RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 NDUFA12Q9UI09 145 aa2.2□□□□□ -2.06
VMP1-205ENST00000587470 PSORS1C2Q9UIG4 136 aa2.2□□□□□ -2.06
VMP1-205ENST00000587470 ERG28Q9UKR5 140 aa2.2□□□□□ -2.06
VMP1-205ENST00000587470 C22orf24Q9Y442 160 aa2.2□□□□□ -2.06
VMP1-205ENST00000587470 SMIM13P0DJ93 91 aa2.19□□□□□ -2.06
VMP1-205ENST00000587470 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
VMP1-205ENST00000587470 LUZP6Q538Z0 58 aa2.19□□□□□ -2.06
VMP1-205ENST00000587470 SFTA2Q6UW10 78 aa2.19□□□□□ -2.06
VMP1-205ENST00000587470 IGFL1Q6UW32 110 aa2.19□□□□□ -2.06
VMP1-205ENST00000587470 FAM19A5Q7Z5A7 132 aaPredicted RBP2.19□□□□□ -2.06
VMP1-205ENST00000587470 TTTY13Q9BZ97 58 aa2.19□□□□□ -2.06
VMP1-205ENST00000587470 RBM12B-AS1Q9P1G2 102 aa2.19□□□□□ -2.06
VMP1-205ENST00000587470 TP73-AS1Q9UF72 201 aa2.19□□□□□ -2.06
VMP1-205ENST00000587470 MYMXA0A1B0GTQ4 84 aa2.18□□□□□ -2.06
VMP1-205ENST00000587470 LINC00158P58513 81 aa2.18□□□□□ -2.06
VMP1-205ENST00000587470 SOSTDC1Q6X4U4 206 aa2.18□□□□□ -2.06
VMP1-205ENST00000587470 ATOH7Q8N100 152 aa2.18□□□□□ -2.06
VMP1-205ENST00000587470 MIR7-3HGQ8N6C7 128 aa2.18□□□□□ -2.06
VMP1-205ENST00000587470 SPANXA2-OT1Q8N9U9 137 aa2.18□□□□□ -2.06
VMP1-205ENST00000587470 CBY1Q9Y3M2 126 aa2.18□□□□□ -2.06
VMP1-205ENST00000587470 LINC00587B1AMM8 73 aa2.17□□□□□ -2.06
VMP1-205ENST00000587470 TIMM17BO60830 172 aa2.17□□□□□ -2.06
VMP1-205ENST00000587470 IGLV7-43P04211 117 aa2.17□□□□□ -2.06
VMP1-205ENST00000587470 S100A6P06703 90 aa2.17□□□□□ -2.06
VMP1-205ENST00000587470 LGALS3P17931 250 aaKnown RBP2.17□□□□□ -2.06
VMP1-205ENST00000587470 S100A2P29034 98 aa2.17□□□□□ -2.06
VMP1-205ENST00000587470 LINC00483Q53H64 154 aa2.17□□□□□ -2.06
VMP1-205ENST00000587470 SPINK6Q6UWN8 80 aa2.17□□□□□ -2.06
VMP1-205ENST00000587470 KRTAP13-1Q8IUC0 172 aa2.17□□□□□ -2.06
VMP1-205ENST00000587470 DAND5Q8N907 189 aa2.17□□□□□ -2.06
VMP1-205ENST00000587470 TNXBP22105 4242 aa2.17□□□□□ -2.06
VMP1-205ENST00000587470 C20orf202A1L168 122 aa2.16□□□□□ -2.06
VMP1-205ENST00000587470 ZNF815PA8K554 130 aa2.16□□□□□ -2.06
VMP1-205ENST00000587470 C8orf87E5RJ46 101 aa2.16□□□□□ -2.06
VMP1-205ENST00000587470 M0R378 163 aa2.16□□□□□ -2.06
VMP1-205ENST00000587470 BCE1O60756 84 aa2.16□□□□□ -2.06
VMP1-205ENST00000587470 SPRR1AP35321 89 aa2.16□□□□□ -2.06
VMP1-205ENST00000587470 UBE2BP63146 152 aa2.16□□□□□ -2.06
VMP1-205ENST00000587470 MOBPQ13875 183 aa2.16□□□□□ -2.06
VMP1-205ENST00000587470 MEIG1Q5JSS6 88 aa2.16□□□□□ -2.06
VMP1-205ENST00000587470 C1orf137Q5JT78 98 aa2.16□□□□□ -2.06
VMP1-205ENST00000587470 LINC01600Q96MT4 127 aa2.16□□□□□ -2.06
VMP1-205ENST00000587470 TRBV10-2A0A0K0K1G8 114 aa2.15□□□□□ -2.07
VMP1-205ENST00000587470 TMEM238C9JI98 176 aa2.15□□□□□ -2.07
VMP1-205ENST00000587470 NDUFC2O95298 119 aa2.15□□□□□ -2.07
VMP1-205ENST00000587470 IGLV6-57P01721 117 aa2.15□□□□□ -2.07
VMP1-205ENST00000587470 AKR1D1P51857 326 aa2.15□□□□□ -2.07
VMP1-205ENST00000587470 JOSD1Q15040 202 aaPredicted RBP2.15□□□□□ -2.07
VMP1-205ENST00000587470 LINC00308Q8TCZ7 52 aa2.15□□□□□ -2.07
VMP1-205ENST00000587470 KCNQ1DNQ9H478 68 aa2.15□□□□□ -2.07
VMP1-205ENST00000587470 ZNF706Q9Y5V0 76 aaPredicted RBP2.15□□□□□ -2.07
VMP1-205ENST00000587470 TRBV10-3A0A0K0K1G6 114 aa2.14□□□□□ -2.07
VMP1-205ENST00000587470 PYY3Q5JQD4 70 aa2.14□□□□□ -2.07
VMP1-205ENST00000587470 DIRC1Q969H9 104 aa2.14□□□□□ -2.07
VMP1-205ENST00000587470 SPANXDQ9BXN6 97 aa2.14□□□□□ -2.07
VMP1-205ENST00000587470 TMEM126AQ9H061 195 aa2.14□□□□□ -2.07
VMP1-205ENST00000587470 SPANXCQ9NY87 97 aa2.14□□□□□ -2.07
VMP1-205ENST00000587470 LPAP08519 4548 aa2.13□□□□□ -2.07
VMP1-205ENST00000587470 NCR3O14931 201 aa2.13□□□□□ -2.07
VMP1-205ENST00000587470 DLEU1O43261 78 aa2.13□□□□□ -2.07
VMP1-205ENST00000587470 COX8AP10176 69 aa2.13□□□□□ -2.07
VMP1-205ENST00000587470 IFITM1P13164 125 aa2.13□□□□□ -2.07
VMP1-205ENST00000587470 RPL28P46779 137 aaKnown RBP2.13□□□□□ -2.07
VMP1-205ENST00000587470 NPC2P61916 151 aa2.13□□□□□ -2.07
VMP1-205ENST00000587470 PRLHP81277 87 aa2.13□□□□□ -2.07
VMP1-205ENST00000587470 C4orf26Q17RF5 130 aa2.13□□□□□ -2.07
VMP1-205ENST00000587470 MUSTN1Q8IVN3 82 aa2.13□□□□□ -2.07
VMP1-205ENST00000587470 C14orf144Q96I85 54 aa2.13□□□□□ -2.07
VMP1-205ENST00000587470 ANAPC13Q9BS18 74 aa2.13□□□□□ -2.07
VMP1-205ENST00000587470 SPANXB1Q9NS25 103 aaPredicted RBP2.13□□□□□ -2.07
VMP1-205ENST00000587470 ERC2-IT1O76042 136 aa2.12□□□□□ -2.07
VMP1-205ENST00000587470 SCGB1C2P0DMR2 95 aa2.12□□□□□ -2.07
VMP1-205ENST00000587470 DDTP30046 118 aa2.12□□□□□ -2.07
VMP1-205ENST00000587470 SCGB1D4Q6XE38 83 aa2.12□□□□□ -2.07
VMP1-205ENST00000587470 C2orf91Q6ZV80 131 aa2.12□□□□□ -2.07
VMP1-205ENST00000587470 ST20-AS1Q8NBB2 130 aa2.12□□□□□ -2.07
VMP1-205ENST00000587470 Q9BRP9 147 aa2.12□□□□□ -2.07
VMP1-205ENST00000587470 MIEN1Q9BRT3 115 aa2.12□□□□□ -2.07
VMP1-205ENST00000587470 KRTAP13-2Q52LG2 175 aa2.11□□□□□ -2.07
VMP1-205ENST00000587470 SPATA45Q537H7 98 aa2.11□□□□□ -2.07
VMP1-205ENST00000587470 SMCR5Q8TEV8 140 aa2.11□□□□□ -2.07
VMP1-205ENST00000587470 VAMP8Q9BV40 100 aa2.11□□□□□ -2.07
VMP1-205ENST00000587470 HIGD1BQ9P298 99 aa2.11□□□□□ -2.07
VMP1-205ENST00000587470 TRAV23DV6A0A075B6W5 121 aa2.1□□□□□ -2.07
VMP1-205ENST00000587470 ETDCA0A1B0GVM5 59 aa2.1□□□□□ -2.07
VMP1-205ENST00000587470 ZNF73O43830 326 aaPredicted RBP2.1□□□□□ -2.07
VMP1-205ENST00000587470 FAM229BQ4G0N7 80 aa2.1□□□□□ -2.07
VMP1-205ENST00000587470 S100A7L2Q5SY68 101 aa2.1□□□□□ -2.07
VMP1-205ENST00000587470 SLC25A34Q6PIV7 304 aa2.1□□□□□ -2.07
VMP1-205ENST00000587470 Q6ZRX8 168 aa2.1□□□□□ -2.07
VMP1-205ENST00000587470 OR13C6PQ8NH95 151 aa2.1□□□□□ -2.07
VMP1-205ENST00000587470 SMIM11BQ8TCY0 68 aa2.1□□□□□ -2.07
VMP1-205ENST00000587470 SPRR4Q96PI1 79 aa2.1□□□□□ -2.07
VMP1-205ENST00000587470 HIGD2AQ9BW72 106 aa2.1□□□□□ -2.07
VMP1-205ENST00000587470 TRAV13-2A0A0B4J235 113 aa2.09□□□□□ -2.07
VMP1-205ENST00000587470 TRBV7-6A0A0J9YX20 115 aa2.09□□□□□ -2.07
VMP1-205ENST00000587470 LOC105371267A0A1B0GV96 52 aa2.09□□□□□ -2.07
VMP1-205ENST00000587470 CRYGAP11844 174 aa2.09□□□□□ -2.07
VMP1-205ENST00000587470 MP68P56378 58 aa2.09□□□□□ -2.07
VMP1-205ENST00000587470 ELOF1P60002 83 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms