RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 TRACP01848 142 aa4.35□□□□□ -1.71
CNOT1-222ENST00000570139 DEFB116Q30KQ4 102 aa4.35□□□□□ -1.71
CNOT1-222ENST00000570139 SDIM1Q6ZPB5 146 aa4.35□□□□□ -1.71
CNOT1-222ENST00000570139 Q8NDZ9 215 aa4.35□□□□□ -1.71
CNOT1-222ENST00000570139 IGKV2-24A0A0C4DH68 120 aa4.34□□□□□ -1.71
CNOT1-222ENST00000570139 TCL1BO95988 128 aa4.34□□□□□ -1.71
CNOT1-222ENST00000570139 SPACA4Q8TDM5 124 aa4.34□□□□□ -1.71
CNOT1-222ENST00000570139 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
CNOT1-222ENST00000570139 KCNQ1DNQ9H478 68 aa4.34□□□□□ -1.71
CNOT1-222ENST00000570139 C22orf24Q9Y442 160 aa4.34□□□□□ -1.71
CNOT1-222ENST00000570139 FRAS1Q86XX4 4008 aa4.34□□□□□ -1.71
CNOT1-222ENST00000570139 DNAH2Q9P225 4427 aa4.34□□□□□ -1.72
CNOT1-222ENST00000570139 KMT2AQ03164 3969 aa4.33□□□□□ -1.72
CNOT1-222ENST00000570139 HECTD4Q9Y4D8 3996 aa4.33□□□□□ -1.72
CNOT1-222ENST00000570139 H3BMG7 143 aa4.33□□□□□ -1.72
CNOT1-222ENST00000570139 H3BT86 120 aa4.33□□□□□ -1.72
CNOT1-222ENST00000570139 SLC25A20O43772 301 aa4.33□□□□□ -1.72
CNOT1-222ENST00000570139 FAM19A5Q7Z5A7 132 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-222ENST00000570139 INAFM2P0DMQ5 153 aa4.32□□□□□ -1.72
CNOT1-222ENST00000570139 COX7BP24311 80 aa4.32□□□□□ -1.72
CNOT1-222ENST00000570139 ELOF1P60002 83 aaKnown RBP4.32□□□□□ -1.72
CNOT1-222ENST00000570139 OCIAD2Q56VL3 154 aa4.32□□□□□ -1.72
CNOT1-222ENST00000570139 LINC01600Q96MT4 127 aa4.32□□□□□ -1.72
CNOT1-222ENST00000570139 LINC00167Q96N53 147 aa4.32□□□□□ -1.72
CNOT1-222ENST00000570139 ANAPC13Q9BS18 74 aa4.32□□□□□ -1.72
CNOT1-222ENST00000570139 SPRR1AP35321 89 aa4.31□□□□□ -1.72
CNOT1-222ENST00000570139 CLEC2BQ92478 149 aa4.31□□□□□ -1.72
CNOT1-222ENST00000570139 HYDINQ4G0P3 5121 aa4.31□□□□□ -1.72
CNOT1-222ENST00000570139 DNAH17Q9UFH2 4485 aa4.3□□□□□ -1.72
CNOT1-222ENST00000570139 ETDCA0A1B0GVM5 59 aa4.3□□□□□ -1.72
CNOT1-222ENST00000570139 hADV29S1A0JD25 119 aa4.3□□□□□ -1.72
CNOT1-222ENST00000570139 C9JAW5 83 aa4.3□□□□□ -1.72
CNOT1-222ENST00000570139 UBE2BP63146 152 aa4.3□□□□□ -1.72
CNOT1-222ENST00000570139 LINC00575Q6W349 94 aa4.3□□□□□ -1.72
CNOT1-222ENST00000570139 PLAC8Q9NZF1 115 aa4.3□□□□□ -1.72
CNOT1-222ENST00000570139 RBM12B-AS1Q9P1G2 102 aa4.3□□□□□ -1.72
CNOT1-222ENST00000570139 BIRC6Q9NR09 4857 aa4.3□□□□□ -1.72
CNOT1-222ENST00000570139 A0A1W2PNN7 141 aa4.29□□□□□ -1.72
CNOT1-222ENST00000570139 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-222ENST00000570139 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-222ENST00000570139 Q6ZRX8 168 aa4.29□□□□□ -1.72
CNOT1-222ENST00000570139 ANKRD29Q8N6D5 301 aa4.29□□□□□ -1.72
CNOT1-222ENST00000570139 PPDPFLQ8WWR9 84 aa4.29□□□□□ -1.72
CNOT1-222ENST00000570139 DPH3Q96FX2 82 aa4.29□□□□□ -1.72
CNOT1-222ENST00000570139 ORMDL1Q9P0S3 153 aa4.29□□□□□ -1.72
CNOT1-222ENST00000570139 PRO0461Q9UI25 63 aa4.29□□□□□ -1.72
CNOT1-222ENST00000570139 TMEM256-PLSCR3K7ERE1 68 aa4.28□□□□□ -1.72
CNOT1-222ENST00000570139 C4orf26Q17RF5 130 aa4.28□□□□□ -1.72
CNOT1-222ENST00000570139 TEN1Q86WV5 123 aa4.28□□□□□ -1.72
CNOT1-222ENST00000570139 CIRBP-AS1Q8TBR5 109 aa4.28□□□□□ -1.72
CNOT1-222ENST00000570139 J3QR89 54 aa4.27□□□□□ -1.73
CNOT1-222ENST00000570139 Q6ZSA8 131 aa4.27□□□□□ -1.73
CNOT1-222ENST00000570139 RYR2Q92736 4967 aa4.26□□□□□ -1.73
CNOT1-222ENST00000570139 LUZP6Q538Z0 58 aa4.26□□□□□ -1.73
CNOT1-222ENST00000570139 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
CNOT1-222ENST00000570139 Q5W150 140 aa4.26□□□□□ -1.73
CNOT1-222ENST00000570139 PHF5AQ7RTV0 110 aaKnown RBP4.26□□□□□ -1.73
CNOT1-222ENST00000570139 PKD1P98161 4303 aa4.26□□□□□ -1.73
CNOT1-222ENST00000570139 SACSQ9NZJ4 4579 aa4.26□□□□□ -1.73
CNOT1-222ENST00000570139 C8orf87E5RJ46 101 aa4.25□□□□□ -1.73
CNOT1-222ENST00000570139 JMJD7-PLA2G4BH0Y9G9 81 aa4.25□□□□□ -1.73
CNOT1-222ENST00000570139 K7ERU9 68 aa4.25□□□□□ -1.73
CNOT1-222ENST00000570139 BCE1O60756 84 aa4.25□□□□□ -1.73
CNOT1-222ENST00000570139 BAALC-AS2P0C853 105 aa4.25□□□□□ -1.73
CNOT1-222ENST00000570139 Q6ZQY7 126 aa4.25□□□□□ -1.73
CNOT1-222ENST00000570139 ANAPC11Q9NYG5 84 aa4.25□□□□□ -1.73
CNOT1-222ENST00000570139 FAT2Q9NYQ8 4349 aa4.25□□□□□ -1.73
CNOT1-222ENST00000570139 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
CNOT1-222ENST00000570139 ETDBQ3ZM63 59 aa4.24□□□□□ -1.73
CNOT1-222ENST00000570139 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
CNOT1-222ENST00000570139 A0A1B0GVY2 172 aa4.23□□□□□ -1.73
CNOT1-222ENST00000570139 ZNF706Q9Y5V0 76 aaPredicted RBP4.23□□□□□ -1.73
CNOT1-222ENST00000570139 IGLV5-48A0A075B6I7 105 aa4.22□□□□□ -1.73
CNOT1-222ENST00000570139 PDE6GP18545 87 aa4.22□□□□□ -1.73
CNOT1-222ENST00000570139 OBSCN-AS1Q96MR7 158 aa4.22□□□□□ -1.73
CNOT1-222ENST00000570139 Q9BRP9 147 aa4.22□□□□□ -1.73
CNOT1-222ENST00000570139 EPPK1P58107 5090 aaKnown RBP4.21□□□□□ -1.73
CNOT1-222ENST00000570139 TEX49A0A1B0GTD5 131 aa4.21□□□□□ -1.74
CNOT1-222ENST00000570139 MP68P56378 58 aa4.21□□□□□ -1.74
CNOT1-222ENST00000570139 KRTAP10-1P60331 282 aa4.21□□□□□ -1.74
CNOT1-222ENST00000570139 SCXQ7RTU7 201 aa4.21□□□□□ -1.74
CNOT1-222ENST00000570139 KRTAP13-1Q8IUC0 172 aa4.21□□□□□ -1.74
CNOT1-222ENST00000570139 SMCR5Q8TEV8 140 aa4.21□□□□□ -1.74
CNOT1-222ENST00000570139 LAMTOR3Q9UHA4 124 aa4.21□□□□□ -1.74
CNOT1-222ENST00000570139 ACYP1P07311 99 aa4.2□□□□□ -1.74
CNOT1-222ENST00000570139 FUSP35637 526 aaKnown RBP eCLIP4.2□□□□□ -1.74
CNOT1-222ENST00000570139 PRLHP81277 87 aa4.2□□□□□ -1.74
CNOT1-222ENST00000570139 HIGD2AQ9BW72 106 aa4.2□□□□□ -1.74
CNOT1-222ENST00000570139 PSORS1C2Q9UIG4 136 aa4.2□□□□□ -1.74
CNOT1-222ENST00000570139 DNAH5Q8TE73 4624 aa4.2□□□□□ -1.74
CNOT1-222ENST00000570139 DNAH8Q96JB1 4490 aa4.19□□□□□ -1.74
CNOT1-222ENST00000570139 F8WEM9 126 aa4.19□□□□□ -1.74
CNOT1-222ENST00000570139 SPRR1BP22528 89 aa4.19□□□□□ -1.74
CNOT1-222ENST00000570139 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
CNOT1-222ENST00000570139 RBM3P98179 157 aaKnown RBP4.19□□□□□ -1.74
CNOT1-222ENST00000570139 C1orf137Q5JT78 98 aa4.19□□□□□ -1.74
CNOT1-222ENST00000570139 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
CNOT1-222ENST00000570139 DSCR8Q96T75 97 aa4.19□□□□□ -1.74
CNOT1-222ENST00000570139 LOC110117498A0A087WWA1 95 aa4.18□□□□□ -1.74
CNOT1-222ENST00000570139 A0A1B0GW54 56 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms