RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 CHKB-CPT1BH3BT56 60 aa12.17□□□□□ -0.46
LIN54-209ENST00000510557 TENM3Q9P273 2699 aa12.16□□□□□ -0.46
LIN54-209ENST00000510557 SPANXA2-OT1Q8N9U9 137 aa12.16□□□□□ -0.46
LIN54-209ENST00000510557 LINC00208Q96KT6 92 aa12.16□□□□□ -0.46
LIN54-209ENST00000510557 WFDC13Q8IUB5 93 aa12.15□□□□□ -0.46
LIN54-209ENST00000510557 Q8N9P0 234 aaPredicted RBP12.14□□□□□ -0.47
LIN54-209ENST00000510557 KTN1-AS1Q86SY8 53 aa12.13□□□□□ -0.47
LIN54-209ENST00000510557 PRR15LQ9BU68 103 aa12.12□□□□□ -0.47
LIN54-209ENST00000510557 C16orf90A8MZG2 172 aa12.11□□□□□ -0.47
LIN54-209ENST00000510557 CMYA5Q8N3K9 4069 aa12.1□□□□□ -0.47
LIN54-209ENST00000510557 DEFB116Q30KQ4 102 aa12.1□□□□□ -0.47
LIN54-209ENST00000510557 LINC00476Q8WZB0 136 aa12.1□□□□□ -0.47
LIN54-209ENST00000510557 H3BPC8 53 aa12.09□□□□□ -0.47
LIN54-209ENST00000510557 DNAH3Q8TD57 4116 aa12.09□□□□□ -0.47
LIN54-209ENST00000510557 H0Y9P7 68 aa12.08□□□□□ -0.48
LIN54-209ENST00000510557 CNBPP62633 177 aaKnown RBP12.08□□□□□ -0.48
LIN54-209ENST00000510557 DNAH1Q9P2D7 4330 aa12.08□□□□□ -0.48
LIN54-209ENST00000510557 F8P00451 2351 aa12.06□□□□□ -0.48
LIN54-209ENST00000510557 K7EIL1 84 aa12.06□□□□□ -0.48
LIN54-209ENST00000510557 SPTSSBQ8NFR3 76 aa12.06□□□□□ -0.48
LIN54-209ENST00000510557 ATP11AUNQ6ZP68 121 aa12.04□□□□□ -0.48
LIN54-209ENST00000510557 Q75L30 129 aa12.04□□□□□ -0.48
LIN54-209ENST00000510557 A0A096LNI7 61 aa12.03□□□□□ -0.48
LIN54-209ENST00000510557 KRTAP29-1A8MX34 341 aaPredicted RBP12.03□□□□□ -0.48
LIN54-209ENST00000510557 IGFL1Q6UW32 110 aa12.03□□□□□ -0.48
LIN54-209ENST00000510557 IGLV8-61A0A075B6I0 122 aa12.02□□□□□ -0.49
LIN54-209ENST00000510557 C14orf177Q52M58 125 aa12.02□□□□□ -0.49
LIN54-209ENST00000510557 RBM12B-AS1Q9P1G2 102 aa12.02□□□□□ -0.49
LIN54-209ENST00000510557 IGKV2-24A0A0C4DH68 120 aa12.01□□□□□ -0.49
LIN54-209ENST00000510557 A0A0G2JQZ4 141 aa12.01□□□□□ -0.49
LIN54-209ENST00000510557 A0A1W2PNN7 141 aa12.01□□□□□ -0.49
LIN54-209ENST00000510557 FLNBO75369 2602 aaKnown RBP12□□□□□ -0.49
LIN54-209ENST00000510557 A0A087WSZ3 146 aa12□□□□□ -0.49
LIN54-209ENST00000510557 A6NED7 52 aa12□□□□□ -0.49
LIN54-209ENST00000510557 NDUFS5O43920 106 aa12□□□□□ -0.49
LIN54-209ENST00000510557 CASC2Q6XLA1 102 aa12□□□□□ -0.49
LIN54-209ENST00000510557 LCA10Q71F78 164 aa12□□□□□ -0.49
LIN54-209ENST00000510557 STAB1Q9NY15 2570 aa11.99□□□□□ -0.49
LIN54-209ENST00000510557 FBN1P35555 2871 aaKnown RBP11.99□□□□□ -0.49
LIN54-209ENST00000510557 RPL37AP61513 92 aaKnown RBP11.99□□□□□ -0.49
LIN54-209ENST00000510557 LOC101927531A0A1B0GV80 90 aa11.98□□□□□ -0.49
LIN54-209ENST00000510557 PRLHP81277 87 aa11.98□□□□□ -0.49
LIN54-209ENST00000510557 C9orf163Q8N9P6 203 aa11.98□□□□□ -0.49
LIN54-209ENST00000510557 UBE2DNLQ8IWF7 75 aa11.97□□□□□ -0.49
LIN54-209ENST00000510557 KRTAP1-5Q9BYS1 174 aa11.96□□□□□ -0.49
LIN54-209ENST00000510557 MAST4O15021 2626 aa11.96□□□□□ -0.5
LIN54-209ENST00000510557 COA5Q86WW8 74 aa11.95□□□□□ -0.5
LIN54-209ENST00000510557 H0Y9J4 135 aa11.95□□□□□ -0.5
LIN54-209ENST00000510557 A6NN06 94 aa11.94□□□□□ -0.5
LIN54-209ENST00000510557 HUWE1Q7Z6Z7 4374 aaKnown RBP11.93□□□□□ -0.5
LIN54-209ENST00000510557 PHF5AQ7RTV0 110 aaKnown RBP11.93□□□□□ -0.5
LIN54-209ENST00000510557 CDC42SE1Q9NRR8 79 aa11.92□□□□□ -0.5
LIN54-209ENST00000510557 SPRR1BP22528 89 aa11.9□□□□□ -0.5
LIN54-209ENST00000510557 APLNQ9ULZ1 77 aa11.89□□□□□ -0.51
LIN54-209ENST00000510557 IGLV7-46A0A075B6I9 117 aa11.89□□□□□ -0.51
LIN54-209ENST00000510557 NOTCH1P46531 2555 aa11.88□□□□□ -0.51
LIN54-209ENST00000510557 A8MWP4 228 aa11.88□□□□□ -0.51
LIN54-209ENST00000510557 BAHCC1Q9P281 2608 aa11.85□□□□□ -0.51
LIN54-209ENST00000510557 C7orf65Q6ZTY9 151 aa11.84□□□□□ -0.51
LIN54-209ENST00000510557 CHTF8P0CG12 524 aa11.83□□□□□ -0.52
LIN54-209ENST00000510557 LINC01558Q9Y6Z2 57 aa11.82□□□□□ -0.52
LIN54-209ENST00000510557 LINC00472Q9H8W2 130 aa11.8□□□□□ -0.52
LIN54-209ENST00000510557 KRTAP11-1Q8IUC1 163 aa11.8□□□□□ -0.52
LIN54-209ENST00000510557 MOBPQ13875 183 aa11.79□□□□□ -0.52
LIN54-209ENST00000510557 PLAC8Q9NZF1 115 aa11.79□□□□□ -0.52
LIN54-209ENST00000510557 SPAG11AQ6PDA7 123 aa11.77□□□□□ -0.52
LIN54-209ENST00000510557 MMP24-AS1A0A0U1RRL7 71 aa11.76□□□□□ -0.53
LIN54-209ENST00000510557 PCOTHQ58A44 107 aa11.76□□□□□ -0.53
LIN54-209ENST00000510557 NBEAL1Q6ZS30 2694 aa11.76□□□□□ -0.53
LIN54-209ENST00000510557 NBDYA0A0U1RRE5 68 aa11.75□□□□□ -0.53
LIN54-209ENST00000510557 DNAH10Q8IVF4 4471 aa11.73□□□□□ -0.53
LIN54-209ENST00000510557 COL6A5A8TX70 2615 aa11.71□□□□□ -0.54
LIN54-209ENST00000510557 NUPR2A6NF83 97 aa11.71□□□□□ -0.54
LIN54-209ENST00000510557 DNAH9Q9NYC9 4486 aa11.7□□□□□ -0.54
LIN54-209ENST00000510557 KRTAP13-1Q8IUC0 172 aa11.7□□□□□ -0.54
LIN54-209ENST00000510557 TP53AIP1Q9HCN2 124 aa11.7□□□□□ -0.54
LIN54-209ENST00000510557 SPINK7P58062 85 aa11.68□□□□□ -0.54
LIN54-209ENST00000510557 MDFIQ99750 246 aa11.67□□□□□ -0.54
LIN54-209ENST00000510557 Q6ZRN7 208 aaPredicted RBP11.67□□□□□ -0.54
LIN54-209ENST00000510557 LYSTQ99698 3801 aa11.64□□□□□ -0.55
LIN54-209ENST00000510557 Q6ZR54 194 aa11.63□□□□□ -0.55
LIN54-209ENST00000510557 SPACA4Q8TDM5 124 aa11.63□□□□□ -0.55
LIN54-209ENST00000510557 DYNC2H1Q8NCM8 4307 aaKnown RBP11.63□□□□□ -0.55
LIN54-209ENST00000510557 HRES1P13985 223 aa11.63□□□□□ -0.55
LIN54-209ENST00000510557 PANO1I0J062 215 aa11.62□□□□□ -0.55
LIN54-209ENST00000510557 ASB16-AS1Q495Z4 193 aa11.61□□□□□ -0.55
LIN54-209ENST00000510557 ZNF706Q9Y5V0 76 aaPredicted RBP11.61□□□□□ -0.55
LIN54-209ENST00000510557 STAB2Q8WWQ8 2551 aa11.6□□□□□ -0.55
LIN54-209ENST00000510557 LINC00483Q53H64 154 aa11.59□□□□□ -0.55
LIN54-209ENST00000510557 IGLV9-49A0A0B4J1Y8 123 aa11.57□□□□□ -0.56
LIN54-209ENST00000510557 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.57□□□□□ -0.56
LIN54-209ENST00000510557 MGAM2Q2M2H8 2515 aa11.57□□□□□ -0.56
LIN54-209ENST00000510557 C8orf17Q9NRJ1 99 aa11.56□□□□□ -0.56
LIN54-209ENST00000510557 COL7A1Q02388 2944 aa11.56□□□□□ -0.56
LIN54-209ENST00000510557 A0A087WTM6 91 aa11.53□□□□□ -0.56
LIN54-209ENST00000510557 Q96NJ1 140 aa11.53□□□□□ -0.56
LIN54-209ENST00000510557 C8orf87E5RJ46 101 aa11.52□□□□□ -0.56
LIN54-209ENST00000510557 LINC00313P59037 77 aa11.51□□□□□ -0.57
LIN54-209ENST00000510557 TENM2Q9NT68 2774 aa11.51□□□□□ -0.57
LIN54-209ENST00000510557 IGLV5-52A0A0A0MRZ9 124 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms