RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 LINC00588Q9Y4M8 146 aa8.63□□□□□ -1.03
PTPRE-204ENST00000455661 NOTCH2Q04721 2471 aa8.61□□□□□ -1.03
PTPRE-204ENST00000455661 A8MWP4 228 aa8.6□□□□□ -1.03
PTPRE-204ENST00000455661 KRTAP10-11P60412 298 aa8.6□□□□□ -1.03
PTPRE-204ENST00000455661 CNBPP62633 177 aaKnown RBP8.6□□□□□ -1.03
PTPRE-204ENST00000455661 PRR15LQ9BU68 103 aa8.6□□□□□ -1.03
PTPRE-204ENST00000455661 C9orf163Q8N9P6 203 aa8.58□□□□□ -1.04
PTPRE-204ENST00000455661 ITPR2Q14571 2701 aa8.56□□□□□ -1.04
PTPRE-204ENST00000455661 IGKV2-24A0A0C4DH68 120 aa8.56□□□□□ -1.04
PTPRE-204ENST00000455661 A8MU10 97 aa8.56□□□□□ -1.04
PTPRE-204ENST00000455661 LINC00472Q9H8W2 130 aa8.56□□□□□ -1.04
PTPRE-204ENST00000455661 C16orf90A8MZG2 172 aa8.55□□□□□ -1.04
PTPRE-204ENST00000455661 TENM1Q9UKZ4 2725 aa8.55□□□□□ -1.04
PTPRE-204ENST00000455661 A0A096LNI7 61 aa8.55□□□□□ -1.04
PTPRE-204ENST00000455661 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
PTPRE-204ENST00000455661 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
PTPRE-204ENST00000455661 PKD1L1Q8TDX9 2849 aa8.55□□□□□ -1.04
PTPRE-204ENST00000455661 H0Y9J4 135 aa8.54□□□□□ -1.04
PTPRE-204ENST00000455661 CD164Q04900 197 aa8.53□□□□□ -1.04
PTPRE-204ENST00000455661 COA5Q86WW8 74 aa8.53□□□□□ -1.04
PTPRE-204ENST00000455661 TENM4Q6N022 2769 aa8.53□□□□□ -1.04
PTPRE-204ENST00000455661 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
PTPRE-204ENST00000455661 SPRR1BP22528 89 aa8.53□□□□□ -1.04
PTPRE-204ENST00000455661 Q75L30 129 aa8.53□□□□□ -1.04
PTPRE-204ENST00000455661 TRRAPQ9Y4A5 3859 aa8.52□□□□□ -1.04
PTPRE-204ENST00000455661 J3QKU1 62 aa8.52□□□□□ -1.05
PTPRE-204ENST00000455661 LCE2DQ5TA82 110 aaPredicted RBP8.52□□□□□ -1.05
PTPRE-204ENST00000455661 A6NED7 52 aa8.51□□□□□ -1.05
PTPRE-204ENST00000455661 SPTSSBQ8NFR3 76 aa8.51□□□□□ -1.05
PTPRE-204ENST00000455661 LOC101927531A0A1B0GV80 90 aa8.51□□□□□ -1.05
PTPRE-204ENST00000455661 ATP11AUNQ6ZP68 121 aa8.51□□□□□ -1.05
PTPRE-204ENST00000455661 MMP24-AS1A0A0U1RRL7 71 aa8.49□□□□□ -1.05
PTPRE-204ENST00000455661 ATRQ13535 2644 aa8.49□□□□□ -1.05
PTPRE-204ENST00000455661 TEP1Q99973 2627 aaKnown RBP8.49□□□□□ -1.05
PTPRE-204ENST00000455661 KTN1-AS1Q86SY8 53 aa8.48□□□□□ -1.05
PTPRE-204ENST00000455661 F8P00451 2351 aa8.48□□□□□ -1.05
PTPRE-204ENST00000455661 TP53AIP1Q9HCN2 124 aa8.47□□□□□ -1.05
PTPRE-204ENST00000455661 LCA10Q71F78 164 aa8.47□□□□□ -1.05
PTPRE-204ENST00000455661 FASNP49327 2511 aaKnown RBP8.47□□□□□ -1.05
PTPRE-204ENST00000455661 PHF5AQ7RTV0 110 aaKnown RBP8.46□□□□□ -1.05
PTPRE-204ENST00000455661 PCOTHQ58A44 107 aa8.46□□□□□ -1.06
PTPRE-204ENST00000455661 DNAH1Q9P2D7 4330 aa8.45□□□□□ -1.06
PTPRE-204ENST00000455661 NDUFS5O43920 106 aa8.43□□□□□ -1.06
PTPRE-204ENST00000455661 CDC42SE1Q9NRR8 79 aa8.43□□□□□ -1.06
PTPRE-204ENST00000455661 MOBPQ13875 183 aa8.42□□□□□ -1.06
PTPRE-204ENST00000455661 KRTAP11-1Q8IUC1 163 aa8.42□□□□□ -1.06
PTPRE-204ENST00000455661 LINC01558Q9Y6Z2 57 aa8.42□□□□□ -1.06
PTPRE-204ENST00000455661 TENM3Q9P273 2699 aa8.42□□□□□ -1.06
PTPRE-204ENST00000455661 CHTF8P0CG12 524 aa8.4□□□□□ -1.06
PTPRE-204ENST00000455661 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.06
PTPRE-204ENST00000455661 NSD1Q96L73 2696 aaPredicted RBP8.4□□□□□ -1.06
PTPRE-204ENST00000455661 C14orf177Q52M58 125 aa8.4□□□□□ -1.07
PTPRE-204ENST00000455661 A6NN06 94 aa8.38□□□□□ -1.07
PTPRE-204ENST00000455661 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
PTPRE-204ENST00000455661 Q6ZR54 194 aa8.38□□□□□ -1.07
PTPRE-204ENST00000455661 C8orf17Q9NRJ1 99 aa8.38□□□□□ -1.07
PTPRE-204ENST00000455661 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
PTPRE-204ENST00000455661 Q96NJ1 140 aa8.36□□□□□ -1.07
PTPRE-204ENST00000455661 RBM12B-AS1Q9P1G2 102 aa8.36□□□□□ -1.07
PTPRE-204ENST00000455661 BAHCC1Q9P281 2608 aa8.35□□□□□ -1.07
PTPRE-204ENST00000455661 KRTAP1-5Q9BYS1 174 aa8.35□□□□□ -1.07
PTPRE-204ENST00000455661 ANK2Q01484 3957 aa8.35□□□□□ -1.07
PTPRE-204ENST00000455661 IGLV9-49A0A0B4J1Y8 123 aa8.34□□□□□ -1.07
PTPRE-204ENST00000455661 HELZ2Q9BYK8 2649 aaKnown RBP8.34□□□□□ -1.07
PTPRE-204ENST00000455661 KMT2BQ9UMN6 2715 aaPredicted RBP8.34□□□□□ -1.07
PTPRE-204ENST00000455661 OTOGQ6ZRI0 2925 aa8.34□□□□□ -1.07
PTPRE-204ENST00000455661 CDK2AP2O75956 126 aa8.34□□□□□ -1.08
PTPRE-204ENST00000455661 IGHV6-1A0A0B4J1U7 121 aa8.32□□□□□ -1.08
PTPRE-204ENST00000455661 HRES1P13985 223 aa8.32□□□□□ -1.08
PTPRE-204ENST00000455661 A0A1B0GVX0 72 aa8.32□□□□□ -1.08
PTPRE-204ENST00000455661 KRTAP13-1Q8IUC0 172 aa8.31□□□□□ -1.08
PTPRE-204ENST00000455661 UBE2DNLQ8IWF7 75 aa8.31□□□□□ -1.08
PTPRE-204ENST00000455661 MRPL34Q9BQ48 92 aaKnown RBP8.31□□□□□ -1.08
PTPRE-204ENST00000455661 C7orf65Q6ZTY9 151 aa8.3□□□□□ -1.08
PTPRE-204ENST00000455661 FLNBO75369 2602 aaKnown RBP8.28□□□□□ -1.08
PTPRE-204ENST00000455661 SPINK7P58062 85 aa8.28□□□□□ -1.08
PTPRE-204ENST00000455661 SRRM2Q9UQ35 2752 aaKnown RBP8.26□□□□□ -1.09
PTPRE-204ENST00000455661 KRTAP24-1Q3LI83 254 aa8.25□□□□□ -1.09
PTPRE-204ENST00000455661 LINC00483Q53H64 154 aa8.24□□□□□ -1.09
PTPRE-204ENST00000455661 MDFIQ99750 246 aa8.24□□□□□ -1.09
PTPRE-204ENST00000455661 ZNF706Q9Y5V0 76 aaPredicted RBP8.24□□□□□ -1.09
PTPRE-204ENST00000455661 TENM2Q9NT68 2774 aa8.24□□□□□ -1.09
PTPRE-204ENST00000455661 MAST4O15021 2626 aa8.23□□□□□ -1.09
PTPRE-204ENST00000455661 DNAH10Q8IVF4 4471 aa8.23□□□□□ -1.09
PTPRE-204ENST00000455661 CMYA5Q8N3K9 4069 aa8.23□□□□□ -1.09
PTPRE-204ENST00000455661 PANO1I0J062 215 aa8.21□□□□□ -1.1
PTPRE-204ENST00000455661 DNAH3Q8TD57 4116 aa8.2□□□□□ -1.1
PTPRE-204ENST00000455661 HECTD1Q9ULT8 2610 aa8.2□□□□□ -1.1
PTPRE-204ENST00000455661 K7EIL1 84 aa8.19□□□□□ -1.1
PTPRE-204ENST00000455661 PRR26Q8N8Z3 221 aa8.19□□□□□ -1.1
PTPRE-204ENST00000455661 A0A087X002 238 aa8.19□□□□□ -1.1
PTPRE-204ENST00000455661 ACYP2P14621 99 aa8.19□□□□□ -1.1
PTPRE-204ENST00000455661 NOTCH2NLQ7Z3S9 236 aa8.19□□□□□ -1.1
PTPRE-204ENST00000455661 APLNQ9ULZ1 77 aa8.18□□□□□ -1.1
PTPRE-204ENST00000455661 WWC2-AS2Q96NR7 200 aa8.18□□□□□ -1.1
PTPRE-204ENST00000455661 HUWE1Q7Z6Z7 4374 aaKnown RBP8.17□□□□□ -1.1
PTPRE-204ENST00000455661 SPACA4Q8TDM5 124 aa8.16□□□□□ -1.1
PTPRE-204ENST00000455661 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.14□□□□□ -1.11
PTPRE-204ENST00000455661 DNAH9Q9NYC9 4486 aa8.14□□□□□ -1.11
PTPRE-204ENST00000455661 Q5W150 140 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 250.7 ms