPLKIPQ8TAP9 179 aa12.06□□□□□ -0.48
UBE2E3-202ENST00000410062 M0R2T5 61 aa12.05□□□□□ -0.48
UBE2E3-202ENST00000410062 RBM12B-AS1Q9P1G2 102 aa12.05□□□□□ -0.48
UBE2E3-202ENST00000410062 FAM236DA0A1B0GTK5 79 aa12.03□□□□□ -0.48
UBE2E3-202ENST00000410062 FAM236CP0DP71 79 aa12.03□□□□□ -0.48
UBE2E3-202ENST00000410062 Q5W150 140 aa12.01□□□□□ -0.49
UBE2E3-202ENST00000410062 ANAPC13Q9BS18 74 aa11.95□□□□□ -0.5
UBE2E3-202ENST00000410062 KRTAP10-6P60371 365 aaPredicted RBP11.93□□□□□ -0.5
UBE2E3-202ENST00000410062 ATP5EP2Q5VTU8 51 aa11.92□□□□□ -0.5
UBE2E3-202ENST00000410062 LORP23490 312 aaPredicted RBP11.91□□□□□ -0.5
UBE2E3-202ENST00000410062 IGKV2D-30A0A075B6S6 120 aa11.9□□□□□ -0.5
UBE2E3-202ENST00000410062 IGKV2-30P06310 120 aa11.9□□□□□ -0.5
UBE2E3-202ENST00000410062 HIST1H4AP62805 103 aaKnown RBP11.85□□□□□ -0.51
UBE2E3-202ENST00000410062 C7orf65Q6ZTY9 151 aa11.85□□□□□ -0.51
UBE2E3-202ENST00000410062 LINC00643Q86TS7 51 aa11.85□□□□□ -0.51
UBE2E3-202ENST00000410062 KRTAP9-2Q9BYQ4 174 aa11.84□□□□□ -0.51
UBE2E3-202ENST00000410062 TP53AIP1Q9HCN2 124 aa11.81□□□□□ -0.52
UBE2E3-202ENST00000410062 MT-ATP8P03928 68 aa11.78□□□□□ -0.52
UBE2E3-202ENST00000410062 A0A087WVE0 104 aa11.74□□□□□ -0.53
UBE2E3-202ENST00000410062 SMIM20Q8N5G0 67 aa11.73□□□□□ -0.53
UBE2E3-202ENST00000410062 C5orf47Q569G3 176 aa11.71□□□□□ -0.54
UBE2E3-202ENST00000410062 LCE2DQ5TA82 110 aaPredicted RBP11.67□□□□□ -0.54
UBE2E3-202ENST00000410062 C4orf26Q17RF5 130 aa11.67□□□□□ -0.54
UBE2E3-202ENST00000410062 H1FX-AS1Q4G0G2 97 aa11.63□□□□□ -0.55
UBE2E3-202ENST00000410062 KRTAP9-8Q9BYQ0 159 aa11.63□□□□□ -0.55
UBE2E3-202ENST00000410062 TRAV22A0A0B4J277 110 aa11.62□□□□□ -0.55
UBE2E3-202ENST00000410062 IMUPQ9GZP8 106 aa11.58□□□□□ -0.55
UBE2E3-202ENST00000410062 UQCRQO14949 82 aa11.58□□□□□ -0.56
UBE2E3-202ENST00000410062 CCDC179H3BU77 68 aa11.57□□□□□ -0.56
UBE2E3-202ENST00000410062 RPS28P62857 69 aaKnown RBP11.55□□□□□ -0.56
UBE2E3-202ENST00000410062 CYP4F30PQ9H0H9 118 aa11.54□□□□□ -0.56
UBE2E3-202ENST00000410062 H0Y9P7 68 aa11.51□□□□□ -0.57
UBE2E3-202ENST00000410062 MT2AP02795 61 aa11.51□□□□□ -0.57
UBE2E3-202ENST00000410062 LOC101927531A0A1B0GV80 90 aa11.5□□□□□ -0.57
UBE2E3-202ENST00000410062 KRTAP3-1Q9BYR8 98 aa11.5□□□□□ -0.57
UBE2E3-202ENST00000410062 C1orf64Q8NEQ6 169 aa11.48□□□□□ -0.57
UBE2E3-202ENST00000410062 ATOX1O00244 68 aa11.46□□□□□ -0.57
UBE2E3-202ENST00000410062 OCR1Q9BZK8 76 aa11.46□□□□□ -0.57
UBE2E3-202ENST00000410062 MT1FP04733 61 aa11.43□□□□□ -0.58
UBE2E3-202ENST00000410062 FSIP2Q5CZC0 6907 aa11.39□□□□□ -0.59
UBE2E3-202ENST00000410062 KRTAP10-10P60014 251 aa11.38□□□□□ -0.59
UBE2E3-202ENST00000410062 LINC00208Q96KT6 92 aa11.37□□□□□ -0.59
UBE2E3-202ENST00000410062 MP68P56378 58 aa11.33□□□□□ -0.6
UBE2E3-202ENST00000410062 S4R3F8 94 aa11.33□□□□□ -0.6
UBE2E3-202ENST00000410062 KRTAP9-6A0A140TA67 174 aa11.3□□□□□ -0.6
UBE2E3-202ENST00000410062 COX7CP15954 63 aa11.28□□□□□ -0.6
UBE2E3-202ENST00000410062 TMEM258P61165 79 aa11.28□□□□□ -0.6
UBE2E3-202ENST00000410062 KLKP1Q107X0 134 aa11.27□□□□□ -0.61
UBE2E3-202ENST00000410062 LCA10Q71F78 164 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms