RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 TSPEAR-AS2P59090 65 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 TPRXLQ17RH7 258 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 C1orf195Q5TG92 126 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 Q5XG85 94 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 GAGE2AQ6NT46 116 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 SFTA2Q6UW10 78 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 ARL17AQ8IVW1 177 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 ANKRD29Q8N6D5 301 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 SMCR5Q8TEV8 140 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 NAA38Q9BRA0 125 aaKnown RBP3.16□□□□□ -1.9
SMAD3-209ENST00000558894 LAMTOR3Q9UHA4 124 aa3.16□□□□□ -1.9
SMAD3-209ENST00000558894 IGKV2D-26A0A0A0MRZ7 120 aa3.15□□□□□ -1.91
SMAD3-209ENST00000558894 ATOX1O00244 68 aa3.15□□□□□ -1.91
SMAD3-209ENST00000558894 TRACP01848 142 aa3.15□□□□□ -1.91
SMAD3-209ENST00000558894 FXYD2P54710 66 aa3.15□□□□□ -1.91
SMAD3-209ENST00000558894 LINC00158P58513 81 aa3.15□□□□□ -1.91
SMAD3-209ENST00000558894 MIR7-3HGQ8N6C7 128 aa3.15□□□□□ -1.91
SMAD3-209ENST00000558894 LINC00337Q8N6G1 96 aa3.15□□□□□ -1.91
SMAD3-209ENST00000558894 IFI27L1Q96BM0 104 aa3.15□□□□□ -1.91
SMAD3-209ENST00000558894 KCNQ1DNQ9H478 68 aa3.15□□□□□ -1.91
SMAD3-209ENST00000558894 NHP2Q9NX24 153 aaKnown RBP3.15□□□□□ -1.91
SMAD3-209ENST00000558894 IGLV7-46A0A075B6I9 117 aa3.14□□□□□ -1.91
SMAD3-209ENST00000558894 MYMXA0A1B0GTQ4 84 aa3.14□□□□□ -1.91
SMAD3-209ENST00000558894 PRYO14603 147 aa3.14□□□□□ -1.91
SMAD3-209ENST00000558894 CD164Q04900 197 aa3.14□□□□□ -1.91
SMAD3-209ENST00000558894 LINC00483Q53H64 154 aa3.14□□□□□ -1.91
SMAD3-209ENST00000558894 HIGD2AQ9BW72 106 aa3.14□□□□□ -1.91
SMAD3-209ENST00000558894 KRTAP4-8Q9BYQ9 185 aa3.14□□□□□ -1.91
SMAD3-209ENST00000558894 TRBV10-3A0A0K0K1G6 114 aa3.13□□□□□ -1.91
SMAD3-209ENST00000558894 J3QQQ9 107 aa3.13□□□□□ -1.91
SMAD3-209ENST00000558894 NCR3O14931 201 aa3.13□□□□□ -1.91
SMAD3-209ENST00000558894 ERC2-IT1O76042 136 aa3.13□□□□□ -1.91
SMAD3-209ENST00000558894 C4orf26Q17RF5 130 aa3.13□□□□□ -1.91
SMAD3-209ENST00000558894 KRTAP13-3Q3SY46 172 aa3.13□□□□□ -1.91
SMAD3-209ENST00000558894 DAND5Q8N907 189 aa3.13□□□□□ -1.91
SMAD3-209ENST00000558894 KRTAP4-1Q9BYQ7 146 aa3.13□□□□□ -1.91
SMAD3-209ENST00000558894 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
SMAD3-209ENST00000558894 H3BT86 120 aa3.12□□□□□ -1.91
SMAD3-209ENST00000558894 SPAG11AQ6PDA7 123 aa3.12□□□□□ -1.91
SMAD3-209ENST00000558894 HRCT1Q6UXD1 115 aa3.12□□□□□ -1.91
SMAD3-209ENST00000558894 Q8NBF4 154 aa3.12□□□□□ -1.91
SMAD3-209ENST00000558894 Q9BRP9 147 aa3.12□□□□□ -1.91
SMAD3-209ENST00000558894 NDUFA12Q9UI09 145 aa3.12□□□□□ -1.91
SMAD3-209ENST00000558894 TRBV10-2A0A0K0K1G8 114 aa3.11□□□□□ -1.91
SMAD3-209ENST00000558894 LEPROTO15243 131 aa3.11□□□□□ -1.91
SMAD3-209ENST00000558894 IGLV6-57P01721 117 aa3.11□□□□□ -1.91
SMAD3-209ENST00000558894 IGKCP01834 107 aa3.11□□□□□ -1.91
SMAD3-209ENST00000558894 ADAMTSL4-AS1Q5T5F5 129 aa3.11□□□□□ -1.91
SMAD3-209ENST00000558894 SOSTDC1Q6X4U4 206 aa3.11□□□□□ -1.91
SMAD3-209ENST00000558894 SMIM26A0A096LP01 95 aa3.1□□□□□ -1.91
SMAD3-209ENST00000558894 FAM236AA0A1B0GUQ0 79 aa3.1□□□□□ -1.91
SMAD3-209ENST00000558894 FAM236BA0A1B0GV22 79 aa3.1□□□□□ -1.91
SMAD3-209ENST00000558894 SLC25A20O43772 301 aa3.1□□□□□ -1.91
SMAD3-209ENST00000558894 ATP5EP56381 51 aaPredicted RBP3.1□□□□□ -1.91
SMAD3-209ENST00000558894 HIST1H4AP62805 103 aaKnown RBP3.1□□□□□ -1.91
SMAD3-209ENST00000558894 ASB16-AS1Q495Z4 193 aa3.1□□□□□ -1.91
SMAD3-209ENST00000558894 Q6ZRX8 168 aa3.1□□□□□ -1.91
SMAD3-209ENST00000558894 FP248Q71RG6 208 aaPredicted RBP3.1□□□□□ -1.91
SMAD3-209ENST00000558894 LINC00643Q86TS7 51 aa3.1□□□□□ -1.91
SMAD3-209ENST00000558894 Q8N377 158 aa3.1□□□□□ -1.91
SMAD3-209ENST00000558894 LITAFQ99732 161 aa3.1□□□□□ -1.91
SMAD3-209ENST00000558894 ZNF706Q9Y5V0 76 aaPredicted RBP3.1□□□□□ -1.91
SMAD3-209ENST00000558894 SERP1Q9Y6X1 66 aa3.1□□□□□ -1.91
SMAD3-209ENST00000558894 A0A0J9YXY3 114 aa3.09□□□□□ -1.91
SMAD3-209ENST00000558894 A0A0U1RQV1 116 aa3.09□□□□□ -1.91
SMAD3-209ENST00000558894 ETDCA0A1B0GVM5 59 aa3.09□□□□□ -1.91
SMAD3-209ENST00000558894 KRTAP23-1A1A580 65 aa3.09□□□□□ -1.91
SMAD3-209ENST00000558894 SPINK1P00995 79 aa3.09□□□□□ -1.91
SMAD3-209ENST00000558894 PLNP26678 52 aa3.09□□□□□ -1.91
SMAD3-209ENST00000558894 PSMB2P49721 201 aa3.09□□□□□ -1.91
SMAD3-209ENST00000558894 NPC2P61916 151 aa3.09□□□□□ -1.91
SMAD3-209ENST00000558894 RPS29P62273 56 aaKnown RBP3.09□□□□□ -1.91
SMAD3-209ENST00000558894 HIST1H4GQ99525 98 aa3.09□□□□□ -1.91
SMAD3-209ENST00000558894 NEBP20929 6669 aa3.08□□□□□ -1.92
SMAD3-209ENST00000558894 FAM236DA0A1B0GTK5 79 aa3.08□□□□□ -1.92
SMAD3-209ENST00000558894 K7ERJ3 54 aa3.08□□□□□ -1.92
SMAD3-209ENST00000558894 FAM236CP0DP71 79 aa3.08□□□□□ -1.92
SMAD3-209ENST00000558894 PMAIP1Q13794 54 aa3.08□□□□□ -1.92
SMAD3-209ENST00000558894 ATXN8Q156A1 80 aa3.08□□□□□ -1.92
SMAD3-209ENST00000558894 SSBP3-AS1Q7Z2R9 100 aa3.08□□□□□ -1.92
SMAD3-209ENST00000558894 PCP2Q8IVA1 136 aa3.08□□□□□ -1.92
SMAD3-209ENST00000558894 SERP2Q8N6R1 65 aa3.08□□□□□ -1.92
SMAD3-209ENST00000558894 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
SMAD3-209ENST00000558894 IGLV9-49A0A0B4J1Y8 123 aa3.07□□□□□ -1.92
SMAD3-209ENST00000558894 TCL1BO95988 128 aa3.07□□□□□ -1.92
SMAD3-209ENST00000558894 MOBPQ13875 183 aa3.07□□□□□ -1.92
SMAD3-209ENST00000558894 KRTAP19-2Q3LHN2 52 aa3.07□□□□□ -1.92
SMAD3-209ENST00000558894 ST20-AS1Q8NBB2 130 aa3.07□□□□□ -1.92
SMAD3-209ENST00000558894 TRAV23DV6A0A075B6W5 121 aa3.06□□□□□ -1.92
SMAD3-209ENST00000558894 TRBV7-6A0A0J9YX20 115 aa3.06□□□□□ -1.92
SMAD3-209ENST00000558894 ZNF73O43830 326 aaPredicted RBP3.06□□□□□ -1.92
SMAD3-209ENST00000558894 LGALS3P17931 250 aaKnown RBP3.06□□□□□ -1.92
SMAD3-209ENST00000558894 SPRR1BP22528 89 aa3.06□□□□□ -1.92
SMAD3-209ENST00000558894 PRR15Q8IV56 129 aa3.06□□□□□ -1.92
SMAD3-209ENST00000558894 A0A0B4J2C4 111 aa3.05□□□□□ -1.92
SMAD3-209ENST00000558894 LINC00308Q8TCZ7 52 aa3.05□□□□□ -1.92
SMAD3-209ENST00000558894 TTTY13Q9BZ97 58 aa3.05□□□□□ -1.92
SMAD3-209ENST00000558894 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
SMAD3-209ENST00000558894 USH2AO75445 5202 aa3.05□□□□□ -1.92
SMAD3-209ENST00000558894 hADV29S1A0JD25 119 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms