RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 TRAV13-1A0A0B4J241 112 aa3.63□□□□□ -1.83
H3F3A-201ENST00000366813 I3L3M4 83 aa3.63□□□□□ -1.83
H3F3A-201ENST00000366813 IGKV2D-28P01615 120 aa3.63□□□□□ -1.83
H3F3A-201ENST00000366813 PRLHP81277 87 aa3.63□□□□□ -1.83
H3F3A-201ENST00000366813 FAM19A3Q7Z5A8 133 aa3.63□□□□□ -1.83
H3F3A-201ENST00000366813 IMUPQ9GZP8 106 aa3.63□□□□□ -1.83
H3F3A-201ENST00000366813 XAGE1AQ9HD64 81 aa3.63□□□□□ -1.83
H3F3A-201ENST00000366813 TRBV7-7A0A0K0K1E9 115 aa3.62□□□□□ -1.83
H3F3A-201ENST00000366813 TINCRA0A1B0GVN0 87 aa3.62□□□□□ -1.83
H3F3A-201ENST00000366813 A0A1B0GVX0 72 aa3.62□□□□□ -1.83
H3F3A-201ENST00000366813 ACYP1P07311 99 aa3.62□□□□□ -1.83
H3F3A-201ENST00000366813 TMEM170BQ5T4T1 132 aa3.62□□□□□ -1.83
H3F3A-201ENST00000366813 C9JAW5 83 aa3.61□□□□□ -1.83
H3F3A-201ENST00000366813 LST1O00453 97 aa3.61□□□□□ -1.83
H3F3A-201ENST00000366813 RPL39P62891 51 aaKnown RBP3.61□□□□□ -1.83
H3F3A-201ENST00000366813 LINC00483Q53H64 154 aa3.61□□□□□ -1.83
H3F3A-201ENST00000366813 C2orf82Q6UX34 121 aa3.61□□□□□ -1.83
H3F3A-201ENST00000366813 MUSTN1Q8IVN3 82 aa3.61□□□□□ -1.83
H3F3A-201ENST00000366813 ANAPC13Q9BS18 74 aa3.61□□□□□ -1.83
H3F3A-201ENST00000366813 TIMM21Q9BVV7 248 aa3.61□□□□□ -1.83
H3F3A-201ENST00000366813 SNCGO76070 127 aa3.6□□□□□ -1.83
H3F3A-201ENST00000366813 COX6CP09669 75 aa3.6□□□□□ -1.83
H3F3A-201ENST00000366813 COPS9Q8WXC6 57 aa3.6□□□□□ -1.83
H3F3A-201ENST00000366813 TEX49A0A1B0GTD5 131 aa3.57□□□□□ -1.84
H3F3A-201ENST00000366813 TRACP01848 142 aa3.57□□□□□ -1.84
H3F3A-201ENST00000366813 FAM19A1Q7Z5A9 133 aa3.57□□□□□ -1.84
H3F3A-201ENST00000366813 TMEM126AQ9H061 195 aa3.57□□□□□ -1.84
H3F3A-201ENST00000366813 IGHV3OR16-9A0A0B4J2B5 98 aa3.56□□□□□ -1.84
H3F3A-201ENST00000366813 RPS29P62273 56 aaKnown RBP3.56□□□□□ -1.84
H3F3A-201ENST00000366813 SFTA2Q6UW10 78 aa3.56□□□□□ -1.84
H3F3A-201ENST00000366813 SPRR4Q96PI1 79 aa3.56□□□□□ -1.84
H3F3A-201ENST00000366813 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
H3F3A-201ENST00000366813 HERVK_113P63121 156 aa3.55□□□□□ -1.84
H3F3A-201ENST00000366813 C5orf47Q569G3 176 aa3.55□□□□□ -1.84
H3F3A-201ENST00000366813 LINC00643Q86TS7 51 aa3.55□□□□□ -1.84
H3F3A-201ENST00000366813 HIGD2AQ9BW72 106 aa3.55□□□□□ -1.84
H3F3A-201ENST00000366813 CCDC179H3BU77 68 aa3.54□□□□□ -1.84
H3F3A-201ENST00000366813 RPL37P61927 97 aaKnown RBP3.54□□□□□ -1.84
H3F3A-201ENST00000366813 HIST1H4AP62805 103 aaKnown RBP3.54□□□□□ -1.84
H3F3A-201ENST00000366813 Q5W150 140 aa3.54□□□□□ -1.84
H3F3A-201ENST00000366813 LINC00308Q8TCZ7 52 aa3.54□□□□□ -1.84
H3F3A-201ENST00000366813 ZNF625Q96I27 306 aaPredicted RBP3.54□□□□□ -1.84
H3F3A-201ENST00000366813 IGLV6-57P01721 117 aa3.53□□□□□ -1.84
H3F3A-201ENST00000366813 OBSCN-AS1Q96MR7 158 aa3.53□□□□□ -1.84
H3F3A-201ENST00000366813 CDKN2A-AS1Q9UH64 79 aa3.53□□□□□ -1.84
H3F3A-201ENST00000366813 SS18L2Q9UHA2 77 aa3.53□□□□□ -1.84
H3F3A-201ENST00000366813 A0A1B0GX51 115 aa3.52□□□□□ -1.85
H3F3A-201ENST00000366813 UQCRQO14949 82 aa3.52□□□□□ -1.85
H3F3A-201ENST00000366813 MOBPQ13875 183 aa3.52□□□□□ -1.85
H3F3A-201ENST00000366813 TRAV13-2A0A0B4J235 113 aa3.51□□□□□ -1.85
H3F3A-201ENST00000366813 H7C2G1 150 aa3.51□□□□□ -1.85
H3F3A-201ENST00000366813 RPS28P62857 69 aaKnown RBP3.51□□□□□ -1.85
H3F3A-201ENST00000366813 SOSTDC1Q6X4U4 206 aa3.51□□□□□ -1.85
H3F3A-201ENST00000366813 CLEC2BQ92478 149 aa3.51□□□□□ -1.85
H3F3A-201ENST00000366813 H0YGX0 51 aa3.5□□□□□ -1.85
H3F3A-201ENST00000366813 MEIG1Q5JSS6 88 aa3.5□□□□□ -1.85
H3F3A-201ENST00000366813 M0R378 163 aa3.49□□□□□ -1.85
H3F3A-201ENST00000366813 ATOX1O00244 68 aa3.49□□□□□ -1.85
H3F3A-201ENST00000366813 BAALC-AS2P0C853 105 aa3.49□□□□□ -1.85
H3F3A-201ENST00000366813 COX7CP15954 63 aa3.49□□□□□ -1.85
H3F3A-201ENST00000366813 Q6JHZ5 121 aa3.49□□□□□ -1.85
H3F3A-201ENST00000366813 SMCR5Q8TEV8 140 aa3.49□□□□□ -1.85
H3F3A-201ENST00000366813 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
H3F3A-201ENST00000366813 FAM236AA0A1B0GUQ0 79 aa3.48□□□□□ -1.85
H3F3A-201ENST00000366813 FAM236BA0A1B0GV22 79 aa3.48□□□□□ -1.85
H3F3A-201ENST00000366813 TOMM7Q9P0U1 55 aa3.48□□□□□ -1.85
H3F3A-201ENST00000366813 ZNF706Q9Y5V0 76 aaPredicted RBP3.48□□□□□ -1.85
H3F3A-201ENST00000366813 ATP5EP2Q5VTU8 51 aa3.47□□□□□ -1.85
H3F3A-201ENST00000366813 SSBP3-AS1Q7Z2R9 100 aa3.47□□□□□ -1.85
H3F3A-201ENST00000366813 SMIM20Q8N5G0 67 aa3.47□□□□□ -1.85
H3F3A-201ENST00000366813 TRBV10-3A0A0K0K1G6 114 aa3.46□□□□□ -1.85
H3F3A-201ENST00000366813 TMEM258P61165 79 aa3.45□□□□□ -1.86
H3F3A-201ENST00000366813 S100A7L2Q5SY68 101 aa3.45□□□□□ -1.86
H3F3A-201ENST00000366813 C9orf153Q5TBE3 101 aa3.45□□□□□ -1.86
H3F3A-201ENST00000366813 COX7B2Q8TF08 81 aa3.45□□□□□ -1.86
H3F3A-201ENST00000366813 J3KT08 172 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 KRTAP5-8O75690 187 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 NDUFC2O95298 119 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 NPC2P61916 151 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 SERP2Q8N6R1 65 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 C20orf166-AS1Q96NR2 134 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 SND1-IT1Q9HBX3 110 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 JMJD7-PLA2G4BH0Y9G9 81 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 H3BQ85 93 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 DNAL4O96015 105 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 SPRR2EP22531 72 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 SPRR2BP35325 72 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 SPRR2AP35326 72 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 Q8IZM0 81 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 MIR7-3HGQ8N6C7 128 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 SMIM11BQ8TCY0 68 aa3.44□□□□□ -1.86
H3F3A-201ENST00000366813 BPY2O14599 106 aa3.43□□□□□ -1.86
H3F3A-201ENST00000366813 CCKP06307 115 aa3.43□□□□□ -1.86
H3F3A-201ENST00000366813 COX17Q14061 63 aa3.43□□□□□ -1.86
H3F3A-201ENST00000366813 ORMDL1Q9P0S3 153 aa3.43□□□□□ -1.86
H3F3A-201ENST00000366813 hADV29S1A0JD25 119 aa3.42□□□□□ -1.86
H3F3A-201ENST00000366813 HRCT1Q6UXD1 115 aa3.42□□□□□ -1.86
H3F3A-201ENST00000366813 LOC110117498A0A087WWA1 95 aa3.41□□□□□ -1.86
H3F3A-201ENST00000366813 A6NN06 94 aa3.41□□□□□ -1.86
H3F3A-201ENST00000366813 TMEM256-PLSCR3K7ERE1 68 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms