RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 RBM3P98179 157 aaKnown RBP2.14□□□□□ -2.07
SBDSP1-204ENST00000453858 RHEBQ15382 184 aa2.14□□□□□ -2.07
SBDSP1-204ENST00000453858 TEX261Q6UWH6 196 aa2.14□□□□□ -2.07
SBDSP1-204ENST00000453858 SIX6O95475 246 aa2.13□□□□□ -2.07
SBDSP1-204ENST00000453858 RPL39P62891 51 aaKnown RBP2.13□□□□□ -2.07
SBDSP1-204ENST00000453858 NEDD8Q15843 81 aa2.13□□□□□ -2.07
SBDSP1-204ENST00000453858 MRPL51Q4U2R6 128 aaKnown RBP2.13□□□□□ -2.07
SBDSP1-204ENST00000453858 ADM2Q7Z4H4 148 aa2.13□□□□□ -2.07
SBDSP1-204ENST00000453858 MIR7-3HGQ8N6C7 128 aa2.13□□□□□ -2.07
SBDSP1-204ENST00000453858 MBD3L1Q8WWY6 194 aa2.13□□□□□ -2.07
SBDSP1-204ENST00000453858 IMUPQ9GZP8 106 aa2.13□□□□□ -2.07
SBDSP1-204ENST00000453858 ST20Q9HBF5 79 aa2.13□□□□□ -2.07
SBDSP1-204ENST00000453858 TOMM7Q9P0U1 55 aa2.13□□□□□ -2.07
SBDSP1-204ENST00000453858 LAMTOR3Q9UHA4 124 aa2.13□□□□□ -2.07
SBDSP1-204ENST00000453858 A0A087WXM4 84 aa2.12□□□□□ -2.07
SBDSP1-204ENST00000453858 J3KT08 172 aa2.12□□□□□ -2.07
SBDSP1-204ENST00000453858 NDUFB6O95139 128 aa2.12□□□□□ -2.07
SBDSP1-204ENST00000453858 TSPEAR-AS2P59090 65 aa2.12□□□□□ -2.07
SBDSP1-204ENST00000453858 HBBP68871 147 aa2.12□□□□□ -2.07
SBDSP1-204ENST00000453858 CCL20P78556 96 aa2.12□□□□□ -2.07
SBDSP1-204ENST00000453858 ALKAL2Q6UX46 152 aa2.12□□□□□ -2.07
SBDSP1-204ENST00000453858 KCNQ1DNQ9H478 68 aa2.12□□□□□ -2.07
SBDSP1-204ENST00000453858 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
SBDSP1-204ENST00000453858 UBE2G1P62253 170 aa2.11□□□□□ -2.07
SBDSP1-204ENST00000453858 SLC25A34Q6PIV7 304 aa2.11□□□□□ -2.07
SBDSP1-204ENST00000453858 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
SBDSP1-204ENST00000453858 Q96NJ1 140 aa2.11□□□□□ -2.07
SBDSP1-204ENST00000453858 SEC22CQ9BRL7 303 aa2.11□□□□□ -2.07
SBDSP1-204ENST00000453858 TRBV24-1A0A075B6N3 115 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 LINC00587B1AMM8 73 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 HIST1H2BOP23527 126 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 HIST1H2BBP33778 126 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 HIST1H2BDP58876 126 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 HIST1H2BCP62807 126 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 HIST2H2BEQ16778 126 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 LYRM7Q5U5X0 104 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 IGFL1Q6UW32 110 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 LCA10Q71F78 164 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 HIST1H2BHQ93079 126 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 ZNF625Q96I27 306 aaPredicted RBP2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 HIST1H2BNQ99877 126 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 HIST1H2BMQ99879 126 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 HSPB8Q9UJY1 196 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 LAMTOR2Q9Y2Q5 125 aa2.1□□□□□ -2.07
SBDSP1-204ENST00000453858 A6NED7 52 aa2.09□□□□□ -2.07
SBDSP1-204ENST00000453858 ZNF73O43830 326 aaPredicted RBP2.09□□□□□ -2.07
SBDSP1-204ENST00000453858 SPRR1BP22528 89 aa2.09□□□□□ -2.07
SBDSP1-204ENST00000453858 BAGE2Q86Y30 109 aa2.09□□□□□ -2.07
SBDSP1-204ENST00000453858 ST20-AS1Q8NBB2 130 aa2.09□□□□□ -2.07
SBDSP1-204ENST00000453858 C2orf88Q9BSF0 95 aa2.09□□□□□ -2.07
SBDSP1-204ENST00000453858 TRAPPC1Q9Y5R8 145 aa2.09□□□□□ -2.07
SBDSP1-204ENST00000453858 A0A1B0GV90 55 aa2.08□□□□□ -2.08
SBDSP1-204ENST00000453858 FCER1GP30273 86 aa2.08□□□□□ -2.08
SBDSP1-204ENST00000453858 FAUP35544 74 aaKnown RBP2.08□□□□□ -2.08
SBDSP1-204ENST00000453858 PRR15Q8IV56 129 aa2.08□□□□□ -2.08
SBDSP1-204ENST00000453858 ETDCA0A1B0GVM5 59 aa2.07□□□□□ -2.08
SBDSP1-204ENST00000453858 A0A1W2PNM2 257 aa2.07□□□□□ -2.08
SBDSP1-204ENST00000453858 LINC00299Q6ZSB3 139 aa2.07□□□□□ -2.08
SBDSP1-204ENST00000453858 VPS25Q9BRG1 176 aa2.07□□□□□ -2.08
SBDSP1-204ENST00000453858 TCEAL7Q9BRU2 100 aa2.07□□□□□ -2.08
SBDSP1-204ENST00000453858 TAX1BP3O14907 124 aa2.06□□□□□ -2.08
SBDSP1-204ENST00000453858 LEPROTO15243 131 aa2.06□□□□□ -2.08
SBDSP1-204ENST00000453858 TRGC2P03986 189 aa2.06□□□□□ -2.08
SBDSP1-204ENST00000453858 HIST1H4AP62805 103 aaKnown RBP2.06□□□□□ -2.08
SBDSP1-204ENST00000453858 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
SBDSP1-204ENST00000453858 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
SBDSP1-204ENST00000453858 CDKN2A-AS1Q9UH64 79 aa2.06□□□□□ -2.08
SBDSP1-204ENST00000453858 A0A0B4J2C4 111 aa2.05□□□□□ -2.08
SBDSP1-204ENST00000453858 C9JAW5 83 aa2.05□□□□□ -2.08
SBDSP1-204ENST00000453858 F8W036 122 aa2.05□□□□□ -2.08
SBDSP1-204ENST00000453858 H3BQ85 93 aa2.05□□□□□ -2.08
SBDSP1-204ENST00000453858 DLEU1O43261 78 aa2.05□□□□□ -2.08
SBDSP1-204ENST00000453858 NPYP01303 97 aa2.05□□□□□ -2.08
SBDSP1-204ENST00000453858 LINC01554Q52M75 96 aa2.05□□□□□ -2.08
SBDSP1-204ENST00000453858 Q6ZRX8 168 aa2.05□□□□□ -2.08
SBDSP1-204ENST00000453858 TOMM5Q8N4H5 51 aa2.05□□□□□ -2.08
SBDSP1-204ENST00000453858 V9GYH0 126 aa2.05□□□□□ -2.08
SBDSP1-204ENST00000453858 CCDC160A6NGH7 325 aa2.04□□□□□ -2.08
SBDSP1-204ENST00000453858 J3QQQ9 107 aa2.04□□□□□ -2.08
SBDSP1-204ENST00000453858 TCTE3Q8IZS6 198 aa2.04□□□□□ -2.08
SBDSP1-204ENST00000453858 AMELXQ99217 191 aa2.04□□□□□ -2.08
SBDSP1-204ENST00000453858 TTTY13Q9BZ97 58 aa2.04□□□□□ -2.08
SBDSP1-204ENST00000453858 SMIM3Q9BZL3 60 aa2.04□□□□□ -2.08
SBDSP1-204ENST00000453858 PRO1933Q9H354 126 aa2.04□□□□□ -2.08
SBDSP1-204ENST00000453858 TRBV7-6A0A0J9YX20 115 aa2.03□□□□□ -2.08
SBDSP1-204ENST00000453858 PYDC2Q56P42 97 aa2.03□□□□□ -2.08
SBDSP1-204ENST00000453858 COX7B2Q8TF08 81 aa2.03□□□□□ -2.08
SBDSP1-204ENST00000453858 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
SBDSP1-204ENST00000453858 PRO2289Q9P1D8 64 aa2.03□□□□□ -2.08
SBDSP1-204ENST00000453858 NAT8BQ9UHF3 227 aa2.03□□□□□ -2.08
SBDSP1-204ENST00000453858 TNFSF18Q9UNG2 199 aa2.03□□□□□ -2.08
SBDSP1-204ENST00000453858 TMEM256-PLSCR3K7ERE1 68 aa2.02□□□□□ -2.09
SBDSP1-204ENST00000453858 DPM2O94777 84 aa2.02□□□□□ -2.09
SBDSP1-204ENST00000453858 TCL1BO95988 128 aa2.02□□□□□ -2.09
SBDSP1-204ENST00000453858 IL7P13232 177 aa2.02□□□□□ -2.09
SBDSP1-204ENST00000453858 S100PP25815 95 aa2.02□□□□□ -2.09
SBDSP1-204ENST00000453858 SERF2P84101 59 aa2.02□□□□□ -2.09
SBDSP1-204ENST00000453858 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms