RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 KAAG1Q9UBP8 84 aa1.17□□□□□ -2.22
CALCOCO2-220ENST00000511816 USF3Q68DE3 2245 aa1.16□□□□□ -2.22
CALCOCO2-220ENST00000511816 H3BUA1 57 aa1.16□□□□□ -2.22
CALCOCO2-220ENST00000511816 TENM1Q9UKZ4 2725 aa1.16□□□□□ -2.22
CALCOCO2-220ENST00000511816 C2CD3Q4AC94 2353 aa1.14□□□□□ -2.23
CALCOCO2-220ENST00000511816 REV3LO60673 3130 aa1.13□□□□□ -2.23
CALCOCO2-220ENST00000511816 DEFB109BQ30KR1 87 aa1.13□□□□□ -2.23
CALCOCO2-220ENST00000511816 WNK2Q9Y3S1 2297 aa1.13□□□□□ -2.23
CALCOCO2-220ENST00000511816 PRLHP81277 87 aa1.12□□□□□ -2.23
CALCOCO2-220ENST00000511816 DEFB106AQ8N104 65 aa1.12□□□□□ -2.23
CALCOCO2-220ENST00000511816 MEGF8Q7Z7M0 2845 aa1.12□□□□□ -2.23
CALCOCO2-220ENST00000511816 SPTBN2O15020 2390 aa1.12□□□□□ -2.23
CALCOCO2-220ENST00000511816 IGLV5-48A0A075B6I7 105 aa1.11□□□□□ -2.23
CALCOCO2-220ENST00000511816 DEFB131AP59861 70 aa1.11□□□□□ -2.23
CALCOCO2-220ENST00000511816 S4R3F8 94 aa1.11□□□□□ -2.23
CALCOCO2-220ENST00000511816 ZNF292O60281 2723 aa1.11□□□□□ -2.23
CALCOCO2-220ENST00000511816 CACNA1HO95180 2353 aa1.1□□□□□ -2.23
CALCOCO2-220ENST00000511816 TTC28Q96AY4 2481 aa1.1□□□□□ -2.23
CALCOCO2-220ENST00000511816 POLQO75417 2590 aa1.09□□□□□ -2.23
CALCOCO2-220ENST00000511816 CHD9Q3L8U1 2897 aa1.09□□□□□ -2.23
CALCOCO2-220ENST00000511816 TRANK1O15050 2925 aa1.09□□□□□ -2.23
CALCOCO2-220ENST00000511816 MMP24-AS1A0A0U1RRL7 71 aa1.08□□□□□ -2.24
CALCOCO2-220ENST00000511816 SPTBN1Q01082 2364 aaKnown RBP1.07□□□□□ -2.24
CALCOCO2-220ENST00000511816 PKDREJQ9NTG1 2253 aa1.06□□□□□ -2.24
CALCOCO2-220ENST00000511816 DSPP15924 2871 aaKnown RBP1.06□□□□□ -2.24
CALCOCO2-220ENST00000511816 RPL39P62891 51 aaKnown RBP1.05□□□□□ -2.24
CALCOCO2-220ENST00000511816 NOP10Q9NPE3 64 aaKnown RBP1.05□□□□□ -2.24
CALCOCO2-220ENST00000511816 IGF2RP11717 2491 aa1.05□□□□□ -2.24
CALCOCO2-220ENST00000511816 TPRP12270 2363 aaKnown RBP1.04□□□□□ -2.24
CALCOCO2-220ENST00000511816 POLR2KP53803 58 aaKnown RBP1.04□□□□□ -2.24
CALCOCO2-220ENST00000511816 GVINP1Q7Z2Y8 2422 aa1.04□□□□□ -2.24
CALCOCO2-220ENST00000511816 KNL1Q8NG31 2342 aa1.03□□□□□ -2.24
CALCOCO2-220ENST00000511816 ARHGAP5-AS1Q96IT6 56 aa1.03□□□□□ -2.24
CALCOCO2-220ENST00000511816 H0YGG7 62 aa1.02□□□□□ -2.25
CALCOCO2-220ENST00000511816 ABCA12Q86UK0 2595 aa1.02□□□□□ -2.25
CALCOCO2-220ENST00000511816 ABCA2Q9BZC7 2435 aa1.02□□□□□ -2.25
CALCOCO2-220ENST00000511816 CELSR2Q9HCU4 2923 aa1.01□□□□□ -2.25
CALCOCO2-220ENST00000511816 RPL39LQ96EH5 51 aaKnown RBP1.01□□□□□ -2.25
CALCOCO2-220ENST00000511816 PCNX1Q96RV3 2341 aa1.01□□□□□ -2.25
CALCOCO2-220ENST00000511816 SPINK1P00995 79 aa1□□□□□ -2.25
CALCOCO2-220ENST00000511816 SPINK6Q6UWN8 80 aa1□□□□□ -2.25
CALCOCO2-220ENST00000511816 PDE4DIPQ5VU43 2346 aa1□□□□□ -2.25
CALCOCO2-220ENST00000511816 DEFB135Q30KP9 77 aa0.99□□□□□ -2.25
CALCOCO2-220ENST00000511816 F8P00451 2351 aa0.99□□□□□ -2.25
CALCOCO2-220ENST00000511816 PIEZO1Q92508 2521 aa0.98□□□□□ -2.25
CALCOCO2-220ENST00000511816 M0QY20 66 aa0.98□□□□□ -2.25
CALCOCO2-220ENST00000511816 AKAP13Q12802 2813 aa0.97□□□□□ -2.25
CALCOCO2-220ENST00000511816 TENM4Q6N022 2769 aa0.96□□□□□ -2.26
CALCOCO2-220ENST00000511816 LEAP2Q969E1 77 aa0.96□□□□□ -2.26
CALCOCO2-220ENST00000511816 A0A0C4DFX4 3053 aa0.96□□□□□ -2.26
CALCOCO2-220ENST00000511816 BDP1A6H8Y1 2624 aa0.96□□□□□ -2.26
CALCOCO2-220ENST00000511816 CSPG4Q6UVK1 2322 aa0.95□□□□□ -2.26
CALCOCO2-220ENST00000511816 PRRC2CQ9Y520 2896 aaKnown RBP0.95□□□□□ -2.26
CALCOCO2-220ENST00000511816 M0R2T5 61 aa0.95□□□□□ -2.26
CALCOCO2-220ENST00000511816 TTTY10Q9BZA0 68 aa0.95□□□□□ -2.26
CALCOCO2-220ENST00000511816 A8MTW9 85 aa0.94□□□□□ -2.26
CALCOCO2-220ENST00000511816 CLPSL2Q6UWE3 100 aa0.94□□□□□ -2.26
CALCOCO2-220ENST00000511816 ATRQ13535 2644 aa0.94□□□□□ -2.26
CALCOCO2-220ENST00000511816 AKAP6Q13023 2319 aa0.93□□□□□ -2.26
CALCOCO2-220ENST00000511816 TOMM7Q9P0U1 55 aa0.93□□□□□ -2.26
CALCOCO2-220ENST00000511816 CSMD3Q7Z407 3707 aa0.92□□□□□ -2.26
CALCOCO2-220ENST00000511816 SMR3AQ99954 134 aa0.92□□□□□ -2.26
CALCOCO2-220ENST00000511816 CHD6Q8TD26 2715 aa0.92□□□□□ -2.26
CALCOCO2-220ENST00000511816 VWFP04275 2813 aa0.92□□□□□ -2.26
CALCOCO2-220ENST00000511816 HECTD1Q9ULT8 2610 aa0.91□□□□□ -2.26
CALCOCO2-220ENST00000511816 CEP290O15078 2479 aa0.91□□□□□ -2.26
CALCOCO2-220ENST00000511816 ANK2Q01484 3957 aa0.9□□□□□ -2.26
CALCOCO2-220ENST00000511816 OTOGQ6ZRI0 2925 aa0.9□□□□□ -2.26
CALCOCO2-220ENST00000511816 U3KQA8 63 aa0.9□□□□□ -2.27
CALCOCO2-220ENST00000511816 NOTCH1P46531 2555 aa0.89□□□□□ -2.27
CALCOCO2-220ENST00000511816 LINC01590Q5TEZ4 76 aa0.89□□□□□ -2.27
CALCOCO2-220ENST00000511816 SPTA1P02549 2419 aa0.88□□□□□ -2.27
CALCOCO2-220ENST00000511816 FBN2P35556 2912 aa0.88□□□□□ -2.27
CALCOCO2-220ENST00000511816 M0QZ58 72 aa0.88□□□□□ -2.27
CALCOCO2-220ENST00000511816 MUC5BQ9HC84 5762 aaPredicted RBP0.87□□□□□ -2.27
CALCOCO2-220ENST00000511816 H3BSH0 61 aa0.87□□□□□ -2.27
CALCOCO2-220ENST00000511816 PRCDQ00LT1 54 aa0.87□□□□□ -2.27
CALCOCO2-220ENST00000511816 KRTAP19-3Q7Z4W3 81 aa0.87□□□□□ -2.27
CALCOCO2-220ENST00000511816 CELSR1Q9NYQ6 3014 aa0.87□□□□□ -2.27
CALCOCO2-220ENST00000511816 PKD1L2Q7Z442 2459 aa0.87□□□□□ -2.27
CALCOCO2-220ENST00000511816 SRRM2Q9UQ35 2752 aaKnown RBP0.86□□□□□ -2.27
CALCOCO2-220ENST00000511816 KRTAP2-3P0C7H8 128 aa0.86□□□□□ -2.27
CALCOCO2-220ENST00000511816 KRTAP2-4Q9BYR9 128 aa0.86□□□□□ -2.27
CALCOCO2-220ENST00000511816 KRTAP2-1Q9BYU5 128 aa0.86□□□□□ -2.27
CALCOCO2-220ENST00000511816 TNRC18O15417 2968 aaPredicted RBP0.86□□□□□ -2.27
CALCOCO2-220ENST00000511816 CREBBPQ92793 2442 aa0.86□□□□□ -2.27
CALCOCO2-220ENST00000511816 APCP25054 2843 aa0.85□□□□□ -2.27
CALCOCO2-220ENST00000511816 C9orf92A6NGG3 77 aa0.84□□□□□ -2.27
CALCOCO2-220ENST00000511816 UBR5O95071 2799 aaPredicted RBP0.83□□□□□ -2.28
CALCOCO2-220ENST00000511816 EP300Q09472 2414 aaPredicted RBP0.83□□□□□ -2.28
CALCOCO2-220ENST00000511816 H3BNG1 76 aa0.82□□□□□ -2.28
CALCOCO2-220ENST00000511816 PRM1P04553 51 aa0.82□□□□□ -2.28
CALCOCO2-220ENST00000511816 TNP1P09430 55 aa0.82□□□□□ -2.28
CALCOCO2-220ENST00000511816 DEFB104AQ8WTQ1 72 aa0.82□□□□□ -2.28
CALCOCO2-220ENST00000511816 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
CALCOCO2-220ENST00000511816 TNXBP22105 4242 aa0.82□□□□□ -2.28
CALCOCO2-220ENST00000511816 ZNF469Q96JG9 3925 aaPredicted RBP0.82□□□□□ -2.28
CALCOCO2-220ENST00000511816 FRAS1Q86XX4 4008 aa0.81□□□□□ -2.28
CALCOCO2-220ENST00000511816 PRKDCP78527 4128 aaKnown RBP0.81□□□□□ -2.28
CALCOCO2-220ENST00000511816 CHD8Q9HCK8 2581 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 205.9 ms