RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 NAT8BQ9UHF3 227 aa2.42□□□□□ -2.02
SFXN1-202ENST00000421887 ERG28Q9UKR5 140 aa2.42□□□□□ -2.02
SFXN1-202ENST00000421887 KANTRA0A1W2PQU2 76 aa2.41□□□□□ -2.02
SFXN1-202ENST00000421887 HMSDA8MTL9 139 aa2.41□□□□□ -2.02
SFXN1-202ENST00000421887 H3BRM9 83 aa2.41□□□□□ -2.02
SFXN1-202ENST00000421887 S100A8P05109 93 aa2.41□□□□□ -2.02
SFXN1-202ENST00000421887 SPINK8P0C7L1 97 aa2.41□□□□□ -2.02
SFXN1-202ENST00000421887 G0S2P27469 103 aa2.41□□□□□ -2.02
SFXN1-202ENST00000421887 SLC25A34Q6PIV7 304 aa2.41□□□□□ -2.02
SFXN1-202ENST00000421887 KCNQ1DNQ9H478 68 aa2.41□□□□□ -2.02
SFXN1-202ENST00000421887 H7C2G1 150 aa2.4□□□□□ -2.03
SFXN1-202ENST00000421887 ERC2-IT1O76042 136 aa2.4□□□□□ -2.03
SFXN1-202ENST00000421887 SPRR1AP35321 89 aa2.4□□□□□ -2.03
SFXN1-202ENST00000421887 JOSD1Q15040 202 aaPredicted RBP2.4□□□□□ -2.03
SFXN1-202ENST00000421887 C10orf91Q5T1B1 145 aa2.4□□□□□ -2.03
SFXN1-202ENST00000421887 C1orf195Q5TG92 126 aa2.4□□□□□ -2.03
SFXN1-202ENST00000421887 LINC00299Q6ZSB3 139 aa2.4□□□□□ -2.03
SFXN1-202ENST00000421887 ZNF625Q96I27 306 aaPredicted RBP2.4□□□□□ -2.03
SFXN1-202ENST00000421887 IGIPA6NJ69 53 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 NCR3O14931 201 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 LINC00158P58513 81 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 ZNF345Q14585 488 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 SFTA2Q6UW10 78 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 TMEM136Q6ZRR5 245 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 Q6ZRX8 168 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 ATP5L2Q7Z4Y8 100 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 ST20-AS1Q8NBB2 130 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 Q8NDZ9 215 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 PRELID3AQ96N28 172 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 OSTCQ9NRP0 149 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 TRAPPC1Q9Y5R8 145 aa2.39□□□□□ -2.03
SFXN1-202ENST00000421887 TRBV10-3A0A0K0K1G6 114 aa2.38□□□□□ -2.03
SFXN1-202ENST00000421887 K7EMI3 77 aa2.38□□□□□ -2.03
SFXN1-202ENST00000421887 DDTP30046 118 aa2.38□□□□□ -2.03
SFXN1-202ENST00000421887 SMIM7Q9BQ49 75 aa2.38□□□□□ -2.03
SFXN1-202ENST00000421887 Q9BRP9 147 aa2.38□□□□□ -2.03
SFXN1-202ENST00000421887 LAMTOR3Q9UHA4 124 aa2.38□□□□□ -2.03
SFXN1-202ENST00000421887 BATFQ16520 125 aa2.37□□□□□ -2.03
SFXN1-202ENST00000421887 MRPL54Q6P161 138 aaKnown RBP2.37□□□□□ -2.03
SFXN1-202ENST00000421887 ALKAL2Q6UX46 152 aa2.37□□□□□ -2.03
SFXN1-202ENST00000421887 Q8N8P6 123 aa2.37□□□□□ -2.03
SFXN1-202ENST00000421887 SCGB3A1Q96QR1 104 aa2.37□□□□□ -2.03
SFXN1-202ENST00000421887 PRO1933Q9H354 126 aa2.37□□□□□ -2.03
SFXN1-202ENST00000421887 LAMTOR2Q9Y2Q5 125 aa2.37□□□□□ -2.03
SFXN1-202ENST00000421887 V9GYV3 84 aa2.37□□□□□ -2.03
SFXN1-202ENST00000421887 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
SFXN1-202ENST00000421887 TCL1BO95988 128 aa2.36□□□□□ -2.03
SFXN1-202ENST00000421887 HINT1P49773 126 aaPredicted RBP2.36□□□□□ -2.03
SFXN1-202ENST00000421887 Q5XG85 94 aa2.36□□□□□ -2.03
SFXN1-202ENST00000421887 A6NED7 52 aa2.35□□□□□ -2.03
SFXN1-202ENST00000421887 AKR1D1P51857 326 aa2.35□□□□□ -2.03
SFXN1-202ENST00000421887 TOMM6Q96B49 74 aa2.35□□□□□ -2.03
SFXN1-202ENST00000421887 OBSCN-AS1Q96MR7 158 aa2.35□□□□□ -2.03
SFXN1-202ENST00000421887 NXT2Q9NPJ8 142 aaKnown RBP2.35□□□□□ -2.03
SFXN1-202ENST00000421887 SMIM27A0A1W2PRY6 76 aa2.34□□□□□ -2.03
SFXN1-202ENST00000421887 LINC01549A6NIU2 74 aa2.34□□□□□ -2.03
SFXN1-202ENST00000421887 A6NN06 94 aa2.34□□□□□ -2.03
SFXN1-202ENST00000421887 A8MWP4 228 aa2.34□□□□□ -2.03
SFXN1-202ENST00000421887 MEIG1Q5JSS6 88 aa2.34□□□□□ -2.03
SFXN1-202ENST00000421887 S100A7L2Q5SY68 101 aa2.34□□□□□ -2.03
SFXN1-202ENST00000421887 CST9LQ9H4G1 147 aa2.34□□□□□ -2.03
SFXN1-202ENST00000421887 A0A0B4J2C4 111 aa2.33□□□□□ -2.04
SFXN1-202ENST00000421887 LOC107984156A0A0G2JMH3 177 aa2.33□□□□□ -2.04
SFXN1-202ENST00000421887 COLCA2A8K830 154 aa2.33□□□□□ -2.04
SFXN1-202ENST00000421887 LINC00587B1AMM8 73 aa2.33□□□□□ -2.04
SFXN1-202ENST00000421887 NDUFA6P56556 154 aa2.33□□□□□ -2.04
SFXN1-202ENST00000421887 ADIRFQ15847 76 aa2.33□□□□□ -2.04
SFXN1-202ENST00000421887 SPINT4Q6UDR6 99 aa2.33□□□□□ -2.04
SFXN1-202ENST00000421887 ARL17AQ8IVW1 177 aa2.33□□□□□ -2.04
SFXN1-202ENST00000421887 Q96NJ1 140 aa2.33□□□□□ -2.04
SFXN1-202ENST00000421887 KRTAP2-1Q9BYU5 128 aa2.33□□□□□ -2.04
SFXN1-202ENST00000421887 BATF3Q9NR55 127 aa2.33□□□□□ -2.04
SFXN1-202ENST00000421887 TRAV23DV6A0A075B6W5 121 aa2.32□□□□□ -2.04
SFXN1-202ENST00000421887 A0A0G2JQZ4 141 aa2.32□□□□□ -2.04
SFXN1-202ENST00000421887 SMIM13P0DJ93 91 aa2.32□□□□□ -2.04
SFXN1-202ENST00000421887 ADCYAP1P18509 176 aa2.32□□□□□ -2.04
SFXN1-202ENST00000421887 SPRR1BP22528 89 aa2.32□□□□□ -2.04
SFXN1-202ENST00000421887 LINC00313P59037 77 aa2.32□□□□□ -2.04
SFXN1-202ENST00000421887 KMT2DO14686 5537 aa2.31□□□□□ -2.04
SFXN1-202ENST00000421887 TRBV10-2A0A0K0K1G8 114 aa2.31□□□□□ -2.04
SFXN1-202ENST00000421887 A8MUU9 505 aa2.31□□□□□ -2.04
SFXN1-202ENST00000421887 H3BQ85 93 aa2.31□□□□□ -2.04
SFXN1-202ENST00000421887 ZNF73O43830 326 aaPredicted RBP2.31□□□□□ -2.04
SFXN1-202ENST00000421887 IGLC3P0DOY3 106 aa2.31□□□□□ -2.04
SFXN1-202ENST00000421887 TMEM170BQ5T4T1 132 aa2.31□□□□□ -2.04
SFXN1-202ENST00000421887 DEFB105AQ8NG35 78 aa2.31□□□□□ -2.04
SFXN1-202ENST00000421887 MIEN1Q9BRT3 115 aa2.31□□□□□ -2.04
SFXN1-202ENST00000421887 ZNF22P17026 224 aaPredicted RBP2.3□□□□□ -2.04
SFXN1-202ENST00000421887 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
SFXN1-202ENST00000421887 NAT8Q9UHE5 227 aa2.3□□□□□ -2.04
SFXN1-202ENST00000421887 TEX49A0A1B0GTD5 131 aa2.29□□□□□ -2.04
SFXN1-202ENST00000421887 SPRR2EP22531 72 aa2.29□□□□□ -2.04
SFXN1-202ENST00000421887 SPRR2BP35325 72 aa2.29□□□□□ -2.04
SFXN1-202ENST00000421887 SPRR2AP35326 72 aa2.29□□□□□ -2.04
SFXN1-202ENST00000421887 IFITM2Q01629 132 aa2.29□□□□□ -2.04
SFXN1-202ENST00000421887 FABP9Q0Z7S8 132 aa2.29□□□□□ -2.04
SFXN1-202ENST00000421887 PMAIP1Q13794 54 aa2.29□□□□□ -2.04
SFXN1-202ENST00000421887 IGFL1Q6UW32 110 aa2.29□□□□□ -2.04
SFXN1-202ENST00000421887 SMCO4Q9NRQ5 59 aa2.28□□□□□ -2.04
SFXN1-202ENST00000421887 SRP19P09132 144 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms