RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 MT-ATP8P03928 68 aa3.84□□□□□ -1.79
PTPRK-211ENST00000429595 KRTAP1-4P0C5Y4 121 aa3.84□□□□□ -1.79
PTPRK-211ENST00000429595 LINC00167Q96N53 147 aa3.84□□□□□ -1.79
PTPRK-211ENST00000429595 CHCHD5Q9BSY4 110 aa3.84□□□□□ -1.79
PTPRK-211ENST00000429595 SND1-IT1Q9HBX3 110 aa3.84□□□□□ -1.79
PTPRK-211ENST00000429595 DNAH8Q96JB1 4490 aa3.83□□□□□ -1.8
PTPRK-211ENST00000429595 IGLV4-60A0A075B6I1 120 aa3.83□□□□□ -1.8
PTPRK-211ENST00000429595 IGKV2-28A0A075B6P5 120 aa3.83□□□□□ -1.8
PTPRK-211ENST00000429595 F8WDY8 70 aa3.83□□□□□ -1.8
PTPRK-211ENST00000429595 IGKV2D-28P01615 120 aa3.83□□□□□ -1.8
PTPRK-211ENST00000429595 CRPP02741 224 aa3.83□□□□□ -1.8
PTPRK-211ENST00000429595 BAALC-AS2P0C853 105 aa3.83□□□□□ -1.8
PTPRK-211ENST00000429595 KIAA0087Q14695 138 aa3.83□□□□□ -1.8
PTPRK-211ENST00000429595 C6orf226Q5I0X4 101 aa3.83□□□□□ -1.8
PTPRK-211ENST00000429595 LINC00643Q86TS7 51 aa3.83□□□□□ -1.8
PTPRK-211ENST00000429595 MIR7-3HGQ8N6C7 128 aa3.83□□□□□ -1.8
PTPRK-211ENST00000429595 LPAP08519 4548 aa3.83□□□□□ -1.8
PTPRK-211ENST00000429595 GVQW2A0A096LPI5 108 aaPredicted RBP3.82□□□□□ -1.8
PTPRK-211ENST00000429595 SPINK6Q6UWN8 80 aa3.82□□□□□ -1.8
PTPRK-211ENST00000429595 CLEC2BQ92478 149 aa3.82□□□□□ -1.8
PTPRK-211ENST00000429595 TMEM126AQ9H061 195 aa3.82□□□□□ -1.8
PTPRK-211ENST00000429595 C22orf24Q9Y442 160 aa3.82□□□□□ -1.8
PTPRK-211ENST00000429595 IGKV2D-24A0A075B6R9 120 aa3.81□□□□□ -1.8
PTPRK-211ENST00000429595 LINC00158P58513 81 aa3.81□□□□□ -1.8
PTPRK-211ENST00000429595 LINC00337Q8N6G1 96 aa3.81□□□□□ -1.8
PTPRK-211ENST00000429595 TRBV7-6A0A0J9YX20 115 aa3.8□□□□□ -1.8
PTPRK-211ENST00000429595 JMJD7-PLA2G4BH0Y9G9 81 aa3.8□□□□□ -1.8
PTPRK-211ENST00000429595 NDUFV3P56181 108 aaKnown RBP3.8□□□□□ -1.8
PTPRK-211ENST00000429595 C5orf38Q86SI9 138 aa3.8□□□□□ -1.8
PTPRK-211ENST00000429595 SMIM11BQ8TCY0 68 aa3.8□□□□□ -1.8
PTPRK-211ENST00000429595 TMEM256-PLSCR3K7ERE1 68 aa3.79□□□□□ -1.8
PTPRK-211ENST00000429595 DNAL4O96015 105 aa3.79□□□□□ -1.8
PTPRK-211ENST00000429595 NPC2P61916 151 aa3.79□□□□□ -1.8
PTPRK-211ENST00000429595 Q8N377 158 aa3.79□□□□□ -1.8
PTPRK-211ENST00000429595 ANAPC13Q9BS18 74 aa3.79□□□□□ -1.8
PTPRK-211ENST00000429595 IGLV9-49A0A0B4J1Y8 123 aa3.78□□□□□ -1.8
PTPRK-211ENST00000429595 REG3AQ06141 175 aa3.78□□□□□ -1.8
PTPRK-211ENST00000429595 S100A7L2Q5SY68 101 aa3.78□□□□□ -1.8
PTPRK-211ENST00000429595 CFAP161Q6P656 301 aa3.78□□□□□ -1.8
PTPRK-211ENST00000429595 CHCHD10Q8WYQ3 142 aaPredicted RBP3.78□□□□□ -1.8
PTPRK-211ENST00000429595 FAM218AQ96MZ4 157 aa3.78□□□□□ -1.8
PTPRK-211ENST00000429595 TOMM7Q9P0U1 55 aa3.78□□□□□ -1.8
PTPRK-211ENST00000429595 PSORS1C2Q9UIG4 136 aa3.78□□□□□ -1.8
PTPRK-211ENST00000429595 TRBV10-3A0A0K0K1G6 114 aa3.77□□□□□ -1.81
PTPRK-211ENST00000429595 BCE1O60756 84 aa3.77□□□□□ -1.81
PTPRK-211ENST00000429595 PDE6GP18545 87 aa3.77□□□□□ -1.81
PTPRK-211ENST00000429595 LINC00269Q8N2A0 174 aa3.77□□□□□ -1.81
PTPRK-211ENST00000429595 C9orf163Q8N9P6 203 aa3.77□□□□□ -1.81
PTPRK-211ENST00000429595 ORMDL1Q9P0S3 153 aa3.77□□□□□ -1.81
PTPRK-211ENST00000429595 A0A0U1RRA0 63 aa3.76□□□□□ -1.81
PTPRK-211ENST00000429595 IGLV6-57P01721 117 aa3.76□□□□□ -1.81
PTPRK-211ENST00000429595 CCKP06307 115 aa3.76□□□□□ -1.81
PTPRK-211ENST00000429595 PFN2P35080 140 aa3.76□□□□□ -1.81
PTPRK-211ENST00000429595 XCL1P47992 114 aa3.76□□□□□ -1.81
PTPRK-211ENST00000429595 HIST1H4AP62805 103 aaKnown RBP3.76□□□□□ -1.81
PTPRK-211ENST00000429595 PRR3P79522 188 aaKnown RBP3.76□□□□□ -1.81
PTPRK-211ENST00000429595 ATP5EP2Q5VTU8 51 aa3.76□□□□□ -1.81
PTPRK-211ENST00000429595 Q6JHZ5 121 aa3.76□□□□□ -1.81
PTPRK-211ENST00000429595 C2orf48Q96LS8 159 aa3.76□□□□□ -1.81
PTPRK-211ENST00000429595 LINC00575Q6W349 94 aa3.75□□□□□ -1.81
PTPRK-211ENST00000429595 LOC110117498A0A087WWA1 95 aa3.74□□□□□ -1.81
PTPRK-211ENST00000429595 ANGP03950 147 aaKnown RBP3.74□□□□□ -1.81
PTPRK-211ENST00000429595 ENHOQ6UWT2 76 aa3.74□□□□□ -1.81
PTPRK-211ENST00000429595 OR13C6PQ8NH95 151 aa3.74□□□□□ -1.81
PTPRK-211ENST00000429595 IGKV3OR2-268A0A0C4DH90 116 aa3.73□□□□□ -1.81
PTPRK-211ENST00000429595 A0A1B0GW54 56 aa3.73□□□□□ -1.81
PTPRK-211ENST00000429595 UQCRQO14949 82 aa3.73□□□□□ -1.81
PTPRK-211ENST00000429595 KRTAP26-1Q6PEX3 210 aa3.73□□□□□ -1.81
PTPRK-211ENST00000429595 hADV29S1A0JD25 119 aa3.72□□□□□ -1.81
PTPRK-211ENST00000429595 ATOX1O00244 68 aa3.72□□□□□ -1.81
PTPRK-211ENST00000429595 SPAG11BQ08648 103 aa3.72□□□□□ -1.81
PTPRK-211ENST00000429595 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.72□□□□□ -1.81
PTPRK-211ENST00000429595 SMCR5Q8TEV8 140 aa3.72□□□□□ -1.81
PTPRK-211ENST00000429595 LINC00526Q96FQ7 95 aa3.72□□□□□ -1.81
PTPRK-211ENST00000429595 PLAC8Q9NZF1 115 aa3.72□□□□□ -1.81
PTPRK-211ENST00000429595 KLK12Q9UKR0 248 aa3.72□□□□□ -1.81
PTPRK-211ENST00000429595 TLX1NBP0CAT3 122 aa3.71□□□□□ -1.82
PTPRK-211ENST00000429595 CHTF8P0CG12 524 aa3.71□□□□□ -1.82
PTPRK-211ENST00000429595 CRYGAP11844 174 aa3.71□□□□□ -1.82
PTPRK-211ENST00000429595 GAGE2AQ6NT46 116 aa3.71□□□□□ -1.82
PTPRK-211ENST00000429595 UNQ6190/PRO20217Q6UXQ8 127 aa3.71□□□□□ -1.82
PTPRK-211ENST00000429595 Q6ZRP5 223 aa3.71□□□□□ -1.82
PTPRK-211ENST00000429595 C3orf22Q8N5N4 141 aa3.71□□□□□ -1.82
PTPRK-211ENST00000429595 M0R378 163 aa3.7□□□□□ -1.82
PTPRK-211ENST00000429595 COX7CP15954 63 aa3.7□□□□□ -1.82
PTPRK-211ENST00000429595 RBM3P98179 157 aaKnown RBP3.7□□□□□ -1.82
PTPRK-211ENST00000429595 C6orf99Q4VX62 202 aa3.7□□□□□ -1.82
PTPRK-211ENST00000429595 SPACA4Q8TDM5 124 aa3.7□□□□□ -1.82
PTPRK-211ENST00000429595 LINC00846Q9NV44 126 aa3.7□□□□□ -1.82
PTPRK-211ENST00000429595 NDUFC2-KCTD14E9PQ53 114 aa3.69□□□□□ -1.82
PTPRK-211ENST00000429595 ELOF1P60002 83 aaKnown RBP3.69□□□□□ -1.82
PTPRK-211ENST00000429595 RPS28P62857 69 aaKnown RBP3.69□□□□□ -1.82
PTPRK-211ENST00000429595 RPL18AQ02543 176 aaKnown RBP3.69□□□□□ -1.82
PTPRK-211ENST00000429595 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
PTPRK-211ENST00000429595 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
PTPRK-211ENST00000429595 Q6ZQT0 140 aa3.69□□□□□ -1.82
PTPRK-211ENST00000429595 SMIM20Q8N5G0 67 aa3.69□□□□□ -1.82
PTPRK-211ENST00000429595 C14orf132Q9NPU4 83 aa3.69□□□□□ -1.82
PTPRK-211ENST00000429595 C6orf48Q9UBA6 75 aa3.69□□□□□ -1.82
PTPRK-211ENST00000429595 TRAV23DV6A0A075B6W5 121 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms